RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 GJD4Q96KN9 370 aaPredicted RBP25.84■■□□□ 1.73
COMMD4-218ENST00000567377 CABP2Q9NPB3 220 aa25.84■■□□□ 1.73
COMMD4-218ENST00000567377 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.83■■□□□ 1.73
COMMD4-218ENST00000567377 RGS12O14924 1447 aa25.83■■□□□ 1.73
COMMD4-218ENST00000567377 PPIP5K1Q6PFW1 1433 aa25.82■■□□□ 1.72
COMMD4-218ENST00000567377 CARD11Q9BXL7 1154 aa25.82■■□□□ 1.72
COMMD4-218ENST00000567377 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
COMMD4-218ENST00000567377 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
COMMD4-218ENST00000567377 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
COMMD4-218ENST00000567377 VPS72Q15906 364 aa25.79■■□□□ 1.72
COMMD4-218ENST00000567377 ABCA3Q99758 1704 aa25.79■■□□□ 1.72
COMMD4-218ENST00000567377 SBNO2Q9Y2G9 1366 aa25.79■■□□□ 1.72
COMMD4-218ENST00000567377 RALGAPBQ86X10 1494 aa25.78■■□□□ 1.72
COMMD4-218ENST00000567377 NWD2Q9ULI1 1742 aa25.77■■□□□ 1.72
COMMD4-218ENST00000567377 CABP1Q9NZU7 370 aa25.77■■□□□ 1.72
COMMD4-218ENST00000567377 ABTB2Q8N961 1025 aa25.76■■□□□ 1.71
COMMD4-218ENST00000567377 CLSPNQ9HAW4 1339 aa25.75■■□□□ 1.71
COMMD4-218ENST00000567377 ZNF692Q9BU19 519 aaPredicted RBP25.75■■□□□ 1.71
COMMD4-218ENST00000567377 ATAD2Q6PL18 1390 aa25.74■■□□□ 1.71
COMMD4-218ENST00000567377 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
COMMD4-218ENST00000567377 NLRP13Q86W25 1043 aa25.74■■□□□ 1.71
COMMD4-218ENST00000567377 PRDM11Q9NQV5 511 aa25.73■■□□□ 1.71
COMMD4-218ENST00000567377 TIMELESSQ9UNS1 1208 aa25.73■■□□□ 1.71
COMMD4-218ENST00000567377 BTG4Q9NY30 223 aa25.72■■□□□ 1.71
COMMD4-218ENST00000567377 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
COMMD4-218ENST00000567377 PLCH1Q4KWH8 1693 aa25.71■■□□□ 1.71
COMMD4-218ENST00000567377 ONECUT3O60422 494 aaPredicted RBP25.7■■□□□ 1.7
COMMD4-218ENST00000567377 CCDC9Q9Y3X0 531 aaKnown RBP25.7■■□□□ 1.7
COMMD4-218ENST00000567377 USP6P35125 1406 aa25.7■■□□□ 1.7
COMMD4-218ENST00000567377 CRYBG1Q9Y4K1 1723 aa25.69■■□□□ 1.7
COMMD4-218ENST00000567377 PUS7Q96PZ0 661 aaKnown RBP25.69■■□□□ 1.7
COMMD4-218ENST00000567377 USP19O94966 1318 aa25.68■■□□□ 1.7
COMMD4-218ENST00000567377 NUTM2GQ5VZR2 741 aa25.68■■□□□ 1.7
COMMD4-218ENST00000567377 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
COMMD4-218ENST00000567377 GLI3P10071 1580 aa25.66■■□□□ 1.7
COMMD4-218ENST00000567377 CCDC125Q86Z20 511 aa25.65■■□□□ 1.7
COMMD4-218ENST00000567377 ZC3H6P61129 1189 aaKnown RBP25.64■■□□□ 1.7
COMMD4-218ENST00000567377 CPDO75976 1380 aa25.64■■□□□ 1.69
COMMD4-218ENST00000567377 SSH2Q76I76 1423 aa25.63■■□□□ 1.69
COMMD4-218ENST00000567377 GCP02774 474 aa25.63■■□□□ 1.69
COMMD4-218ENST00000567377 NLRP6P59044 892 aa25.63■■□□□ 1.69
COMMD4-218ENST00000567377 SEPT12Q8IYM1 358 aa25.63■■□□□ 1.69
COMMD4-218ENST00000567377 PHRF1Q9P1Y6 1649 aaKnown RBP25.63■■□□□ 1.69
COMMD4-218ENST00000567377 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
COMMD4-218ENST00000567377 TTC21AQ8NDW8 1320 aa25.62■■□□□ 1.69
COMMD4-218ENST00000567377 NRAPQ86VF7 1730 aa25.61■■□□□ 1.69
COMMD4-218ENST00000567377 CPSF1Q10570 1443 aaKnown RBP25.61■■□□□ 1.69
COMMD4-218ENST00000567377 SPATA31A5Q5VU36 1347 aa25.61■■□□□ 1.69
COMMD4-218ENST00000567377 SPATA31A7Q8IWB4 1347 aa25.61■■□□□ 1.69
COMMD4-218ENST00000567377 CHRNA2Q15822 529 aa25.59■■□□□ 1.69
COMMD4-218ENST00000567377 TTC21BQ7Z4L5 1316 aa25.59■■□□□ 1.69
COMMD4-218ENST00000567377 KTN1Q86UP2 1357 aaKnown RBP25.57■■□□□ 1.68
COMMD4-218ENST00000567377 ST20-MTHFSA0A0A6YYL1 179 aa25.57■■□□□ 1.68
COMMD4-218ENST00000567377 EVA1CP58658 441 aa25.57■■□□□ 1.68
COMMD4-218ENST00000567377 NRKQ7Z2Y5 1582 aa25.56■■□□□ 1.68
COMMD4-218ENST00000567377 HDGFL2Q7Z4V5 671 aaPredicted RBP25.56■■□□□ 1.68
COMMD4-218ENST00000567377 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
COMMD4-218ENST00000567377 FAM98CQ17RN3 349 aaKnown RBP25.55■■□□□ 1.68
COMMD4-218ENST00000567377 KRT27Q7Z3Y8 459 aa25.55■■□□□ 1.68
COMMD4-218ENST00000567377 TESK2Q96S53 571 aa25.55■■□□□ 1.68
COMMD4-218ENST00000567377 TERF2IPQ9NYB0 399 aa25.55■■□□□ 1.68
COMMD4-218ENST00000567377 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 EP400Q96L91 3159 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 A0A0G2JS52 829 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 MYT1Q01538 1121 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 TMC1Q8TDI8 760 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 SPATA31A1Q5TZJ5 1347 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 NINLQ9Y2I6 1382 aa25.54■■□□□ 1.68
COMMD4-218ENST00000567377 STRN4Q9NRL3 753 aa25.53■■□□□ 1.68
COMMD4-218ENST00000567377 SLIT3O75094 1523 aa25.53■■□□□ 1.68
COMMD4-218ENST00000567377 AATKQ6ZMQ8 1374 aa25.51■■□□□ 1.67
COMMD4-218ENST00000567377 PIK3C2AO00443 1686 aa25.49■■□□□ 1.67
COMMD4-218ENST00000567377 SLC12A5Q9H2X9 1139 aa25.49■■□□□ 1.67
COMMD4-218ENST00000567377 BRWD3Q6RI45 1802 aa25.49■■□□□ 1.67
COMMD4-218ENST00000567377 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
COMMD4-218ENST00000567377 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
COMMD4-218ENST00000567377 USP47Q96K76 1375 aa25.48■■□□□ 1.67
COMMD4-218ENST00000567377 TMF1P82094 1093 aa25.48■■□□□ 1.67
COMMD4-218ENST00000567377 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
COMMD4-218ENST00000567377 THRAP3Q9Y2W1 955 aaKnown RBP25.48■■□□□ 1.67
COMMD4-218ENST00000567377 CDCA8Q53HL2 280 aa25.47■■□□□ 1.67
COMMD4-218ENST00000567377 LMO7Q8WWI1 1683 aa25.47■■□□□ 1.67
COMMD4-218ENST00000567377 USP31Q70CQ4 1352 aa25.46■■□□□ 1.67
COMMD4-218ENST00000567377 SF3B2Q13435 895 aaKnown RBP25.46■■□□□ 1.67
COMMD4-218ENST00000567377 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
COMMD4-218ENST00000567377 CD163L1Q9NR16 1453 aa25.46■■□□□ 1.67
COMMD4-218ENST00000567377 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
COMMD4-218ENST00000567377 EDC4Q6P2E9 1401 aaKnown RBP25.46■■□□□ 1.67
COMMD4-218ENST00000567377 LARP1Q6PKG0 1096 aaKnown RBP25.45■■□□□ 1.66
COMMD4-218ENST00000567377 ARHGEF25Q86VW2 580 aa25.45■■□□□ 1.66
COMMD4-218ENST00000567377 TCP11L2Q8N4U5 519 aa25.45■■□□□ 1.66
COMMD4-218ENST00000567377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.44■■□□□ 1.66
COMMD4-218ENST00000567377 COL5A2P05997 1499 aaPredicted RBP25.42■■□□□ 1.66
COMMD4-218ENST00000567377 ZBTB7CA1YPR0 619 aa25.42■■□□□ 1.66
COMMD4-218ENST00000567377 THSD7AQ9UPZ6 1657 aa25.42■■□□□ 1.66
COMMD4-218ENST00000567377 USP35Q9P2H5 1018 aa25.41■■□□□ 1.66
COMMD4-218ENST00000567377 A0A1W2PP64 1363 aa25.41■■□□□ 1.66
COMMD4-218ENST00000567377 CRB1P82279 1406 aa25.4■■□□□ 1.66
COMMD4-218ENST00000567377 NME9Q86XW9 330 aa25.38■■□□□ 1.65
COMMD4-218ENST00000567377 ABCC6O95255 1503 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms