RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.56■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 TTC24A2A3L6 582 aaPredicted RBP15.55■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 F12P00748 615 aaPredicted RBP15.55■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 SNIP1Q8TAD8 396 aaKnown RBP15.55■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 SH3BP2P78314 561 aa15.54■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 BAP1Q92560 729 aa15.54■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 MAP10Q9P2G4 905 aa15.54■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 IL27Q8NEV9 243 aa15.53■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 MYT1Q01538 1121 aa15.52■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 LINC01559Q495D7 138 aa15.52■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 EHBP1Q8NDI1 1231 aa15.51■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 PPP2R2DQ66LE6 453 aa15.5■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 ZNF511Q8NB15 262 aa15.49■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 SMPD1P17405 629 aa15.46■□□□□ 0.07
DNAAF4-CCPG1-202ENST00000568310 J3QL48 77 aa15.45■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 SIAH2O43255 324 aa15.44■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 AVPP01185 164 aa15.44■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 PCMTD1Q96MG8 357 aaPredicted RBP15.44■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 ALDH1A1P00352 501 aa15.41■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 ARMC2Q8NEN0 867 aa15.41■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 AAASQ9NRG9 546 aa15.41■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 VARSP26640 1264 aaKnown RBP15.4■□□□□ 0.06
DNAAF4-CCPG1-202ENST00000568310 ST8SIA5O15466 376 aa15.39■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 AP1G2O75843 785 aa15.39■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 CRIPAKQ8N1N5 446 aa15.39■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 LRRN4Q8WUT4 740 aa15.39■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 FOXJ1Q92949 421 aa15.38■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 RFC5P40937 340 aa15.37■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 AXIN1O15169 862 aa15.35■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 AGERQ15109 404 aa15.35■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 SMCPP49901 116 aaPredicted RBP15.34■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 BPHLQ86WA6 291 aaPredicted RBP15.34■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 HPS1Q92902 700 aa15.34■□□□□ 0.05
DNAAF4-CCPG1-202ENST00000568310 FAM174AQ8TBP5 190 aa15.33■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 TLL2Q9Y6L7 1015 aa15.33■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 WASF2Q9Y6W5 498 aa15.33■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 ZNF787Q6DD87 383 aa15.32■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 MPNDQ8N594 471 aa15.32■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 C4orf48Q5BLP8 95 aa15.31■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 NR6A1Q15406 480 aa15.3■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.046e-6■□□□□ 11.1
DNAAF4-CCPG1-202ENST00000568310 TMEM259Q4ZIN3 620 aa15.29■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 FKBPLQ9UIM3 349 aa15.28■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 SH3BP5LQ7L8J4 393 aa15.27■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 SH3RF1Q7Z6J0 888 aa15.27■□□□□ 0.04
DNAAF4-CCPG1-202ENST00000568310 CDK15Q96Q40 435 aa15.25■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 POTECB2RU33 542 aa15.24■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 PDXDC2PQ6P474 469 aa15.24■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 HMX1Q9NP08 348 aaPredicted RBP15.24■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 EPS8L1Q8TE68 723 aa15.23■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 ZC3H4Q9UPT8 1303 aaKnown RBP15.22■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 C1QTNF2Q9BXJ5 285 aa15.22■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 ADH1CP00326 375 aa15.21■□□□□ 0.03
DNAAF4-CCPG1-202ENST00000568310 NNTQ13423 1086 aa15.2■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 ARHGAP9Q9BRR9 750 aa15.19■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 ATP13A2Q9NQ11 1180 aa15.18■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 GMPR2Q9P2T1 348 aaKnown RBP15.17■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 CAPN5O15484 640 aaPredicted RBP15.16■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 GRM5P41594 1212 aa15.16■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 PTK2Q05397 1052 aa15.15■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 NR5A1Q13285 461 aa15.15■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 TRIM34Q9BYJ4 488 aa15.15■□□□□ 0.02
DNAAF4-CCPG1-202ENST00000568310 ZBTB33Q86T24 672 aa15.14■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 GPSM3Q9Y4H4 160 aa15.14■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 MAP4K5Q9Y4K4 846 aa15.14■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 VASH1Q7L8A9 365 aaPredicted RBP15.13■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 BANK1Q8NDB2 785 aa15.13■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 WDR4P57081 412 aaKnown RBP15.11■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 OCSTAMPQ9BR26 566 aa15.11■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 NR3C2P08235 984 aa15.1■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 TIMP2P16035 220 aa15.1■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 KLF16Q9BXK1 252 aaPredicted RBP15.1■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 FSHRP23945 695 aa15.09■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
DNAAF4-CCPG1-202ENST00000568310 ADAM32Q8TC27 787 aa15.08■□□□□ 0
DNAAF4-CCPG1-202ENST00000568310 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
DNAAF4-CCPG1-202ENST00000568310 BMP1P13497 986 aa15.06■□□□□ 0
DNAAF4-CCPG1-202ENST00000568310 CDV3Q9UKY7 258 aaKnown RBP15.06■□□□□ 0
DNAAF4-CCPG1-202ENST00000568310 ZIC2O95409 532 aaPredicted RBP15.05■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 TRIM46Q7Z4K8 759 aa15.05■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 ITPKCQ96DU7 683 aa15.05■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 TRIM47Q96LD4 638 aa15.05■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 SOCS7O14512 581 aa15.04■□□□□ -0
DNAAF4-CCPG1-202ENST00000568310 ZNF775Q96BV0 537 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms