RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 QRICH2Q9H0J4 1663 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
TCF4-241ENST00000568740 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
TCF4-241ENST00000568740 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 NEFLP07196 543 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 TMCO4Q5TGY1 634 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 EID1Q9Y6B2 187 aa11.37□□□□□ -0.59
TCF4-241ENST00000568740 MYOM1P52179 1685 aa11.36□□□□□ -0.59
TCF4-241ENST00000568740 MTHFSP49914 203 aa11.36□□□□□ -0.59
TCF4-241ENST00000568740 KDM5AP29375 1690 aaKnown RBP11.36□□□□□ -0.59
TCF4-241ENST00000568740 FAM177A1Q8N128 213 aaPredicted RBP11.36□□□□□ -0.59
TCF4-241ENST00000568740 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
TCF4-241ENST00000568740 SOX12O15370 315 aa11.35□□□□□ -0.59
TCF4-241ENST00000568740 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
TCF4-241ENST00000568740 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
TCF4-241ENST00000568740 AMOTL2Q9Y2J4 779 aa11.35□□□□□ -0.59
TCF4-241ENST00000568740 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
TCF4-241ENST00000568740 LRPPRCP42704 1394 aaKnown RBP11.35□□□□□ -0.59
TCF4-241ENST00000568740 ROBO2Q9HCK4 1378 aa11.35□□□□□ -0.59
TCF4-241ENST00000568740 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
TCF4-241ENST00000568740 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
TCF4-241ENST00000568740 CGNL1Q0VF96 1302 aa11.33□□□□□ -0.6
TCF4-241ENST00000568740 APAF1O14727 1248 aa11.33□□□□□ -0.6
TCF4-241ENST00000568740 FYB1O15117 783 aa11.33□□□□□ -0.6
TCF4-241ENST00000568740 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
TCF4-241ENST00000568740 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
TCF4-241ENST00000568740 WASLO00401 505 aaPredicted RBP11.33□□□□□ -0.6
TCF4-241ENST00000568740 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
TCF4-241ENST00000568740 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
TCF4-241ENST00000568740 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
TCF4-241ENST00000568740 NME9Q86XW9 330 aa11.31□□□□□ -0.6
TCF4-241ENST00000568740 GPBP1L1Q9HC44 474 aaPredicted RBP11.31□□□□□ -0.6
TCF4-241ENST00000568740 ADAMTS13Q76LX8 1427 aa11.31□□□□□ -0.6
TCF4-241ENST00000568740 KCNA6P17658 529 aa11.31□□□□□ -0.6
TCF4-241ENST00000568740 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
TCF4-241ENST00000568740 TERF2IPQ9NYB0 399 aa11.31□□□□□ -0.6
TCF4-241ENST00000568740 ABCC11Q96J66 1382 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 PRR36Q9H6K5 1346 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 ANKRD36BQ8N2N9 1353 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 C3P01024 1663 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
TCF4-241ENST00000568740 HDGFL2Q7Z4V5 671 aaPredicted RBP11.3□□□□□ -0.6
TCF4-241ENST00000568740 NUDCQ9Y266 331 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
TCF4-241ENST00000568740 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
TCF4-241ENST00000568740 PLIN1O60240 522 aa11.29□□□□□ -0.6
TCF4-241ENST00000568740 MYO3AQ8NEV4 1616 aa11.29□□□□□ -0.6
TCF4-241ENST00000568740 NRXN3Q9Y4C0 1643 aa11.29□□□□□ -0.6
TCF4-241ENST00000568740 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
TCF4-241ENST00000568740 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
TCF4-241ENST00000568740 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
TCF4-241ENST00000568740 UBR1Q8IWV7 1749 aa11.28□□□□□ -0.6
TCF4-241ENST00000568740 FER1L4A9Z1Z3 1794 aa11.28□□□□□ -0.6
TCF4-241ENST00000568740 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
TCF4-241ENST00000568740 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
TCF4-241ENST00000568740 BCL11BQ9C0K0 894 aaPredicted RBP11.28□□□□□ -0.6
TCF4-241ENST00000568740 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.6
TCF4-241ENST00000568740 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.6
TCF4-241ENST00000568740 E9PSI1 815 aa11.27□□□□□ -0.61
TCF4-241ENST00000568740 HSPA2P54652 639 aa11.27□□□□□ -0.61
TCF4-241ENST00000568740 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
TCF4-241ENST00000568740 CD163L1Q9NR16 1453 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 TRAIPQ9BWF2 469 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
TCF4-241ENST00000568740 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
TCF4-241ENST00000568740 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
TCF4-241ENST00000568740 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
TCF4-241ENST00000568740 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
TCF4-241ENST00000568740 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
TCF4-241ENST00000568740 ACEP12821 1306 aa11.24□□□□□ -0.61
TCF4-241ENST00000568740 TBX22Q9Y458 520 aa11.24□□□□□ -0.61
TCF4-241ENST00000568740 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
TCF4-241ENST00000568740 GTPBP6O43824 516 aaPredicted RBP11.23□□□□□ -0.61
TCF4-241ENST00000568740 HMOX1P09601 288 aa11.23□□□□□ -0.61
TCF4-241ENST00000568740 HS6ST3Q8IZP7 471 aa11.23□□□□□ -0.61
TCF4-241ENST00000568740 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
TCF4-241ENST00000568740 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
TCF4-241ENST00000568740 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
TCF4-241ENST00000568740 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
TCF4-241ENST00000568740 NGDNQ8NEJ9 315 aaKnown RBP11.22□□□□□ -0.61
TCF4-241ENST00000568740 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
TCF4-241ENST00000568740 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
TCF4-241ENST00000568740 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
TCF4-241ENST00000568740 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
TCF4-241ENST00000568740 BLMP54132 1417 aaPredicted RBP11.21□□□□□ -0.62
TCF4-241ENST00000568740 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.62
TCF4-241ENST00000568740 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
TCF4-241ENST00000568740 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
TCF4-241ENST00000568740 BCCIPQ9P287 314 aaKnown RBP eCLIP11.2□□□□□ -0.62
TCF4-241ENST00000568740 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
TCF4-241ENST00000568740 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
TCF4-241ENST00000568740 DUSP27Q5VZP5 1158 aa11.19□□□□□ -0.62
TCF4-241ENST00000568740 COG3Q96JB2 828 aa11.19□□□□□ -0.62
TCF4-241ENST00000568740 WDR70Q9NW82 654 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms