RNA–Protein interactions for RNA: ENST00000566659.1

PDPK1-215, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 3

Gene PDPK1, Length 451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-215ENST00000566659 POLR3AO14802 1390 aaPredicted RBP29.31■■■□□ 2.28
PDPK1-215ENST00000566659 NRAPQ86VF7 1730 aa29.31■■■□□ 2.28
PDPK1-215ENST00000566659 ATAD2Q6PL18 1390 aa29.3■■■□□ 2.28
PDPK1-215ENST00000566659 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
PDPK1-215ENST00000566659 CCDC61Q9Y6R9 512 aa29.3■■■□□ 2.28
PDPK1-215ENST00000566659 COL14A1Q05707 1796 aaKnown RBP29.29■■■□□ 2.28
PDPK1-215ENST00000566659 FAM83GA6ND36 823 aa29.28■■■□□ 2.28
PDPK1-215ENST00000566659 BRWD3Q6RI45 1802 aa29.28■■■□□ 2.28
PDPK1-215ENST00000566659 ACEP12821 1306 aa29.27■■■□□ 2.28
PDPK1-215ENST00000566659 PLEKHG3A1L390 1219 aa29.27■■■□□ 2.28
PDPK1-215ENST00000566659 PHRF1Q9P1Y6 1649 aaKnown RBP29.27■■■□□ 2.28
PDPK1-215ENST00000566659 VPS72Q15906 364 aa29.26■■■□□ 2.27
PDPK1-215ENST00000566659 SRPK2P78362 688 aaKnown RBP29.24■■■□□ 2.27
PDPK1-215ENST00000566659 NBPF8Q3BBV2 869 aa29.24■■■□□ 2.27
PDPK1-215ENST00000566659 ROCK2O75116 1388 aaKnown RBP29.24■■■□□ 2.27
PDPK1-215ENST00000566659 PPIP5K1Q6PFW1 1433 aa29.23■■■□□ 2.27
PDPK1-215ENST00000566659 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
PDPK1-215ENST00000566659 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
PDPK1-215ENST00000566659 BTG4Q9NY30 223 aa29.18■■■□□ 2.26
PDPK1-215ENST00000566659 CCDC9Q9Y3X0 531 aaKnown RBP29.18■■■□□ 2.26
PDPK1-215ENST00000566659 NUTM2GQ5VZR2 741 aa29.15■■■□□ 2.26
PDPK1-215ENST00000566659 EVC2Q86UK5 1308 aa29.15■■■□□ 2.26
PDPK1-215ENST00000566659 PRDM11Q9NQV5 511 aa29.14■■■□□ 2.26
PDPK1-215ENST00000566659 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
PDPK1-215ENST00000566659 NRKQ7Z2Y5 1582 aa29.13■■■□□ 2.25
PDPK1-215ENST00000566659 ONECUT3O60422 494 aaPredicted RBP29.13■■■□□ 2.25
PDPK1-215ENST00000566659 SEPT12Q8IYM1 358 aa29.13■■■□□ 2.25
PDPK1-215ENST00000566659 TONSLQ96HA7 1378 aa29.12■■■□□ 2.25
PDPK1-215ENST00000566659 ABTB2Q8N961 1025 aa29.11■■■□□ 2.25
PDPK1-215ENST00000566659 CABP1Q9NZU7 370 aa29.11■■■□□ 2.25
PDPK1-215ENST00000566659 BRD4O60885 1362 aaPredicted RBP29.11■■■□□ 2.25
PDPK1-215ENST00000566659 AKAP12Q02952 1782 aa29.09■■■□□ 2.25
PDPK1-215ENST00000566659 USP19O94966 1318 aa29.09■■■□□ 2.25
PDPK1-215ENST00000566659 USP6P35125 1406 aa29.09■■■□□ 2.25
PDPK1-215ENST00000566659 ZC3H6P61129 1189 aaKnown RBP29.07■■■□□ 2.24
PDPK1-215ENST00000566659 CHRNA2Q15822 529 aa29.07■■■□□ 2.24
PDPK1-215ENST00000566659 SPATA31A5Q5VU36 1347 aa29.06■■■□□ 2.24
PDPK1-215ENST00000566659 SPATA31A7Q8IWB4 1347 aa29.06■■■□□ 2.24
PDPK1-215ENST00000566659 CCDC125Q86Z20 511 aa29.06■■■□□ 2.24
PDPK1-215ENST00000566659 FAM98CQ17RN3 349 aaKnown RBP29.05■■■□□ 2.24
PDPK1-215ENST00000566659 SBNO2Q9Y2G9 1366 aa29.04■■■□□ 2.24
PDPK1-215ENST00000566659 NLRP13Q86W25 1043 aa29.04■■■□□ 2.24
PDPK1-215ENST00000566659 CARD11Q9BXL7 1154 aa29.04■■■□□ 2.24
PDPK1-215ENST00000566659 PIK3C2AO00443 1686 aa29.03■■■□□ 2.24
PDPK1-215ENST00000566659 LMO7Q8WWI1 1683 aa29.03■■■□□ 2.24
PDPK1-215ENST00000566659 THSD7AQ9UPZ6 1657 aa29.03■■■□□ 2.24
PDPK1-215ENST00000566659 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
PDPK1-215ENST00000566659 CPDO75976 1380 aa29.02■■■□□ 2.24
PDPK1-215ENST00000566659 A0A0G2JS52 829 aa29.02■■■□□ 2.24
PDPK1-215ENST00000566659 MYT1Q01538 1121 aa29.02■■■□□ 2.24
PDPK1-215ENST00000566659 KRT27Q7Z3Y8 459 aa29.02■■■□□ 2.24
PDPK1-215ENST00000566659 BLMP54132 1417 aaPredicted RBP29.01■■■□□ 2.23
PDPK1-215ENST00000566659 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
PDPK1-215ENST00000566659 SLIT3O75094 1523 aa28.99■■■□□ 2.23
PDPK1-215ENST00000566659 SPATA31A1Q5TZJ5 1347 aa28.98■■■□□ 2.23
PDPK1-215ENST00000566659 GCP02774 474 aa28.98■■■□□ 2.23
PDPK1-215ENST00000566659 STRN4Q9NRL3 753 aa28.98■■■□□ 2.23
PDPK1-215ENST00000566659 SRCAPQ6ZRS2 3230 aa28.98■■■□□ 2.23
PDPK1-215ENST00000566659 MON2Q7Z3U7 1717 aa28.97■■■□□ 2.23
PDPK1-215ENST00000566659 NLRP6P59044 892 aa28.95■■■□□ 2.22
PDPK1-215ENST00000566659 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.22
PDPK1-215ENST00000566659 CPSF1Q10570 1443 aaKnown RBP28.94■■■□□ 2.22
PDPK1-215ENST00000566659 TTC21BQ7Z4L5 1316 aa28.93■■■□□ 2.22
PDPK1-215ENST00000566659 EVA1CP58658 441 aa28.92■■■□□ 2.22
PDPK1-215ENST00000566659 COL18A1P39060 1754 aa28.9■■■□□ 2.22
PDPK1-215ENST00000566659 KTN1Q86UP2 1357 aaKnown RBP28.89■■■□□ 2.22
PDPK1-215ENST00000566659 COL5A2P05997 1499 aaPredicted RBP28.89■■■□□ 2.22
PDPK1-215ENST00000566659 TTC21AQ8NDW8 1320 aa28.89■■■□□ 2.21
PDPK1-215ENST00000566659 RGPD1P0DJD0 1748 aa28.89■■■□□ 2.21
PDPK1-215ENST00000566659 SF3B2Q13435 895 aaKnown RBP28.88■■■□□ 2.21
PDPK1-215ENST00000566659 LARP1Q6PKG0 1096 aaKnown RBP28.88■■■□□ 2.21
PDPK1-215ENST00000566659 DEFB132Q7Z7B7 95 aa28.86■■■□□ 2.21
PDPK1-215ENST00000566659 USP35Q9P2H5 1018 aa28.86■■■□□ 2.21
PDPK1-215ENST00000566659 AATKQ6ZMQ8 1374 aa28.86■■■□□ 2.21
PDPK1-215ENST00000566659 CD163L1Q9NR16 1453 aa28.85■■■□□ 2.21
PDPK1-215ENST00000566659 ZBTB7CA1YPR0 619 aa28.85■■■□□ 2.21
PDPK1-215ENST00000566659 BARGINQ6ZT62 677 aa28.85■■■□□ 2.21
PDPK1-215ENST00000566659 RGPD5Q99666 1765 aa28.85■■■□□ 2.21
PDPK1-215ENST00000566659 USP54Q70EL1 1684 aa28.84■■■□□ 2.21
PDPK1-215ENST00000566659 FAM182BQ5T319 152 aa28.84■■■□□ 2.21
PDPK1-215ENST00000566659 ZRANB1Q9UGI0 708 aa28.84■■■□□ 2.21
PDPK1-215ENST00000566659 TCP11L2Q8N4U5 519 aa28.82■■■□□ 2.2
PDPK1-215ENST00000566659 TNS1Q9HBL0 1735 aaKnown RBP28.82■■■□□ 2.2
PDPK1-215ENST00000566659 PARP4Q9UKK3 1724 aaKnown RBP28.81■■■□□ 2.2
PDPK1-215ENST00000566659 NFAT5O94916 1531 aa28.81■■■□□ 2.2
PDPK1-215ENST00000566659 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
PDPK1-215ENST00000566659 TMC1Q8TDI8 760 aa28.8■■■□□ 2.2
PDPK1-215ENST00000566659 PUS7Q96PZ0 661 aaKnown RBP28.8■■■□□ 2.2
PDPK1-215ENST00000566659 TESK2Q96S53 571 aa28.8■■■□□ 2.2
PDPK1-215ENST00000566659 CRB1P82279 1406 aa28.79■■■□□ 2.2
PDPK1-215ENST00000566659 THRAP3Q9Y2W1 955 aaKnown RBP28.79■■■□□ 2.2
PDPK1-215ENST00000566659 ST20-MTHFSA0A0A6YYL1 179 aa28.78■■■□□ 2.2
PDPK1-215ENST00000566659 ARHGEF25Q86VW2 580 aa28.78■■■□□ 2.2
PDPK1-215ENST00000566659 SLC12A5Q9H2X9 1139 aa28.78■■■□□ 2.2
PDPK1-215ENST00000566659 WNK3Q9BYP7 1800 aa28.78■■■□□ 2.2
PDPK1-215ENST00000566659 USP31Q70CQ4 1352 aa28.76■■■□□ 2.2
PDPK1-215ENST00000566659 SOX12O15370 315 aa28.76■■■□□ 2.19
PDPK1-215ENST00000566659 BAG6P46379 1132 aa28.76■■■□□ 2.19
PDPK1-215ENST00000566659 HDGFL2Q7Z4V5 671 aaPredicted RBP28.76■■■□□ 2.19
PDPK1-215ENST00000566659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms