RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 BCORL1Q5H9F3 1711 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 BLMP54132 1417 aaPredicted RBP7.1□□□□□ -1.27
GDPD3-205ENST00000566613 ARHGAP31Q2M1Z3 1444 aa7.1□□□□□ -1.27
GDPD3-205ENST00000566613 PLXNC1O60486 1568 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 ST18O60284 1047 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 MCM5P33992 734 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 IRX3P78415 501 aaPredicted RBP7.09□□□□□ -1.27
GDPD3-205ENST00000566613 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
GDPD3-205ENST00000566613 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 TSPYL1Q9H0U9 437 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 CCDC9Q9Y3X0 531 aaKnown RBP7.09□□□□□ -1.27
GDPD3-205ENST00000566613 UHRF1BP1LA0JNW5 1464 aa7.09□□□□□ -1.27
GDPD3-205ENST00000566613 AQRO60306 1485 aaKnown RBP eCLIP7.09□□□□□ -1.27
GDPD3-205ENST00000566613 YEATS2Q9ULM3 1422 aa7.09□□□□□ -1.28
GDPD3-205ENST00000566613 NCOA3Q9Y6Q9 1424 aa7.09□□□□□ -1.28
GDPD3-205ENST00000566613 EFCAB5A4FU69 1503 aa7.08□□□□□ -1.28
GDPD3-205ENST00000566613 EVI5O60447 810 aa7.08□□□□□ -1.28
GDPD3-205ENST00000566613 PRIM1P49642 420 aaKnown RBP7.08□□□□□ -1.28
GDPD3-205ENST00000566613 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
GDPD3-205ENST00000566613 ZNF830Q96NB3 372 aaPredicted RBP7.08□□□□□ -1.28
GDPD3-205ENST00000566613 FAM13BQ9NYF5 915 aa7.08□□□□□ -1.28
GDPD3-205ENST00000566613 SERPINA10Q9UK55 444 aa7.08□□□□□ -1.28
GDPD3-205ENST00000566613 MAPK8IP3Q9UPT6 1336 aa7.07□□□□□ -1.28
GDPD3-205ENST00000566613 RGS22Q8NE09 1264 aa7.07□□□□□ -1.28
GDPD3-205ENST00000566613 PTCD2Q8WV60 388 aaKnown RBP7.07□□□□□ -1.28
GDPD3-205ENST00000566613 UPF1Q92900 1129 aaKnown RBP eCLIP7.07□□□□□ -1.28
GDPD3-205ENST00000566613 DNAJC2Q99543 621 aaKnown RBP7.07□□□□□ -1.28
GDPD3-205ENST00000566613 EPAS1Q99814 870 aa7.07□□□□□ -1.28
GDPD3-205ENST00000566613 REPIN1Q9BWE0 567 aaKnown RBP7.07□□□□□ -1.28
GDPD3-205ENST00000566613 YY1AP1Q9H869 796 aa7.07□□□□□ -1.28
GDPD3-205ENST00000566613 FGD6Q6ZV73 1430 aa7.07□□□□□ -1.28
GDPD3-205ENST00000566613 MBD5Q9P267 1494 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
GDPD3-205ENST00000566613 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
GDPD3-205ENST00000566613 CDAN1Q8IWY9 1227 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 CHMP5Q9NZZ3 219 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 NAIPQ13075 1403 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 SUPT6HQ7KZ85 1726 aaKnown RBP7.06□□□□□ -1.28
GDPD3-205ENST00000566613 KIF15Q9NS87 1388 aa7.06□□□□□ -1.28
GDPD3-205ENST00000566613 RPRD2Q5VT52 1461 aaKnown RBP7.05□□□□□ -1.28
GDPD3-205ENST00000566613 USP19O94966 1318 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 KIF7Q2M1P5 1343 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 RAD21O60216 631 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 PHF14O94880 888 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 SLC34A2O95436 690 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 MMP14P50281 582 aa7.05□□□□□ -1.28
GDPD3-205ENST00000566613 AXDND1Q5T1B0 1012 aaPredicted RBP7.05□□□□□ -1.28
GDPD3-205ENST00000566613 NPDC1Q9NQX5 325 aaPredicted RBP7.05□□□□□ -1.28
GDPD3-205ENST00000566613 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 RBM25P49756 843 aaKnown RBP7.04□□□□□ -1.28
GDPD3-205ENST00000566613 NBPF1Q3BBV0 1214 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 DNTTIP2Q5QJE6 756 aaKnown RBP7.04□□□□□ -1.28
GDPD3-205ENST00000566613 CREBRFQ8IUR6 639 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 KCTD17Q8N5Z5 321 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 BANK1Q8NDB2 785 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 PRDM10Q9NQV6 1147 aa7.04□□□□□ -1.28
GDPD3-205ENST00000566613 EPRSP07814 1512 aaKnown RBP7.04□□□□□ -1.28
GDPD3-205ENST00000566613 POLA1P09884 1462 aaPredicted RBP7.04□□□□□ -1.28
GDPD3-205ENST00000566613 RTEL1-TNFRSF6BF6WH68 1400 aa7.03□□□□□ -1.28
GDPD3-205ENST00000566613 CLGNO14967 610 aa7.03□□□□□ -1.28
GDPD3-205ENST00000566613 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 SSTR3P32745 418 aaPredicted RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 FAM193AP78312 1265 aa7.03□□□□□ -1.28
GDPD3-205ENST00000566613 GABPB1Q06547 395 aaPredicted RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 SECISBP2LQ93073 1101 aaKnown RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 PRIMPOLQ96LW4 560 aa7.03□□□□□ -1.28
GDPD3-205ENST00000566613 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 NOL7Q9UMY1 257 aaKnown RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 R3HCC1Q9Y3T6 440 aaKnown RBP7.03□□□□□ -1.28
GDPD3-205ENST00000566613 GAPVD1Q14C86 1478 aa7.03□□□□□ -1.28
GDPD3-205ENST00000566613 EHBP1L1Q8N3D4 1523 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 SOCS7O14512 581 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 OATP04181 439 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 HSP90AB1P08238 724 aaKnown RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 HMGN5P82970 282 aaKnown RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 MDM2Q00987 491 aaPredicted RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 DIXDC1Q155Q3 683 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 MYRIPQ8NFW9 859 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 ZNF622Q969S3 477 aaKnown RBP eCLIP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 CCDC97Q96F63 343 aaPredicted RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
GDPD3-205ENST00000566613 UPF2Q9HAU5 1272 aaKnown RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 FAM217BQ9NTX9 383 aaPredicted RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 DENND4BO75064 1496 aaPredicted RBP7.02□□□□□ -1.29
GDPD3-205ENST00000566613 MYBBP1AQ9BQG0 1328 aaKnown RBP7.01□□□□□ -1.29
GDPD3-205ENST00000566613 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
GDPD3-205ENST00000566613 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
GDPD3-205ENST00000566613 TMEM92Q6UXU6 159 aa7.01□□□□□ -1.29
GDPD3-205ENST00000566613 CERKQ8TCT0 537 aa7.01□□□□□ -1.29
GDPD3-205ENST00000566613 PDLIM2Q96JY6 352 aa7.01□□□□□ -1.29
GDPD3-205ENST00000566613 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
GDPD3-205ENST00000566613 GBP4Q96PP9 640 aa7.01□□□□□ -1.29
GDPD3-205ENST00000566613 PHOX2BQ99453 314 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms