RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
CMTM3-215ENST00000568477 GJD4Q96KN9 370 aaPredicted RBP20.65■□□□□ 0.9
CMTM3-215ENST00000568477 TONSLQ96HA7 1378 aa20.64■□□□□ 0.89
CMTM3-215ENST00000568477 CABP2Q9NPB3 220 aa20.63■□□□□ 0.89
CMTM3-215ENST00000568477 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
CMTM3-215ENST00000568477 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
CMTM3-215ENST00000568477 PLCH1Q4KWH8 1693 aa20.61■□□□□ 0.89
CMTM3-215ENST00000568477 RALGAPBQ86X10 1494 aa20.61■□□□□ 0.89
CMTM3-215ENST00000568477 NWD2Q9ULI1 1742 aa20.61■□□□□ 0.89
CMTM3-215ENST00000568477 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
CMTM3-215ENST00000568477 FAM83GA6ND36 823 aa20.6■□□□□ 0.89
CMTM3-215ENST00000568477 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
CMTM3-215ENST00000568477 VPS72Q15906 364 aa20.59■□□□□ 0.89
CMTM3-215ENST00000568477 GLI3P10071 1580 aa20.59■□□□□ 0.89
CMTM3-215ENST00000568477 CRYBG1Q9Y4K1 1723 aa20.58■□□□□ 0.88
CMTM3-215ENST00000568477 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
CMTM3-215ENST00000568477 COL14A1Q05707 1796 aaKnown RBP20.57■□□□□ 0.88
CMTM3-215ENST00000568477 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
CMTM3-215ENST00000568477 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
CMTM3-215ENST00000568477 PRDM11Q9NQV5 511 aa20.55■□□□□ 0.88
CMTM3-215ENST00000568477 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
CMTM3-215ENST00000568477 CABP1Q9NZU7 370 aa20.55■□□□□ 0.88
CMTM3-215ENST00000568477 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-215ENST00000568477 ABTB2Q8N961 1025 aa20.54■□□□□ 0.88
CMTM3-215ENST00000568477 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
CMTM3-215ENST00000568477 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
CMTM3-215ENST00000568477 KIAA0232Q92628 1395 aa20.52■□□□□ 0.88
CMTM3-215ENST00000568477 SBNO2Q9Y2G9 1366 aa20.51■□□□□ 0.87
CMTM3-215ENST00000568477 USP6P35125 1406 aa20.51■□□□□ 0.87
CMTM3-215ENST00000568477 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
CMTM3-215ENST00000568477 USP19O94966 1318 aa20.5■□□□□ 0.87
CMTM3-215ENST00000568477 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
CMTM3-215ENST00000568477 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
CMTM3-215ENST00000568477 NRKQ7Z2Y5 1582 aa20.48■□□□□ 0.87
CMTM3-215ENST00000568477 CHRNA2Q15822 529 aa20.48■□□□□ 0.87
CMTM3-215ENST00000568477 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-215ENST00000568477 A0A0G2JS52 829 aa20.46■□□□□ 0.87
CMTM3-215ENST00000568477 MYT1Q01538 1121 aa20.46■□□□□ 0.87
CMTM3-215ENST00000568477 SPATA31A5Q5VU36 1347 aa20.46■□□□□ 0.87
CMTM3-215ENST00000568477 SPATA31A7Q8IWB4 1347 aa20.46■□□□□ 0.87
CMTM3-215ENST00000568477 FAM98CQ17RN3 349 aaKnown RBP20.45■□□□□ 0.86
CMTM3-215ENST00000568477 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-215ENST00000568477 CPDO75976 1380 aa20.45■□□□□ 0.86
CMTM3-215ENST00000568477 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
CMTM3-215ENST00000568477 BRWD3Q6RI45 1802 aa20.44■□□□□ 0.86
CMTM3-215ENST00000568477 NLRP6P59044 892 aa20.44■□□□□ 0.86
CMTM3-215ENST00000568477 GCP02774 474 aa20.43■□□□□ 0.86
CMTM3-215ENST00000568477 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
CMTM3-215ENST00000568477 EP400Q96L91 3159 aa20.42■□□□□ 0.86
CMTM3-215ENST00000568477 KRT27Q7Z3Y8 459 aa20.42■□□□□ 0.86
CMTM3-215ENST00000568477 STRN4Q9NRL3 753 aa20.42■□□□□ 0.86
CMTM3-215ENST00000568477 TTC21BQ7Z4L5 1316 aa20.41■□□□□ 0.86
CMTM3-215ENST00000568477 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
CMTM3-215ENST00000568477 AKAP12Q02952 1782 aa20.41■□□□□ 0.86
CMTM3-215ENST00000568477 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
CMTM3-215ENST00000568477 SLIT3O75094 1523 aa20.4■□□□□ 0.86
CMTM3-215ENST00000568477 EVA1CP58658 441 aa20.4■□□□□ 0.86
CMTM3-215ENST00000568477 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
CMTM3-215ENST00000568477 SPATA31A1Q5TZJ5 1347 aa20.39■□□□□ 0.85
CMTM3-215ENST00000568477 TTC21AQ8NDW8 1320 aa20.39■□□□□ 0.85
CMTM3-215ENST00000568477 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
CMTM3-215ENST00000568477 BLMP54132 1417 aaPredicted RBP20.38■□□□□ 0.85
CMTM3-215ENST00000568477 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
CMTM3-215ENST00000568477 LMO7Q8WWI1 1683 aa20.38■□□□□ 0.85
CMTM3-215ENST00000568477 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
CMTM3-215ENST00000568477 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
CMTM3-215ENST00000568477 THSD7AQ9UPZ6 1657 aa20.36■□□□□ 0.85
CMTM3-215ENST00000568477 CLSPNQ9HAW4 1339 aa20.36■□□□□ 0.85
CMTM3-215ENST00000568477 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
CMTM3-215ENST00000568477 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
CMTM3-215ENST00000568477 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
CMTM3-215ENST00000568477 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
CMTM3-215ENST00000568477 SLC24A1O60721 1099 aa20.34■□□□□ 0.85
CMTM3-215ENST00000568477 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
CMTM3-215ENST00000568477 LARP1Q6PKG0 1096 aaKnown RBP20.34■□□□□ 0.85
CMTM3-215ENST00000568477 HDGFL2Q7Z4V5 671 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-215ENST00000568477 TESK2Q96S53 571 aa20.34■□□□□ 0.85
CMTM3-215ENST00000568477 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
CMTM3-215ENST00000568477 COL5A2P05997 1499 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-215ENST00000568477 CD163L1Q9NR16 1453 aa20.33■□□□□ 0.85
CMTM3-215ENST00000568477 KCNH5Q8NCM2 988 aa20.33■□□□□ 0.85
CMTM3-215ENST00000568477 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
CMTM3-215ENST00000568477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
CMTM3-215ENST00000568477 SLC12A5Q9H2X9 1139 aa20.32■□□□□ 0.84
CMTM3-215ENST00000568477 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
CMTM3-215ENST00000568477 USP47Q96K76 1375 aa20.32■□□□□ 0.84
CMTM3-215ENST00000568477 BARGINQ6ZT62 677 aa20.31■□□□□ 0.84
CMTM3-215ENST00000568477 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
CMTM3-215ENST00000568477 SOX12O15370 315 aa20.3■□□□□ 0.84
CMTM3-215ENST00000568477 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
CMTM3-215ENST00000568477 EDC4Q6P2E9 1401 aaKnown RBP20.29■□□□□ 0.84
CMTM3-215ENST00000568477 ARHGEF25Q86VW2 580 aa20.29■□□□□ 0.84
CMTM3-215ENST00000568477 A0A1W2PP64 1363 aa20.29■□□□□ 0.84
CMTM3-215ENST00000568477 USP31Q70CQ4 1352 aa20.29■□□□□ 0.84
CMTM3-215ENST00000568477 CRB1P82279 1406 aa20.28■□□□□ 0.84
CMTM3-215ENST00000568477 FAM182BQ5T319 152 aa20.28■□□□□ 0.84
CMTM3-215ENST00000568477 NME9Q86XW9 330 aa20.28■□□□□ 0.84
CMTM3-215ENST00000568477 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
CMTM3-215ENST00000568477 NFAT5O94916 1531 aa20.27■□□□□ 0.84
CMTM3-215ENST00000568477 DEFB132Q7Z7B7 95 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms