RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 TRPM3Q9HCF6 1732 aaPredicted RBP21.45■■□□□ 1.02
CCNDBP1-213ENST00000568507 CCDC125Q86Z20 511 aa21.45■■□□□ 1.02
CCNDBP1-213ENST00000568507 CABP2Q9NPB3 220 aa21.45■■□□□ 1.02
CCNDBP1-213ENST00000568507 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
CCNDBP1-213ENST00000568507 PRDM11Q9NQV5 511 aa21.43■■□□□ 1.02
CCNDBP1-213ENST00000568507 POLR3AO14802 1390 aaPredicted RBP21.43■■□□□ 1.02
CCNDBP1-213ENST00000568507 ITSN1Q15811 1721 aa21.42■■□□□ 1.02
CCNDBP1-213ENST00000568507 GLI3P10071 1580 aa21.42■■□□□ 1.02
CCNDBP1-213ENST00000568507 ALS2Q96Q42 1657 aa21.42■■□□□ 1.02
CCNDBP1-213ENST00000568507 A0A0G2JS52 829 aa21.42■■□□□ 1.02
CCNDBP1-213ENST00000568507 MYT1Q01538 1121 aa21.42■■□□□ 1.02
CCNDBP1-213ENST00000568507 ONECUT3O60422 494 aaPredicted RBP21.41■■□□□ 1.02
CCNDBP1-213ENST00000568507 ABTB2Q8N961 1025 aa21.41■■□□□ 1.02
CCNDBP1-213ENST00000568507 ABCA3Q99758 1704 aa21.4■■□□□ 1.02
CCNDBP1-213ENST00000568507 ROCK2O75116 1388 aaKnown RBP21.4■■□□□ 1.02
CCNDBP1-213ENST00000568507 NWD2Q9ULI1 1742 aa21.4■■□□□ 1.02
CCNDBP1-213ENST00000568507 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.02
CCNDBP1-213ENST00000568507 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.02
CCNDBP1-213ENST00000568507 PPIP5K1Q6PFW1 1433 aa21.39■■□□□ 1.01
CCNDBP1-213ENST00000568507 FAM98CQ17RN3 349 aaKnown RBP21.38■■□□□ 1.01
CCNDBP1-213ENST00000568507 EVC2Q86UK5 1308 aa21.38■■□□□ 1.01
CCNDBP1-213ENST00000568507 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
CCNDBP1-213ENST00000568507 KIAA0232Q92628 1395 aa21.37■■□□□ 1.01
CCNDBP1-213ENST00000568507 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
CCNDBP1-213ENST00000568507 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
CCNDBP1-213ENST00000568507 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
CCNDBP1-213ENST00000568507 SF3B2Q13435 895 aaKnown RBP21.36■■□□□ 1.01
CCNDBP1-213ENST00000568507 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
CCNDBP1-213ENST00000568507 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
CCNDBP1-213ENST00000568507 STRN4Q9NRL3 753 aa21.34■■□□□ 1.01
CCNDBP1-213ENST00000568507 SPATA31A5Q5VU36 1347 aa21.33■■□□□ 1.01
CCNDBP1-213ENST00000568507 SPATA31A7Q8IWB4 1347 aa21.33■■□□□ 1.01
CCNDBP1-213ENST00000568507 EVA1CP58658 441 aa21.33■■□□□ 1
CCNDBP1-213ENST00000568507 BLMP54132 1417 aaPredicted RBP21.32■■□□□ 1
CCNDBP1-213ENST00000568507 ZRANB1Q9UGI0 708 aa21.32■■□□□ 1
CCNDBP1-213ENST00000568507 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
CCNDBP1-213ENST00000568507 EP400Q96L91 3159 aa21.31■■□□□ 1
CCNDBP1-213ENST00000568507 TRPM1Q7Z4N2 1603 aa21.31■■□□□ 1
CCNDBP1-213ENST00000568507 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
CCNDBP1-213ENST00000568507 TRIM26Q12899 539 aaPredicted RBP21.31■■□□□ 1
CCNDBP1-213ENST00000568507 TONSLQ96HA7 1378 aa21.3■■□□□ 1
CCNDBP1-213ENST00000568507 NRAPQ86VF7 1730 aa21.29■■□□□ 1
CCNDBP1-213ENST00000568507 GCP02774 474 aa21.29■■□□□ 1
CCNDBP1-213ENST00000568507 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
CCNDBP1-213ENST00000568507 USP19O94966 1318 aa21.28■■□□□ 1
CCNDBP1-213ENST00000568507 NLRP6P59044 892 aa21.28■■□□□ 1
CCNDBP1-213ENST00000568507 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
CCNDBP1-213ENST00000568507 CRYBG1Q9Y4K1 1723 aa21.28■■□□□ 1
CCNDBP1-213ENST00000568507 SPATA31A1Q5TZJ5 1347 aa21.27■■□□□ 1
CCNDBP1-213ENST00000568507 USP6P35125 1406 aa21.26■□□□□ 0.99
CCNDBP1-213ENST00000568507 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
CCNDBP1-213ENST00000568507 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
CCNDBP1-213ENST00000568507 PHRF1Q9P1Y6 1649 aaKnown RBP21.26■□□□□ 0.99
CCNDBP1-213ENST00000568507 BRWD3Q6RI45 1802 aa21.26■□□□□ 0.99
CCNDBP1-213ENST00000568507 DEFB132Q7Z7B7 95 aa21.25■□□□□ 0.99
CCNDBP1-213ENST00000568507 CPDO75976 1380 aa21.25■□□□□ 0.99
CCNDBP1-213ENST00000568507 LARP1Q6PKG0 1096 aaKnown RBP21.23■□□□□ 0.99
CCNDBP1-213ENST00000568507 FAM182BQ5T319 152 aa21.22■□□□□ 0.99
CCNDBP1-213ENST00000568507 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
CCNDBP1-213ENST00000568507 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
CCNDBP1-213ENST00000568507 BAG6P46379 1132 aa21.21■□□□□ 0.99
CCNDBP1-213ENST00000568507 NRKQ7Z2Y5 1582 aa21.21■□□□□ 0.99
CCNDBP1-213ENST00000568507 BARGINQ6ZT62 677 aa21.2■□□□□ 0.98
CCNDBP1-213ENST00000568507 TCP11L2Q8N4U5 519 aa21.2■□□□□ 0.98
CCNDBP1-213ENST00000568507 PDE3BQ13370 1112 aa21.19■□□□□ 0.98
CCNDBP1-213ENST00000568507 CAMTA1Q9Y6Y1 1673 aa21.18■□□□□ 0.98
CCNDBP1-213ENST00000568507 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
CCNDBP1-213ENST00000568507 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
CCNDBP1-213ENST00000568507 KCNH5Q8NCM2 988 aa21.17■□□□□ 0.98
CCNDBP1-213ENST00000568507 THRAP3Q9Y2W1 955 aaKnown RBP21.17■□□□□ 0.98
CCNDBP1-213ENST00000568507 KTN1Q86UP2 1357 aaKnown RBP21.17■□□□□ 0.98
CCNDBP1-213ENST00000568507 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
CCNDBP1-213ENST00000568507 FAM196AQ6ZSG2 479 aa21.16■□□□□ 0.98
CCNDBP1-213ENST00000568507 AATKQ6ZMQ8 1374 aa21.14■□□□□ 0.98
CCNDBP1-213ENST00000568507 SOX12O15370 315 aa21.14■□□□□ 0.98
CCNDBP1-213ENST00000568507 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.97
CCNDBP1-213ENST00000568507 THSD7AQ9UPZ6 1657 aa21.14■□□□□ 0.97
CCNDBP1-213ENST00000568507 HDGFL2Q7Z4V5 671 aaPredicted RBP21.13■□□□□ 0.97
CCNDBP1-213ENST00000568507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCNDBP1-213ENST00000568507 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
CCNDBP1-213ENST00000568507 SLIT3O75094 1523 aa21.13■□□□□ 0.97
CCNDBP1-213ENST00000568507 EN1Q05925 392 aaPredicted RBP21.12■□□□□ 0.97
CCNDBP1-213ENST00000568507 TOM1L2Q6ZVM7 507 aa21.12■□□□□ 0.97
CCNDBP1-213ENST00000568507 TRIM37O94972 964 aa21.11■□□□□ 0.97
CCNDBP1-213ENST00000568507 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
CCNDBP1-213ENST00000568507 LMO7Q8WWI1 1683 aa21.11■□□□□ 0.97
CCNDBP1-213ENST00000568507 CRB1P82279 1406 aa21.11■□□□□ 0.97
CCNDBP1-213ENST00000568507 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
CCNDBP1-213ENST00000568507 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
CCNDBP1-213ENST00000568507 SLC12A5Q9H2X9 1139 aa21.1■□□□□ 0.97
CCNDBP1-213ENST00000568507 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
CCNDBP1-213ENST00000568507 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
CCNDBP1-213ENST00000568507 CSB-PGBD3P0DP91 1061 aa21.09■□□□□ 0.97
CCNDBP1-213ENST00000568507 AXIN2Q9Y2T1 843 aa21.09■□□□□ 0.97
CCNDBP1-213ENST00000568507 ST20-MTHFSA0A0A6YYL1 179 aa21.08■□□□□ 0.96
CCNDBP1-213ENST00000568507 APBA3O96018 575 aa21.08■□□□□ 0.96
CCNDBP1-213ENST00000568507 SRCAPQ6ZRS2 3230 aa21.07■□□□□ 0.96
CCNDBP1-213ENST00000568507 WDR17Q8IZU2 1322 aa21.06■□□□□ 0.96
CCNDBP1-213ENST00000568507 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
CCNDBP1-213ENST00000568507 C11orf95C9JLR9 678 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms