RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LRP6O75581 1613 aa36.43■■■■□ 3.42
NME3-209ENST00000566600 AKAP12Q02952 1782 aa36.43■■■■□ 3.42
NME3-209ENST00000566600 MEX3CQ5U5Q3 659 aaKnown RBP36.42■■■■□ 3.42
NME3-209ENST00000566600 HDGFL2Q7Z4V5 671 aaPredicted RBP36.42■■■■□ 3.42
NME3-209ENST00000566600 SLC12A5Q9H2X9 1139 aa36.42■■■■□ 3.42
NME3-209ENST00000566600 KTN1Q86UP2 1357 aaKnown RBP36.4■■■■□ 3.42
NME3-209ENST00000566600 PHF23Q9BUL5 403 aaPredicted RBP36.38■■■■□ 3.41
NME3-209ENST00000566600 ABTB2Q8N961 1025 aa36.36■■■■□ 3.41
NME3-209ENST00000566600 CD163L1Q9NR16 1453 aa36.36■■■■□ 3.41
NME3-209ENST00000566600 SSH2Q76I76 1423 aa36.35■■■■□ 3.41
NME3-209ENST00000566600 HAP1P54257 671 aaPredicted RBP36.35■■■■□ 3.41
NME3-209ENST00000566600 ZEB1P37275 1124 aaPredicted RBP36.34■■■■□ 3.41
NME3-209ENST00000566600 MON2Q7Z3U7 1717 aa36.34■■■■□ 3.41
NME3-209ENST00000566600 ADAMTS2O95450 1211 aa36.32■■■■□ 3.4
NME3-209ENST00000566600 TTC21BQ7Z4L5 1316 aa36.32■■■■□ 3.4
NME3-209ENST00000566600 TTC21AQ8NDW8 1320 aa36.32■■■■□ 3.4
NME3-209ENST00000566600 A0A1W2PP64 1363 aa36.31■■■■□ 3.4
NME3-209ENST00000566600 CABLES1Q8TDN4 633 aa36.3■■■■□ 3.4
NME3-209ENST00000566600 ANKRD36BQ8N2N9 1353 aa36.29■■■■□ 3.4
NME3-209ENST00000566600 NRKQ7Z2Y5 1582 aa36.28■■■■□ 3.4
NME3-209ENST00000566600 PLEKHG5O94827 1062 aa36.28■■■■□ 3.4
NME3-209ENST00000566600 NLRP13Q86W25 1043 aa36.28■■■■□ 3.4
NME3-209ENST00000566600 EDC4Q6P2E9 1401 aaKnown RBP36.27■■■■□ 3.4
NME3-209ENST00000566600 ABCA3Q99758 1704 aa36.27■■■■□ 3.4
NME3-209ENST00000566600 NUTM2GQ5VZR2 741 aa36.26■■■■□ 3.4
NME3-209ENST00000566600 POLR3GLQ9BT43 218 aa36.26■■■■□ 3.4
NME3-209ENST00000566600 C8orf37Q96NL8 207 aa36.25■■■■□ 3.39
NME3-209ENST00000566600 MARF1Q9Y4F3 1742 aaKnown RBP36.25■■■■□ 3.39
NME3-209ENST00000566600 MYOM1P52179 1685 aa36.24■■■■□ 3.39
NME3-209ENST00000566600 NGLY1Q96IV0 654 aa36.23■■■■□ 3.39
NME3-209ENST00000566600 CRYBG1Q9Y4K1 1723 aa36.22■■■■□ 3.39
NME3-209ENST00000566600 NLRP6P59044 892 aa36.22■■■■□ 3.39
NME3-209ENST00000566600 PIK3C2AO00443 1686 aa36.21■■■■□ 3.39
NME3-209ENST00000566600 USP19O94966 1318 aa36.21■■■■□ 3.39
NME3-209ENST00000566600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.21■■■■□ 3.39
NME3-209ENST00000566600 C11orf95C9JLR9 678 aaPredicted RBP36.19■■■■□ 3.38
NME3-209ENST00000566600 ZNF772Q68DY9 489 aaPredicted RBP36.18■■■■□ 3.38
NME3-209ENST00000566600 PHRF1Q9P1Y6 1649 aaKnown RBP36.18■■■■□ 3.38
NME3-209ENST00000566600 AFF2P51816 1311 aa36.17■■■■□ 3.38
NME3-209ENST00000566600 RGS17Q9UGC6 210 aaPredicted RBP36.16■■■■□ 3.38
NME3-209ENST00000566600 FNBP4Q8N3X1 1017 aaPredicted RBP36.14■■■■□ 3.38
NME3-209ENST00000566600 USP31Q70CQ4 1352 aa36.14■■■■□ 3.38
NME3-209ENST00000566600 KIF7Q2M1P5 1343 aa36.13■■■■□ 3.37
NME3-209ENST00000566600 NME9Q86XW9 330 aa36.12■■■■□ 3.37
NME3-209ENST00000566600 GCP02774 474 aa36.11■■■■□ 3.37
NME3-209ENST00000566600 SLIT3O75094 1523 aa36.11■■■■□ 3.37
NME3-209ENST00000566600 KCNH5Q8NCM2 988 aa36.09■■■■□ 3.37
NME3-209ENST00000566600 USP54Q70EL1 1684 aa36.09■■■■□ 3.37
NME3-209ENST00000566600 PRDM11Q9NQV5 511 aa36.08■■■■□ 3.37
NME3-209ENST00000566600 USP21Q9UK80 565 aa36.08■■■■□ 3.37
NME3-209ENST00000566600 FAM83GA6ND36 823 aa36.07■■■■□ 3.36
NME3-209ENST00000566600 KIAA0232Q92628 1395 aa36.06■■■■□ 3.36
NME3-209ENST00000566600 ZC3H6P61129 1189 aaKnown RBP36.06■■■■□ 3.36
NME3-209ENST00000566600 SLIT2O94813 1529 aa36.06■■■■□ 3.36
NME3-209ENST00000566600 COL14A1Q05707 1796 aaKnown RBP36.06■■■■□ 3.36
NME3-209ENST00000566600 CPDO75976 1380 aa36.05■■■■□ 3.36
NME3-209ENST00000566600 CARD14Q9BXL6 1004 aa36.05■■■■□ 3.36
NME3-209ENST00000566600 CCDC7Q96M83 1385 aa36.04■■■■□ 3.36
NME3-209ENST00000566600 NSD3Q9BZ95 1437 aa36.04■■■■□ 3.36
NME3-209ENST00000566600 ZRANB1Q9UGI0 708 aa36.03■■■■□ 3.36
NME3-209ENST00000566600 POTEAQ6S8J7 498 aa36.02■■■■□ 3.36
NME3-209ENST00000566600 COG3Q96JB2 828 aa36.02■■■■□ 3.36
NME3-209ENST00000566600 PANK3Q9H999 370 aa36.02■■■■□ 3.36
NME3-209ENST00000566600 NWD2Q9ULI1 1742 aa36.02■■■■□ 3.36
NME3-209ENST00000566600 PLCH1Q4KWH8 1693 aa36.01■■■■□ 3.36
NME3-209ENST00000566600 BCL9LQ86UU0 1499 aa36.01■■■■□ 3.36
NME3-209ENST00000566600 OVOS2A0A0J9YW53 1432 aa36■■■■□ 3.35
NME3-209ENST00000566600 OVOS2Q6IE36 1432 aa36■■■■□ 3.35
NME3-209ENST00000566600 UNC5CLQ8IV45 518 aa36■■■■□ 3.35
NME3-209ENST00000566600 WASHC2AQ641Q2 1341 aa36■■■■□ 3.35
NME3-209ENST00000566600 FYB1O15117 783 aa35.99■■■■□ 3.35
NME3-209ENST00000566600 QTRT2Q9H974 415 aaKnown RBP35.99■■■■□ 3.35
NME3-209ENST00000566600 TRPC5Q9UL62 973 aaPredicted RBP35.99■■■■□ 3.35
NME3-209ENST00000566600 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.98■■■■□ 3.35
NME3-209ENST00000566600 CGNL1Q0VF96 1302 aa35.98■■■■□ 3.35
NME3-209ENST00000566600 BTG4Q9NY30 223 aa35.97■■■■□ 3.35
NME3-209ENST00000566600 KIF20BQ96Q89 1820 aa35.97■■■■□ 3.35
NME3-209ENST00000566600 CHRNA2Q15822 529 aa35.96■■■■□ 3.35
NME3-209ENST00000566600 SOX12O15370 315 aa35.95■■■■□ 3.35
NME3-209ENST00000566600 NFAT5O94916 1531 aa35.94■■■■□ 3.34
NME3-209ENST00000566600 ATRNO75882 1429 aa35.93■■■■□ 3.34
NME3-209ENST00000566600 GGNBP2Q9H3C7 697 aa35.93■■■■□ 3.34
NME3-209ENST00000566600 ARHGEF25Q86VW2 580 aa35.92■■■■□ 3.34
NME3-209ENST00000566600 AATKQ6ZMQ8 1374 aa35.91■■■■□ 3.34
NME3-209ENST00000566600 ZBTB7CA1YPR0 619 aa35.91■■■■□ 3.34
NME3-209ENST00000566600 RXRBP28702 533 aa35.91■■■■□ 3.34
NME3-209ENST00000566600 RBM6P78332 1123 aaKnown RBP35.9■■■■□ 3.34
NME3-209ENST00000566600 KNSTRNQ9Y448 316 aa35.89■■■■□ 3.34
NME3-209ENST00000566600 NRAPQ86VF7 1730 aa35.88■■■■□ 3.34
NME3-209ENST00000566600 VPS72Q15906 364 aa35.88■■■■□ 3.33
NME3-209ENST00000566600 LMO7Q8WWI1 1683 aa35.88■■■■□ 3.33
NME3-209ENST00000566600 ABCC6O95255 1503 aa35.84■■■■□ 3.33
NME3-209ENST00000566600 GJD4Q96KN9 370 aaPredicted RBP35.84■■■■□ 3.33
NME3-209ENST00000566600 NSD2O96028 1365 aa35.84■■■■□ 3.33
NME3-209ENST00000566600 CAMTA1Q9Y6Y1 1673 aa35.84■■■■□ 3.33
NME3-209ENST00000566600 EVA1CP58658 441 aa35.83■■■■□ 3.33
NME3-209ENST00000566600 ILDR2Q71H61 639 aa35.83■■■■□ 3.33
NME3-209ENST00000566600 CCDC9Q9Y3X0 531 aaKnown RBP35.82■■■■□ 3.32
NME3-209ENST00000566600 COL18A1P39060 1754 aa35.81■■■■□ 3.32
NME3-209ENST00000566600 LTN1O94822 1766 aa35.8■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms