RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
KLHDC4-217ENST00000566661 MED14O60244 1454 aa22.54■■□□□ 1.2
KLHDC4-217ENST00000566661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.54■■□□□ 1.2
KLHDC4-217ENST00000566661 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
KLHDC4-217ENST00000566661 ROBO2Q9HCK4 1378 aa22.53■■□□□ 1.2
KLHDC4-217ENST00000566661 ATP7BP35670 1465 aa22.53■■□□□ 1.2
KLHDC4-217ENST00000566661 PDE3AQ14432 1141 aa22.53■■□□□ 1.2
KLHDC4-217ENST00000566661 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
KLHDC4-217ENST00000566661 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
KLHDC4-217ENST00000566661 RRP7AQ9Y3A4 280 aaKnown RBP22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 PPIP5K1Q6PFW1 1433 aa22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 KIF20BQ96Q89 1820 aa22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 EID1Q9Y6B2 187 aa22.51■■□□□ 1.19
KLHDC4-217ENST00000566661 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
KLHDC4-217ENST00000566661 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
KLHDC4-217ENST00000566661 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
KLHDC4-217ENST00000566661 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.196e-6■□□□□ 8.6
KLHDC4-217ENST00000566661 SKAP1Q86WV1 359 aa22.5■■□□□ 1.19
KLHDC4-217ENST00000566661 C8orf34Q49A92 452 aa22.49■■□□□ 1.19
KLHDC4-217ENST00000566661 IQSEC2Q5JU85 1478 aa22.48■■□□□ 1.19
KLHDC4-217ENST00000566661 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
KLHDC4-217ENST00000566661 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
KLHDC4-217ENST00000566661 NEFMP07197 916 aa22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 AAMPQ13685 434 aa22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 SLIT1O75093 1534 aa22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 PTPRUQ92729 1446 aa22.47■■□□□ 1.19
KLHDC4-217ENST00000566661 BCAR3O75815 825 aa22.46■■□□□ 1.19
KLHDC4-217ENST00000566661 FBLN1P23142 703 aa22.46■■□□□ 1.19
KLHDC4-217ENST00000566661 CCDC61Q9Y6R9 512 aa22.46■■□□□ 1.19
KLHDC4-217ENST00000566661 PRR36Q9H6K5 1346 aa22.45■■□□□ 1.18
KLHDC4-217ENST00000566661 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
KLHDC4-217ENST00000566661 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
KLHDC4-217ENST00000566661 U2SURPO15042 1029 aaKnown RBP22.45■■□□□ 1.18
KLHDC4-217ENST00000566661 THEMISQ8N1K5 641 aaPredicted RBP22.45■■□□□ 1.18
KLHDC4-217ENST00000566661 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
KLHDC4-217ENST00000566661 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
KLHDC4-217ENST00000566661 VIRMAQ69YN4 1812 aaKnown RBP22.43■■□□□ 1.18
KLHDC4-217ENST00000566661 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
KLHDC4-217ENST00000566661 NME9Q86XW9 330 aa22.42■■□□□ 1.18
KLHDC4-217ENST00000566661 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
KLHDC4-217ENST00000566661 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
KLHDC4-217ENST00000566661 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
KLHDC4-217ENST00000566661 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
KLHDC4-217ENST00000566661 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
KLHDC4-217ENST00000566661 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
KLHDC4-217ENST00000566661 NUTM2FA1L443 756 aa22.4■■□□□ 1.18
KLHDC4-217ENST00000566661 POLKQ9UBT6 870 aa22.4■■□□□ 1.18
KLHDC4-217ENST00000566661 TBX22Q9Y458 520 aa22.4■■□□□ 1.18
KLHDC4-217ENST00000566661 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
KLHDC4-217ENST00000566661 CLUAP1Q96AJ1 413 aa22.39■■□□□ 1.18
KLHDC4-217ENST00000566661 DIAPH1O60610 1272 aaKnown RBP22.39■■□□□ 1.17
KLHDC4-217ENST00000566661 PLEKHF1Q96S99 279 aa22.39■■□□□ 1.17
KLHDC4-217ENST00000566661 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
KLHDC4-217ENST00000566661 MON2Q7Z3U7 1717 aa22.38■■□□□ 1.17
KLHDC4-217ENST00000566661 AKAP12Q02952 1782 aa22.37■■□□□ 1.17
KLHDC4-217ENST00000566661 RGS3P49796 1198 aa22.37■■□□□ 1.17
KLHDC4-217ENST00000566661 RIMS1Q86UR5 1692 aaKnown RBP22.36■■□□□ 1.17
KLHDC4-217ENST00000566661 MAP2P11137 1827 aaKnown RBP22.36■■□□□ 1.17
KLHDC4-217ENST00000566661 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
KLHDC4-217ENST00000566661 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
KLHDC4-217ENST00000566661 IGHDP01880 384 aa22.34■■□□□ 1.17
KLHDC4-217ENST00000566661 ZNF692Q9BU19 519 aaPredicted RBP22.34■■□□□ 1.17
KLHDC4-217ENST00000566661 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
KLHDC4-217ENST00000566661 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
KLHDC4-217ENST00000566661 CEP170BQ9Y4F5 1589 aaPredicted RBP22.33■■□□□ 1.17
KLHDC4-217ENST00000566661 PMFBP1Q8TBY8 1022 aa22.33■■□□□ 1.16
KLHDC4-217ENST00000566661 ACEP12821 1306 aa22.32■■□□□ 1.16
KLHDC4-217ENST00000566661 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
KLHDC4-217ENST00000566661 COG3Q96JB2 828 aa22.32■■□□□ 1.16
KLHDC4-217ENST00000566661 TOPAZ1Q8N9V7 1692 aa22.32■■□□□ 1.16
KLHDC4-217ENST00000566661 DIP2AQ14689 1571 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 COG6Q9Y2V7 657 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 PTCH1Q13635 1447 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 PANK1Q8TE04 598 aa22.3■■□□□ 1.16
KLHDC4-217ENST00000566661 NFKBIBQ15653 356 aa22.29■■□□□ 1.16
KLHDC4-217ENST00000566661 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
KLHDC4-217ENST00000566661 RRS1Q15050 365 aaKnown RBP22.29■■□□□ 1.16
KLHDC4-217ENST00000566661 TRIM35Q9UPQ4 493 aa22.29■■□□□ 1.16
KLHDC4-217ENST00000566661 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
KLHDC4-217ENST00000566661 TTC21BQ7Z4L5 1316 aa22.28■■□□□ 1.16
KLHDC4-217ENST00000566661 FCHSD2O94868 740 aa22.26■■□□□ 1.15
KLHDC4-217ENST00000566661 KCNA6P17658 529 aa22.26■■□□□ 1.15
KLHDC4-217ENST00000566661 XRN1Q8IZH2 1706 aaKnown RBP22.26■■□□□ 1.15
KLHDC4-217ENST00000566661 NRKQ7Z2Y5 1582 aa22.26■■□□□ 1.15
KLHDC4-217ENST00000566661 RSPH6AQ9H0K4 717 aa22.26■■□□□ 1.15
KLHDC4-217ENST00000566661 LRRC7Q96NW7 1537 aa22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 RIPK4P57078 832 aa22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 FRAT1Q92837 279 aaPredicted RBP22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 USP6P35125 1406 aa22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 IL13P35225 146 aa22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
KLHDC4-217ENST00000566661 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
KLHDC4-217ENST00000566661 HMOX1P09601 288 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms