RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 NPATQ14207 1427 aa11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 ASXL2Q76L83 1435 aa11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 CHMP5Q9NZZ3 219 aa11.24□□□□□ -0.61
HDGFL3-206ENST00000568294 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 NME9Q86XW9 330 aa11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 MYOM1P52179 1685 aa11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 LAMC1P11047 1609 aa11.23□□□□□ -0.61
HDGFL3-206ENST00000568294 NGEFQ8N5V2 710 aa11.22□□□□□ -0.61
HDGFL3-206ENST00000568294 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
HDGFL3-206ENST00000568294 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
HDGFL3-206ENST00000568294 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
HDGFL3-206ENST00000568294 SMARCA5O60264 1052 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-206ENST00000568294 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
HDGFL3-206ENST00000568294 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.61
HDGFL3-206ENST00000568294 NINLQ9Y2I6 1382 aa11.21□□□□□ -0.61
HDGFL3-206ENST00000568294 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.62
HDGFL3-206ENST00000568294 ZNF518AQ6AHZ1 1483 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
HDGFL3-206ENST00000568294 CEP152O94986 1710 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 TSHZ3Q63HK5 1081 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 ARID3AQ99856 593 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 ZBTB40Q9NUA8 1239 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 KIF16BQ96L93 1317 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 SSFA2P28290 1259 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 ZNF428Q96B54 188 aa11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-206ENST00000568294 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
HDGFL3-206ENST00000568294 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
HDGFL3-206ENST00000568294 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
HDGFL3-206ENST00000568294 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
HDGFL3-206ENST00000568294 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 MCM10Q7L590 875 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 NLRP1Q9C000 1473 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 MROH2AA6NES4 1674 aa11.17□□□□□ -0.62
HDGFL3-206ENST00000568294 NUCB1Q02818 461 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 TET3O43151 1660 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 DTNBO60941 627 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
HDGFL3-206ENST00000568294 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
HDGFL3-206ENST00000568294 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
HDGFL3-206ENST00000568294 MYOM2P54296 1465 aa11.15□□□□□ -0.62
HDGFL3-206ENST00000568294 MCTP1Q6DN14 999 aa11.15□□□□□ -0.62
HDGFL3-206ENST00000568294 DDX49Q9Y6V7 483 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-206ENST00000568294 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 IQSEC2Q5JU85 1478 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 NUTM2GQ5VZR2 741 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 GAS2L3Q86XJ1 694 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 MPNDQ8N594 471 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 F6X3S4 739 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 VAMP4O75379 141 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 NFE2L2Q16236 605 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 GBP4Q96PP9 640 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
HDGFL3-206ENST00000568294 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 SIRT2Q8IXJ6 389 aa11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 LTV1Q96GA3 475 aaPredicted RBP11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 PKP1Q13835 747 aa11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
HDGFL3-206ENST00000568294 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 TULP4Q9NRJ4 1543 aa11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 ZBTB7BO15156 539 aaPredicted RBP11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 COG3Q96JB2 828 aa11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 KIF1BO60333 1816 aa11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
HDGFL3-206ENST00000568294 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 FCHSD2O94868 740 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 GNAI1P63096 354 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 ABCC11Q96J66 1382 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 AAMPQ13685 434 aa11.11□□□□□ -0.63
HDGFL3-206ENST00000568294 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms