RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
CAPN3-216ENST00000567071 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
CAPN3-216ENST00000567071 C11orf95C9JLR9 678 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-216ENST00000567071 GPR162Q16538 588 aa14.92□□□□□ -0.02
CAPN3-216ENST00000567071 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CAPN3-216ENST00000567071 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
CAPN3-216ENST00000567071 PTGER2P43116 358 aa14.91□□□□□ -0.02
CAPN3-216ENST00000567071 BCL11BQ9C0K0 894 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-216ENST00000567071 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
CAPN3-216ENST00000567071 CLTCL1P53675 1640 aa14.9□□□□□ -0.02
CAPN3-216ENST00000567071 RGPD3A6NKT7 1758 aaPredicted RBP14.9□□□□□ -0.02
CAPN3-216ENST00000567071 RGPD4Q7Z3J3 1758 aa14.9□□□□□ -0.02
CAPN3-216ENST00000567071 WAPLQ7Z5K2 1190 aa14.89□□□□□ -0.03
CAPN3-216ENST00000567071 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
CAPN3-216ENST00000567071 HSPA6P17066 643 aa14.88□□□□□ -0.03
CAPN3-216ENST00000567071 STK26Q9P289 416 aa14.88□□□□□ -0.03
CAPN3-216ENST00000567071 RGPD8O14715 1765 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-216ENST00000567071 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
CAPN3-216ENST00000567071 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
CAPN3-216ENST00000567071 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
CAPN3-216ENST00000567071 PLSCR1O15162 318 aa14.86□□□□□ -0.03
CAPN3-216ENST00000567071 MTFR1LQ9H019 292 aa14.86□□□□□ -0.03
CAPN3-216ENST00000567071 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
CAPN3-216ENST00000567071 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
CAPN3-216ENST00000567071 TECPR2O15040 1411 aa14.85□□□□□ -0.03
CAPN3-216ENST00000567071 BARGINQ6ZT62 677 aa14.85□□□□□ -0.03
CAPN3-216ENST00000567071 STK32BQ9NY57 414 aa14.85□□□□□ -0.03
CAPN3-216ENST00000567071 SHANK3Q9BYB0 1731 aa14.84□□□□□ -0.03
CAPN3-216ENST00000567071 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
CAPN3-216ENST00000567071 ARXQ96QS3 562 aa14.84□□□□□ -0.03
CAPN3-216ENST00000567071 PDGFDQ9GZP0 370 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-216ENST00000567071 MAP3K5Q99683 1374 aa14.84□□□□□ -0.03
CAPN3-216ENST00000567071 CAPN15O75808 1086 aa14.83□□□□□ -0.04
CAPN3-216ENST00000567071 EVA1CP58658 441 aa14.83□□□□□ -0.04
CAPN3-216ENST00000567071 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-216ENST00000567071 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.04
CAPN3-216ENST00000567071 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.04
CAPN3-216ENST00000567071 PPLO60437 1756 aa14.81□□□□□ -0.04
CAPN3-216ENST00000567071 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
CAPN3-216ENST00000567071 ABCC11Q96J66 1382 aa14.81□□□□□ -0.04
CAPN3-216ENST00000567071 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
CAPN3-216ENST00000567071 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
CAPN3-216ENST00000567071 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
CAPN3-216ENST00000567071 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
CAPN3-216ENST00000567071 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
CAPN3-216ENST00000567071 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
CAPN3-216ENST00000567071 TCP11L2Q8N4U5 519 aa14.79□□□□□ -0.04
CAPN3-216ENST00000567071 GPBP1L1Q9HC44 474 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-216ENST00000567071 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-216ENST00000567071 KIAA0232Q92628 1395 aa14.78□□□□□ -0.04
CAPN3-216ENST00000567071 CHRNA2Q15822 529 aa14.78□□□□□ -0.04
CAPN3-216ENST00000567071 SLC15A2Q16348 729 aa14.77□□□□□ -0.05
CAPN3-216ENST00000567071 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
CAPN3-216ENST00000567071 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.05
CAPN3-216ENST00000567071 THRAP3Q9Y2W1 955 aaKnown RBP14.77□□□□□ -0.05
CAPN3-216ENST00000567071 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
CAPN3-216ENST00000567071 CRYBG1Q9Y4K1 1723 aa14.76□□□□□ -0.05
CAPN3-216ENST00000567071 GRIN3BO60391 1043 aa14.76□□□□□ -0.05
CAPN3-216ENST00000567071 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-216ENST00000567071 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
CAPN3-216ENST00000567071 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
CAPN3-216ENST00000567071 ATP10DQ9P241 1426 aa14.75□□□□□ -0.05
CAPN3-216ENST00000567071 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
CAPN3-216ENST00000567071 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
CAPN3-216ENST00000567071 PRELPP51888 382 aa14.74□□□□□ -0.05
CAPN3-216ENST00000567071 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
CAPN3-216ENST00000567071 SLC34A2O95436 690 aa14.73□□□□□ -0.05
CAPN3-216ENST00000567071 APLP1P51693 650 aa14.73□□□□□ -0.05
CAPN3-216ENST00000567071 TMEM132EQ6IEE7 984 aa14.73□□□□□ -0.05
CAPN3-216ENST00000567071 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
CAPN3-216ENST00000567071 ZC3H6P61129 1189 aaKnown RBP14.72□□□□□ -0.05
CAPN3-216ENST00000567071 TNS4Q8IZW8 715 aa14.72□□□□□ -0.05
CAPN3-216ENST00000567071 SIRT1Q96EB6 747 aa14.72□□□□□ -0.05
CAPN3-216ENST00000567071 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
CAPN3-216ENST00000567071 POLD1P28340 1107 aa14.71□□□□□ -0.05
CAPN3-216ENST00000567071 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
CAPN3-216ENST00000567071 LARP1Q6PKG0 1096 aaKnown RBP14.71□□□□□ -0.05
CAPN3-216ENST00000567071 PEAK1Q9H792 1746 aa14.71□□□□□ -0.05
CAPN3-216ENST00000567071 PROM2Q8N271 834 aa14.7□□□□□ -0.06
CAPN3-216ENST00000567071 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
CAPN3-216ENST00000567071 EIF3AQ14152 1382 aaKnown RBP14.7□□□□□ -0.06
CAPN3-216ENST00000567071 PHRF1Q9P1Y6 1649 aaKnown RBP14.7□□□□□ -0.06
CAPN3-216ENST00000567071 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
CAPN3-216ENST00000567071 SAFB2Q14151 953 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPN3-216ENST00000567071 DDB1Q16531 1140 aa14.68□□□□□ -0.06
CAPN3-216ENST00000567071 COL13A1Q5TAT6 717 aaPredicted RBP14.68□□□□□ -0.06
CAPN3-216ENST00000567071 ATP7BP35670 1465 aa14.68□□□□□ -0.06
CAPN3-216ENST00000567071 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
CAPN3-216ENST00000567071 ZNF526Q8TF50 670 aaPredicted RBP14.67□□□□□ -0.06
CAPN3-216ENST00000567071 ANKRD30BQ9BXX2 1392 aa14.66□□□□□ -0.06
CAPN3-216ENST00000567071 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
CAPN3-216ENST00000567071 POGKQ9P215 609 aa14.65□□□□□ -0.06
CAPN3-216ENST00000567071 PCDH10Q9P2E7 1040 aa14.65□□□□□ -0.06
CAPN3-216ENST00000567071 AATKQ6ZMQ8 1374 aa14.64□□□□□ -0.07
CAPN3-216ENST00000567071 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
CAPN3-216ENST00000567071 PRAM1Q96QH2 718 aa14.64□□□□□ -0.07
CAPN3-216ENST00000567071 AKAP12Q02952 1782 aa14.64□□□□□ -0.07
CAPN3-216ENST00000567071 ITGAEP38570 1179 aa14.63□□□□□ -0.07
CAPN3-216ENST00000567071 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
CAPN3-216ENST00000567071 SLC16A10Q8TF71 515 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms