RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 AMHR2Q16671 573 aa9.3□□□□□ -0.92
CDH13-211ENST00000568770 POTEGQ6S5H5 508 aa9.3□□□□□ -0.92
CDH13-211ENST00000568770 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
CDH13-211ENST00000568770 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
CDH13-211ENST00000568770 SAMD9LQ8IVG5 1584 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 CEP170BQ9Y4F5 1589 aaPredicted RBP9.29□□□□□ -0.92
CDH13-211ENST00000568770 ZMYM3Q14202 1370 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
CDH13-211ENST00000568770 OATP04181 439 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
CDH13-211ENST00000568770 LSM11P83369 360 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDH13-211ENST00000568770 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 KRTAP3-3Q9BYR6 98 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 KRTAP3-2Q9BYR7 98 aa9.29□□□□□ -0.92
CDH13-211ENST00000568770 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
CDH13-211ENST00000568770 POTEMA6NI47 508 aa9.28□□□□□ -0.92
CDH13-211ENST00000568770 PARP9Q8IXQ6 854 aa9.28□□□□□ -0.92
CDH13-211ENST00000568770 MED1Q15648 1581 aaPredicted RBP9.28□□□□□ -0.92
CDH13-211ENST00000568770 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
CDH13-211ENST00000568770 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
CDH13-211ENST00000568770 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
CDH13-211ENST00000568770 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
CDH13-211ENST00000568770 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
CDH13-211ENST00000568770 RABGEF1Q9UJ41 708 aa9.27□□□□□ -0.93
CDH13-211ENST00000568770 PLA2R1Q13018 1463 aa9.27□□□□□ -0.93
CDH13-211ENST00000568770 TCOF1Q13428 1488 aaKnown RBP9.27□□□□□ -0.93
CDH13-211ENST00000568770 SYCP2Q9BX26 1530 aa9.26□□□□□ -0.93
CDH13-211ENST00000568770 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
CDH13-211ENST00000568770 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
CDH13-211ENST00000568770 KDM4CQ9H3R0 1056 aa9.26□□□□□ -0.93
CDH13-211ENST00000568770 ATP7AQ04656 1500 aa9.26□□□□□ -0.93
CDH13-211ENST00000568770 PLXNC1O60486 1568 aa9.25□□□□□ -0.93
CDH13-211ENST00000568770 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
CDH13-211ENST00000568770 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
CDH13-211ENST00000568770 NBPF26B4DH59 902 aa9.25□□□□□ -0.93
CDH13-211ENST00000568770 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
CDH13-211ENST00000568770 ADGBQ8N7X0 1667 aa9.25□□□□□ -0.93
CDH13-211ENST00000568770 PTPRKQ15262 1439 aa9.24□□□□□ -0.93
CDH13-211ENST00000568770 CCDC18Q5T9S5 1454 aa9.24□□□□□ -0.93
CDH13-211ENST00000568770 TK2O00142 265 aa9.24□□□□□ -0.93
CDH13-211ENST00000568770 HSPA1LP34931 641 aa9.24□□□□□ -0.93
CDH13-211ENST00000568770 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
CDH13-211ENST00000568770 SPAG9O60271 1321 aaKnown RBP9.24□□□□□ -0.93
CDH13-211ENST00000568770 HRO43593 1189 aa9.23□□□□□ -0.93
CDH13-211ENST00000568770 PIP4K2BP78356 416 aa9.23□□□□□ -0.93
CDH13-211ENST00000568770 TTLL12Q14166 644 aaPredicted RBP9.23□□□□□ -0.93
CDH13-211ENST00000568770 CDAN1Q8IWY9 1227 aa9.23□□□□□ -0.93
CDH13-211ENST00000568770 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
CDH13-211ENST00000568770 A2MP01023 1474 aa9.22□□□□□ -0.93
CDH13-211ENST00000568770 NEURL4Q96JN8 1562 aa9.22□□□□□ -0.93
CDH13-211ENST00000568770 MS4A1P11836 297 aa9.22□□□□□ -0.93
CDH13-211ENST00000568770 HNRNPMP52272 730 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH13-211ENST00000568770 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
CDH13-211ENST00000568770 CPS1P31327 1500 aa9.21□□□□□ -0.93
CDH13-211ENST00000568770 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.93
CDH13-211ENST00000568770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
CDH13-211ENST00000568770 GGT6Q6P531 493 aa9.21□□□□□ -0.94
CDH13-211ENST00000568770 FAM117AQ9C073 453 aa9.21□□□□□ -0.94
CDH13-211ENST00000568770 GPCPD1Q9NPB8 672 aa9.21□□□□□ -0.94
CDH13-211ENST00000568770 A2ML1A8K2U0 1454 aa9.21□□□□□ -0.94
CDH13-211ENST00000568770 TOM1O60784 492 aa9.2□□□□□ -0.94
CDH13-211ENST00000568770 CLCN1P35523 988 aa9.2□□□□□ -0.94
CDH13-211ENST00000568770 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
CDH13-211ENST00000568770 DNAJB2P25686 324 aa9.19□□□□□ -0.94
CDH13-211ENST00000568770 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
CDH13-211ENST00000568770 SHANK2Q9UPX8 1470 aa9.19□□□□□ -0.94
CDH13-211ENST00000568770 ALKQ9UM73 1620 aa9.19□□□□□ -0.94
CDH13-211ENST00000568770 STRCP1A6NGW2 1772 aa9.19□□□□□ -0.94
CDH13-211ENST00000568770 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
CDH13-211ENST00000568770 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
CDH13-211ENST00000568770 PLEKHH2Q8IVE3 1493 aa9.18□□□□□ -0.94
CDH13-211ENST00000568770 VWDEQ8N2E2 1590 aa9.18□□□□□ -0.94
CDH13-211ENST00000568770 FYCO1Q9BQS8 1478 aa9.18□□□□□ -0.94
CDH13-211ENST00000568770 FAM217BQ9NTX9 383 aaPredicted RBP9.18□□□□□ -0.94
CDH13-211ENST00000568770 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
CDH13-211ENST00000568770 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
CDH13-211ENST00000568770 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
CDH13-211ENST00000568770 IQGAP1P46940 1657 aa9.16□□□□□ -0.94
CDH13-211ENST00000568770 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
CDH13-211ENST00000568770 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
CDH13-211ENST00000568770 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
CDH13-211ENST00000568770 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
CDH13-211ENST00000568770 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
CDH13-211ENST00000568770 DEPDC5O75140 1603 aa9.16□□□□□ -0.94
CDH13-211ENST00000568770 FBXO31Q5XUX0 539 aaPredicted RBP9.15□□□□□ -0.94
CDH13-211ENST00000568770 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
CDH13-211ENST00000568770 LAPTM4BQ86VI4 370 aa9.15□□□□□ -0.94
CDH13-211ENST00000568770 CFAP65Q6ZU64 1925 aaKnown RBP9.15□□□□□ -0.95
CDH13-211ENST00000568770 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
CDH13-211ENST00000568770 TNRQ92752 1358 aa9.14□□□□□ -0.95
CDH13-211ENST00000568770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH13-211ENST00000568770 PZPP20742 1482 aa9.14□□□□□ -0.95
CDH13-211ENST00000568770 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
CDH13-211ENST00000568770 ZNF644Q9H582 1327 aaPredicted RBP9.13□□□□□ -0.95
CDH13-211ENST00000568770 TIAM1Q13009 1591 aa9.13□□□□□ -0.95
CDH13-211ENST00000568770 UGGT1Q9NYU2 1555 aa9.13□□□□□ -0.95
CDH13-211ENST00000568770 XIRP1Q702N8 1843 aaKnown RBP9.13□□□□□ -0.95
CDH13-211ENST00000568770 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
CDH13-211ENST00000568770 SLC10A3P09131 477 aa9.13□□□□□ -0.95
CDH13-211ENST00000568770 ANKLE2Q86XL3 938 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms