RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
CDH16-207ENST00000568632 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.87
CDH16-207ENST00000568632 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
CDH16-207ENST00000568632 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
CDH16-207ENST00000568632 TMEM94Q12767 1356 aa20.49■□□□□ 0.87
CDH16-207ENST00000568632 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
CDH16-207ENST00000568632 ZNF335Q9H4Z2 1342 aaPredicted RBP20.49■□□□□ 0.87
CDH16-207ENST00000568632 NSD2O96028 1365 aa20.48■□□□□ 0.87
CDH16-207ENST00000568632 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
CDH16-207ENST00000568632 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
CDH16-207ENST00000568632 IPO9Q96P70 1041 aaKnown RBP20.48■□□□□ 0.87
CDH16-207ENST00000568632 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
CDH16-207ENST00000568632 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
CDH16-207ENST00000568632 NME9Q86XW9 330 aa20.48■□□□□ 0.87
CDH16-207ENST00000568632 RNF123Q5XPI4 1314 aa20.48■□□□□ 0.87
CDH16-207ENST00000568632 ANKARQ7Z5J8 1434 aa20.48■□□□□ 0.87
CDH16-207ENST00000568632 NGDNQ8NEJ9 315 aaKnown RBP20.47■□□□□ 0.87
CDH16-207ENST00000568632 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
CDH16-207ENST00000568632 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
CDH16-207ENST00000568632 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
CDH16-207ENST00000568632 SENP3-EIF4A1A0A087X0R7 540 aa20.46■□□□□ 0.87
CDH16-207ENST00000568632 USP6P35125 1406 aa20.44■□□□□ 0.86
CDH16-207ENST00000568632 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
CDH16-207ENST00000568632 C19orf44Q9H6X5 657 aa20.44■□□□□ 0.86
CDH16-207ENST00000568632 ANP32AP39687 249 aaKnown RBP20.44■□□□□ 0.86
CDH16-207ENST00000568632 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
CDH16-207ENST00000568632 FBLN1P23142 703 aa20.43■□□□□ 0.86
CDH16-207ENST00000568632 ANKRD26Q9UPS8 1709 aa20.42■□□□□ 0.86
CDH16-207ENST00000568632 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
CDH16-207ENST00000568632 ORAI2Q96SN7 254 aa20.42■□□□□ 0.86
CDH16-207ENST00000568632 PHF8Q9UPP1 1060 aa20.42■□□□□ 0.86
CDH16-207ENST00000568632 NRKQ7Z2Y5 1582 aa20.41■□□□□ 0.86
CDH16-207ENST00000568632 MTHFSP49914 203 aa20.41■□□□□ 0.86
CDH16-207ENST00000568632 NUDCQ9Y266 331 aa20.41■□□□□ 0.86
CDH16-207ENST00000568632 CCDC136Q96JN2 1154 aa20.41■□□□□ 0.86
CDH16-207ENST00000568632 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
CDH16-207ENST00000568632 ATF3P18847 181 aa20.38■□□□□ 0.85
CDH16-207ENST00000568632 SSH2Q76I76 1423 aa20.38■□□□□ 0.85
CDH16-207ENST00000568632 LRRC7Q96NW7 1537 aa20.37■□□□□ 0.85
CDH16-207ENST00000568632 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
CDH16-207ENST00000568632 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
CDH16-207ENST00000568632 COG3Q96JB2 828 aa20.37■□□□□ 0.85
CDH16-207ENST00000568632 DMRT2Q9Y5R5 561 aa20.37■□□□□ 0.85
CDH16-207ENST00000568632 ADAMTS8Q9UP79 889 aa20.36■□□□□ 0.85
CDH16-207ENST00000568632 C1orf167Q5SNV9 1468 aa20.35■□□□□ 0.85
CDH16-207ENST00000568632 FOXO3O43524 673 aa20.35■□□□□ 0.85
CDH16-207ENST00000568632 WDR43Q15061 677 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDH16-207ENST00000568632 NCOA3Q9Y6Q9 1424 aa20.35■□□□□ 0.85
CDH16-207ENST00000568632 MSH6P52701 1360 aa20.34■□□□□ 0.85
CDH16-207ENST00000568632 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
CDH16-207ENST00000568632 MST1RQ04912 1400 aa20.34■□□□□ 0.85
CDH16-207ENST00000568632 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
CDH16-207ENST00000568632 NUTM2GQ5VZR2 741 aa20.33■□□□□ 0.85
CDH16-207ENST00000568632 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.84
CDH16-207ENST00000568632 SOX12O15370 315 aa20.32■□□□□ 0.84
CDH16-207ENST00000568632 PSME1Q06323 249 aa20.32■□□□□ 0.84
CDH16-207ENST00000568632 CADPS2Q86UW7 1296 aa20.32■□□□□ 0.84
CDH16-207ENST00000568632 DCCP43146 1447 aa20.32■□□□□ 0.84
CDH16-207ENST00000568632 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
CDH16-207ENST00000568632 POLKQ9UBT6 870 aa20.31■□□□□ 0.84
CDH16-207ENST00000568632 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
CDH16-207ENST00000568632 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
CDH16-207ENST00000568632 PIK3C2AO00443 1686 aa20.31■□□□□ 0.84
CDH16-207ENST00000568632 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
CDH16-207ENST00000568632 EMILIN1Q9Y6C2 1016 aa20.3■□□□□ 0.84
CDH16-207ENST00000568632 CFAP53Q96M91 514 aa20.3■□□□□ 0.84
CDH16-207ENST00000568632 ABTB2Q8N961 1025 aa20.29■□□□□ 0.84
CDH16-207ENST00000568632 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
CDH16-207ENST00000568632 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
CDH16-207ENST00000568632 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
CDH16-207ENST00000568632 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
CDH16-207ENST00000568632 NLRP6P59044 892 aa20.28■□□□□ 0.84
CDH16-207ENST00000568632 CCDC146Q8IYE0 955 aa20.27■□□□□ 0.84
CDH16-207ENST00000568632 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
CDH16-207ENST00000568632 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
CDH16-207ENST00000568632 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
CDH16-207ENST00000568632 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
CDH16-207ENST00000568632 IL27Q8NEV9 243 aa20.24■□□□□ 0.83
CDH16-207ENST00000568632 KIF1AQ12756 1690 aa20.24■□□□□ 0.83
CDH16-207ENST00000568632 USP31Q70CQ4 1352 aa20.24■□□□□ 0.83
CDH16-207ENST00000568632 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
CDH16-207ENST00000568632 LMOD2Q6P5Q4 547 aa20.23■□□□□ 0.83
CDH16-207ENST00000568632 PNPLA6Q8IY17 1366 aa20.23■□□□□ 0.83
CDH16-207ENST00000568632 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
CDH16-207ENST00000568632 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
CDH16-207ENST00000568632 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
CDH16-207ENST00000568632 U2AF1L5P0DN76 240 aaPredicted RBP20.21■□□□□ 0.83
CDH16-207ENST00000568632 U2AF1Q01081 240 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDH16-207ENST00000568632 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
CDH16-207ENST00000568632 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
CDH16-207ENST00000568632 INSRP06213 1382 aa20.19■□□□□ 0.82
CDH16-207ENST00000568632 CDK12Q9NYV4 1490 aaPredicted RBP20.19■□□□□ 0.82
CDH16-207ENST00000568632 MAP3K19Q56UN5 1328 aa20.18■□□□□ 0.82
CDH16-207ENST00000568632 USP35Q9P2H5 1018 aa20.18■□□□□ 0.82
CDH16-207ENST00000568632 TRPM3Q9HCF6 1732 aaPredicted RBP20.18■□□□□ 0.82
CDH16-207ENST00000568632 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
CDH16-207ENST00000568632 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
CDH16-207ENST00000568632 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
CDH16-207ENST00000568632 LTBP4Q8N2S1 1624 aa20.17■□□□□ 0.82
CDH16-207ENST00000568632 APAF1O14727 1248 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms