RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-219ENST00000568382 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
SCAPER-219ENST00000568382 MARF1Q9Y4F3 1742 aaKnown RBP17.4■□□□□ 0.38
SCAPER-219ENST00000568382 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
SCAPER-219ENST00000568382 SBNO2Q9Y2G9 1366 aa17.39■□□□□ 0.37
SCAPER-219ENST00000568382 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
SCAPER-219ENST00000568382 SOCS7O14512 581 aa17.37■□□□□ 0.37
SCAPER-219ENST00000568382 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
SCAPER-219ENST00000568382 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
SCAPER-219ENST00000568382 TESK2Q96S53 571 aa17.36■□□□□ 0.37
SCAPER-219ENST00000568382 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
SCAPER-219ENST00000568382 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
SCAPER-219ENST00000568382 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
SCAPER-219ENST00000568382 USP21Q9UK80 565 aa17.35■□□□□ 0.37
SCAPER-219ENST00000568382 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
SCAPER-219ENST00000568382 USP47Q96K76 1375 aa17.32■□□□□ 0.36
SCAPER-219ENST00000568382 RXRBP28702 533 aa17.32■□□□□ 0.36
SCAPER-219ENST00000568382 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
SCAPER-219ENST00000568382 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
SCAPER-219ENST00000568382 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
SCAPER-219ENST00000568382 CRYBG1Q9Y4K1 1723 aa17.32■□□□□ 0.36
SCAPER-219ENST00000568382 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
SCAPER-219ENST00000568382 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
SCAPER-219ENST00000568382 ABTB2Q8N961 1025 aa17.31■□□□□ 0.36
SCAPER-219ENST00000568382 USP6P35125 1406 aa17.3■□□□□ 0.36
SCAPER-219ENST00000568382 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
SCAPER-219ENST00000568382 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
SCAPER-219ENST00000568382 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
SCAPER-219ENST00000568382 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
SCAPER-219ENST00000568382 SLC24A1O60721 1099 aa17.29■□□□□ 0.36
SCAPER-219ENST00000568382 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
SCAPER-219ENST00000568382 SLIT2O94813 1529 aa17.29■□□□□ 0.36
SCAPER-219ENST00000568382 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
SCAPER-219ENST00000568382 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
SCAPER-219ENST00000568382 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
SCAPER-219ENST00000568382 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
SCAPER-219ENST00000568382 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
SCAPER-219ENST00000568382 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
SCAPER-219ENST00000568382 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
SCAPER-219ENST00000568382 PHRF1Q9P1Y6 1649 aaKnown RBP17.26■□□□□ 0.35
SCAPER-219ENST00000568382 NLRP13Q86W25 1043 aa17.26■□□□□ 0.35
SCAPER-219ENST00000568382 ATRNO75882 1429 aa17.26■□□□□ 0.35
SCAPER-219ENST00000568382 PLCH1Q4KWH8 1693 aa17.26■□□□□ 0.35
SCAPER-219ENST00000568382 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
SCAPER-219ENST00000568382 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.25■□□□□ 0.35
SCAPER-219ENST00000568382 TMF1P82094 1093 aa17.25■□□□□ 0.35
SCAPER-219ENST00000568382 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
SCAPER-219ENST00000568382 TTC21BQ7Z4L5 1316 aa17.24■□□□□ 0.35
SCAPER-219ENST00000568382 NLRP6P59044 892 aa17.24■□□□□ 0.35
SCAPER-219ENST00000568382 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
SCAPER-219ENST00000568382 MON2Q7Z3U7 1717 aa17.24■□□□□ 0.35
SCAPER-219ENST00000568382 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
SCAPER-219ENST00000568382 USP19O94966 1318 aa17.23■□□□□ 0.35
SCAPER-219ENST00000568382 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
SCAPER-219ENST00000568382 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
SCAPER-219ENST00000568382 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
SCAPER-219ENST00000568382 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
SCAPER-219ENST00000568382 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
SCAPER-219ENST00000568382 GCP02774 474 aa17.22■□□□□ 0.35
SCAPER-219ENST00000568382 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
SCAPER-219ENST00000568382 KIAA0232Q92628 1395 aa17.22■□□□□ 0.35
SCAPER-219ENST00000568382 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
SCAPER-219ENST00000568382 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
SCAPER-219ENST00000568382 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
SCAPER-219ENST00000568382 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
SCAPER-219ENST00000568382 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
SCAPER-219ENST00000568382 VPS72Q15906 364 aa17.2■□□□□ 0.34
SCAPER-219ENST00000568382 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
SCAPER-219ENST00000568382 RGS12O14924 1447 aa17.2■□□□□ 0.34
SCAPER-219ENST00000568382 NRAPQ86VF7 1730 aa17.19■□□□□ 0.34
SCAPER-219ENST00000568382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCAPER-219ENST00000568382 A0A1W2PP64 1363 aa17.18■□□□□ 0.34
SCAPER-219ENST00000568382 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
SCAPER-219ENST00000568382 HSPA5P11021 654 aaKnown RBP17.18■□□□□ 0.34
SCAPER-219ENST00000568382 KCNA4P22459 653 aa17.18■□□□□ 0.34
SCAPER-219ENST00000568382 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCAPER-219ENST00000568382 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
SCAPER-219ENST00000568382 GLI3P10071 1580 aa17.18■□□□□ 0.34
SCAPER-219ENST00000568382 CPDO75976 1380 aa17.17■□□□□ 0.34
SCAPER-219ENST00000568382 SLIT3O75094 1523 aa17.17■□□□□ 0.34
SCAPER-219ENST00000568382 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
SCAPER-219ENST00000568382 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
SCAPER-219ENST00000568382 NME9Q86XW9 330 aa17.17■□□□□ 0.34
SCAPER-219ENST00000568382 CCDC9Q9Y3X0 531 aaKnown RBP17.17■□□□□ 0.34
SCAPER-219ENST00000568382 EDC4Q6P2E9 1401 aaKnown RBP17.15■□□□□ 0.34
SCAPER-219ENST00000568382 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
SCAPER-219ENST00000568382 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
SCAPER-219ENST00000568382 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
SCAPER-219ENST00000568382 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
SCAPER-219ENST00000568382 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SCAPER-219ENST00000568382 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
SCAPER-219ENST00000568382 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
SCAPER-219ENST00000568382 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
SCAPER-219ENST00000568382 SOX12O15370 315 aa17.12■□□□□ 0.33
SCAPER-219ENST00000568382 EVA1CP58658 441 aa17.12■□□□□ 0.33
SCAPER-219ENST00000568382 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
SCAPER-219ENST00000568382 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
SCAPER-219ENST00000568382 MYOM1P52179 1685 aa17.11■□□□□ 0.33
SCAPER-219ENST00000568382 USP54Q70EL1 1684 aa17.11■□□□□ 0.33
SCAPER-219ENST00000568382 COL18A1P39060 1754 aa17.11■□□□□ 0.33
SCAPER-219ENST00000568382 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms