RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 COL14A1Q05707 1796 aaKnown RBP39.95■■■■□ 3.99
UBFD1-206ENST00000566669 BLMP54132 1417 aaPredicted RBP39.95■■■■□ 3.99
UBFD1-206ENST00000566669 BTG4Q9NY30 223 aa39.95■■■■□ 3.99
UBFD1-206ENST00000566669 POLR3AO14802 1390 aaPredicted RBP39.95■■■■□ 3.99
UBFD1-206ENST00000566669 PLEKHG3A1L390 1219 aa39.92■■■■□ 3.98
UBFD1-206ENST00000566669 ZRANB1Q9UGI0 708 aa39.92■■■■□ 3.98
UBFD1-206ENST00000566669 NBPF1Q3BBV0 1214 aa39.9■■■■□ 3.98
UBFD1-206ENST00000566669 PRDM11Q9NQV5 511 aa39.89■■■■□ 3.98
UBFD1-206ENST00000566669 CENPJQ9HC77 1338 aaPredicted RBP39.89■■■■□ 3.98
UBFD1-206ENST00000566669 SF3B2Q13435 895 aaKnown RBP39.88■■■■□ 3.97
UBFD1-206ENST00000566669 KRT27Q7Z3Y8 459 aa39.88■■■■□ 3.97
UBFD1-206ENST00000566669 ACEP12821 1306 aa39.87■■■■□ 3.97
UBFD1-206ENST00000566669 NRAPQ86VF7 1730 aa39.86■■■■□ 3.97
UBFD1-206ENST00000566669 NBPF8Q3BBV2 869 aa39.86■■■■□ 3.97
UBFD1-206ENST00000566669 TOPAZ1Q8N9V7 1692 aa39.85■■■■□ 3.97
UBFD1-206ENST00000566669 CRYBG1Q9Y4K1 1723 aa39.84■■■■□ 3.97
UBFD1-206ENST00000566669 BRD4O60885 1362 aaPredicted RBP39.83■■■■□ 3.97
UBFD1-206ENST00000566669 A0A0G2JS52 829 aa39.82■■■■□ 3.97
UBFD1-206ENST00000566669 MYT1Q01538 1121 aa39.82■■■■□ 3.97
UBFD1-206ENST00000566669 SRPK2P78362 688 aaKnown RBP39.81■■■■□ 3.96
UBFD1-206ENST00000566669 BRWD3Q6RI45 1802 aa39.81■■■■□ 3.96
UBFD1-206ENST00000566669 L3MBTL2Q969R5 705 aa39.8■■■■□ 3.96
UBFD1-206ENST00000566669 SPATA31A5Q5VU36 1347 aa39.8■■■■□ 3.96
UBFD1-206ENST00000566669 SPATA31A7Q8IWB4 1347 aa39.8■■■■□ 3.96
UBFD1-206ENST00000566669 FAM98CQ17RN3 349 aaKnown RBP39.79■■■■□ 3.96
UBFD1-206ENST00000566669 KIAA0232Q92628 1395 aa39.77■■■■□ 3.96
UBFD1-206ENST00000566669 ABTB2Q8N961 1025 aa39.75■■■■□ 3.95
UBFD1-206ENST00000566669 PPIP5K1Q6PFW1 1433 aa39.74■■■■□ 3.95
UBFD1-206ENST00000566669 PHRF1Q9P1Y6 1649 aaKnown RBP39.72■■■■□ 3.95
UBFD1-206ENST00000566669 NLRP13Q86W25 1043 aa39.7■■■■□ 3.95
UBFD1-206ENST00000566669 CPDO75976 1380 aa39.68■■■■□ 3.94
UBFD1-206ENST00000566669 USP19O94966 1318 aa39.67■■■■□ 3.94
UBFD1-206ENST00000566669 EVC2Q86UK5 1308 aa39.67■■■■□ 3.94
UBFD1-206ENST00000566669 ZC3H6P61129 1189 aaKnown RBP39.67■■■■□ 3.94
UBFD1-206ENST00000566669 CABP2Q9NPB3 220 aa39.67■■■■□ 3.94
UBFD1-206ENST00000566669 QRICH2Q9H0J4 1663 aa39.67■■■■□ 3.94
UBFD1-206ENST00000566669 SPATA31A1Q5TZJ5 1347 aa39.66■■■■□ 3.94
UBFD1-206ENST00000566669 NUTM2GQ5VZR2 741 aa39.66■■■■□ 3.94
UBFD1-206ENST00000566669 BAG6P46379 1132 aa39.65■■■■□ 3.94
UBFD1-206ENST00000566669 SRCAPQ6ZRS2 3230 aa39.65■■■■□ 3.94
UBFD1-206ENST00000566669 CHRNA2Q15822 529 aa39.64■■■■□ 3.94
UBFD1-206ENST00000566669 ROCK2O75116 1388 aaKnown RBP39.63■■■■□ 3.93
UBFD1-206ENST00000566669 SIN3AQ96ST3 1273 aa39.63■■■■□ 3.93
UBFD1-206ENST00000566669 EVA1CP58658 441 aa39.62■■■■□ 3.93
UBFD1-206ENST00000566669 DEFB132Q7Z7B7 95 aa39.62■■■■□ 3.93
UBFD1-206ENST00000566669 THSD7AQ9UPZ6 1657 aa39.61■■■■□ 3.93
UBFD1-206ENST00000566669 STRN4Q9NRL3 753 aa39.61■■■■□ 3.93
UBFD1-206ENST00000566669 TRPM1Q7Z4N2 1603 aa39.61■■■■□ 3.93
UBFD1-206ENST00000566669 NRKQ7Z2Y5 1582 aa39.6■■■■□ 3.93
UBFD1-206ENST00000566669 NEUROD1Q13562 356 aa39.6■■■■□ 3.93
UBFD1-206ENST00000566669 CABP1Q9NZU7 370 aa39.59■■■■□ 3.93
UBFD1-206ENST00000566669 USP6P35125 1406 aa39.57■■■■□ 3.93
UBFD1-206ENST00000566669 GCP02774 474 aa39.57■■■■□ 3.93
UBFD1-206ENST00000566669 BARGINQ6ZT62 677 aa39.57■■■■□ 3.93
UBFD1-206ENST00000566669 SSH2Q76I76 1423 aa39.57■■■■□ 3.92
UBFD1-206ENST00000566669 ZNF692Q9BU19 519 aaPredicted RBP39.54■■■■□ 3.92
UBFD1-206ENST00000566669 THRAP3Q9Y2W1 955 aaKnown RBP39.52■■■■□ 3.92
UBFD1-206ENST00000566669 FAM196AQ6ZSG2 479 aa39.51■■■■□ 3.92
UBFD1-206ENST00000566669 NLRP6P59044 892 aa39.5■■■■□ 3.91
UBFD1-206ENST00000566669 RGPD1P0DJD0 1748 aa39.49■■■■□ 3.91
UBFD1-206ENST00000566669 CAMTA1Q9Y6Y1 1673 aa39.49■■■■□ 3.91
UBFD1-206ENST00000566669 LMO7Q8WWI1 1683 aa39.48■■■■□ 3.91
UBFD1-206ENST00000566669 TCP11L2Q8N4U5 519 aa39.48■■■■□ 3.91
UBFD1-206ENST00000566669 DISP2A7MBM2 1401 aa39.48■■■■□ 3.91
UBFD1-206ENST00000566669 USP35Q9P2H5 1018 aa39.45■■■■□ 3.91
UBFD1-206ENST00000566669 SBNO2Q9Y2G9 1366 aa39.45■■■■□ 3.91
UBFD1-206ENST00000566669 PDE3BQ13370 1112 aa39.44■■■■□ 3.9
UBFD1-206ENST00000566669 LARP1Q6PKG0 1096 aaKnown RBP39.44■■■■□ 3.9
UBFD1-206ENST00000566669 AATKQ6ZMQ8 1374 aa39.44■■■■□ 3.9
UBFD1-206ENST00000566669 C11orf95C9JLR9 678 aaPredicted RBP39.43■■■■□ 3.9
UBFD1-206ENST00000566669 SLIT3O75094 1523 aa39.42■■■■□ 3.9
UBFD1-206ENST00000566669 TTC21AQ8NDW8 1320 aa39.4■■■■□ 3.9
UBFD1-206ENST00000566669 FAM182BQ5T319 152 aa39.4■■■■□ 3.9
UBFD1-206ENST00000566669 COL5A2P05997 1499 aaPredicted RBP39.4■■■■□ 3.9
UBFD1-206ENST00000566669 KCNH5Q8NCM2 988 aa39.39■■■■□ 3.9
UBFD1-206ENST00000566669 CRB1P82279 1406 aa39.37■■■■□ 3.89
UBFD1-206ENST00000566669 PARD3Q8TEW0 1356 aa39.36■■■■□ 3.89
UBFD1-206ENST00000566669 EN1Q05925 392 aaPredicted RBP39.36■■■■□ 3.89
UBFD1-206ENST00000566669 TTC21BQ7Z4L5 1316 aa39.36■■■■□ 3.89
UBFD1-206ENST00000566669 CARD11Q9BXL7 1154 aa39.34■■■■□ 3.89
UBFD1-206ENST00000566669 TONSLQ96HA7 1378 aa39.33■■■■□ 3.89
UBFD1-206ENST00000566669 CPSF1Q10570 1443 aaKnown RBP39.33■■■■□ 3.89
UBFD1-206ENST00000566669 PIK3C2AO00443 1686 aa39.32■■■■□ 3.88
UBFD1-206ENST00000566669 TRIM37O94972 964 aa39.31■■■■□ 3.88
UBFD1-206ENST00000566669 TNS1Q9HBL0 1735 aaKnown RBP39.3■■■■□ 3.88
UBFD1-206ENST00000566669 KTN1Q86UP2 1357 aaKnown RBP39.29■■■■□ 3.88
UBFD1-206ENST00000566669 ZBTB7CA1YPR0 619 aa39.28■■■■□ 3.88
UBFD1-206ENST00000566669 AKAP12Q02952 1782 aa39.28■■■■□ 3.88
UBFD1-206ENST00000566669 ARHGEF25Q86VW2 580 aa39.26■■■■□ 3.88
UBFD1-206ENST00000566669 CDCA7Q9BWT1 371 aaPredicted RBP39.26■■■■□ 3.88
UBFD1-206ENST00000566669 APBA3O96018 575 aa39.25■■■■□ 3.87
UBFD1-206ENST00000566669 PARP4Q9UKK3 1724 aaKnown RBP39.25■■■■□ 3.87
UBFD1-206ENST00000566669 WDR17Q8IZU2 1322 aa39.24■■■■□ 3.87
UBFD1-206ENST00000566669 TOM1L2Q6ZVM7 507 aa39.24■■■■□ 3.87
UBFD1-206ENST00000566669 PUS7Q96PZ0 661 aaKnown RBP39.24■■■■□ 3.87
UBFD1-206ENST00000566669 CAMKK2Q96RR4 588 aa39.24■■■■□ 3.87
UBFD1-206ENST00000566669 LRP5O75197 1615 aa39.24■■■■□ 3.87
UBFD1-206ENST00000566669 SLC24A1O60721 1099 aa39.23■■■■□ 3.87
UBFD1-206ENST00000566669 EZH2Q15910 746 aaKnown RBP39.21■■■■□ 3.87
UBFD1-206ENST00000566669 ABCC6O95255 1503 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms