RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
KLHDC4-216ENST00000566561 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
KLHDC4-216ENST00000566561 CENPJQ9HC77 1338 aaPredicted RBP17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 VPS72Q15906 364 aa17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 DEFB132Q7Z7B7 95 aa17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 SEPT12Q8IYM1 358 aa17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
KLHDC4-216ENST00000566561 ATP7BP35670 1465 aa17.72■□□□□ 0.43
KLHDC4-216ENST00000566561 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
KLHDC4-216ENST00000566561 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
KLHDC4-216ENST00000566561 ROCK2O75116 1388 aaKnown RBP17.71■□□□□ 0.43
KLHDC4-216ENST00000566561 A0A0G2JS52 829 aa17.7■□□□□ 0.42
KLHDC4-216ENST00000566561 MYT1Q01538 1121 aa17.7■□□□□ 0.42
KLHDC4-216ENST00000566561 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
KLHDC4-216ENST00000566561 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
KLHDC4-216ENST00000566561 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
KLHDC4-216ENST00000566561 BAG6P46379 1132 aa17.68■□□□□ 0.42
KLHDC4-216ENST00000566561 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
KLHDC4-216ENST00000566561 ACEP12821 1306 aa17.68■□□□□ 0.42
KLHDC4-216ENST00000566561 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
KLHDC4-216ENST00000566561 TONSLQ96HA7 1378 aa17.67■□□□□ 0.42
KLHDC4-216ENST00000566561 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
KLHDC4-216ENST00000566561 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
KLHDC4-216ENST00000566561 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
KLHDC4-216ENST00000566561 TNS1Q9HBL0 1735 aaKnown RBP17.66■□□□□ 0.42
KLHDC4-216ENST00000566561 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
KLHDC4-216ENST00000566561 POLR3AO14802 1390 aaPredicted RBP17.65■□□□□ 0.42
KLHDC4-216ENST00000566561 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
KLHDC4-216ENST00000566561 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
KLHDC4-216ENST00000566561 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
KLHDC4-216ENST00000566561 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
KLHDC4-216ENST00000566561 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
KLHDC4-216ENST00000566561 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
KLHDC4-216ENST00000566561 THSD7AQ9UPZ6 1657 aa17.63■□□□□ 0.41
KLHDC4-216ENST00000566561 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
KLHDC4-216ENST00000566561 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
KLHDC4-216ENST00000566561 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
KLHDC4-216ENST00000566561 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
KLHDC4-216ENST00000566561 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
KLHDC4-216ENST00000566561 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
KLHDC4-216ENST00000566561 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
KLHDC4-216ENST00000566561 PRDM11Q9NQV5 511 aa17.6■□□□□ 0.41
KLHDC4-216ENST00000566561 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
KLHDC4-216ENST00000566561 DISP2A7MBM2 1401 aa17.59■□□□□ 0.41
KLHDC4-216ENST00000566561 ZC3H6P61129 1189 aaKnown RBP17.57■□□□□ 0.4
KLHDC4-216ENST00000566561 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
KLHDC4-216ENST00000566561 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
KLHDC4-216ENST00000566561 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
KLHDC4-216ENST00000566561 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
KLHDC4-216ENST00000566561 CHRNA2Q15822 529 aa17.55■□□□□ 0.4
KLHDC4-216ENST00000566561 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
KLHDC4-216ENST00000566561 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
KLHDC4-216ENST00000566561 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
KLHDC4-216ENST00000566561 USP6P35125 1406 aa17.54■□□□□ 0.4
KLHDC4-216ENST00000566561 RREB1Q92766 1687 aa17.53■□□□□ 0.4
KLHDC4-216ENST00000566561 NLRP6P59044 892 aa17.52■□□□□ 0.4
KLHDC4-216ENST00000566561 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
KLHDC4-216ENST00000566561 ZNF692Q9BU19 519 aaPredicted RBP17.52■□□□□ 0.4
KLHDC4-216ENST00000566561 STRN4Q9NRL3 753 aa17.52■□□□□ 0.4
KLHDC4-216ENST00000566561 USP19O94966 1318 aa17.51■□□□□ 0.39
KLHDC4-216ENST00000566561 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
KLHDC4-216ENST00000566561 NUP188Q5SRE5 1749 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 GCP02774 474 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 EVA1CP58658 441 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 PARD3Q8TEW0 1356 aa17.5■□□□□ 0.39
KLHDC4-216ENST00000566561 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
KLHDC4-216ENST00000566561 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-216ENST00000566561 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
KLHDC4-216ENST00000566561 SPATA31A1Q5TZJ5 1347 aa17.47■□□□□ 0.39
KLHDC4-216ENST00000566561 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
KLHDC4-216ENST00000566561 NRKQ7Z2Y5 1582 aa17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 CPDO75976 1380 aa17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 KTN1Q86UP2 1357 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 FAM196AQ6ZSG2 479 aa17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
KLHDC4-216ENST00000566561 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
KLHDC4-216ENST00000566561 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
KLHDC4-216ENST00000566561 TRIM37O94972 964 aa17.44■□□□□ 0.38
KLHDC4-216ENST00000566561 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
KLHDC4-216ENST00000566561 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
KLHDC4-216ENST00000566561 CAMKK2Q96RR4 588 aa17.43■□□□□ 0.38
KLHDC4-216ENST00000566561 PARP4Q9UKK3 1724 aaKnown RBP17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 SOX12O15370 315 aa17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 APBA3O96018 575 aa17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 SLC12A5Q9H2X9 1139 aa17.42■□□□□ 0.38
KLHDC4-216ENST00000566561 RGPD3A6NKT7 1758 aaPredicted RBP17.41■□□□□ 0.38
KLHDC4-216ENST00000566561 RGPD4Q7Z3J3 1758 aa17.41■□□□□ 0.38
KLHDC4-216ENST00000566561 KCNH5Q8NCM2 988 aa17.41■□□□□ 0.38
KLHDC4-216ENST00000566561 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
KLHDC4-216ENST00000566561 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
KLHDC4-216ENST00000566561 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
KLHDC4-216ENST00000566561 TESK2Q96S53 571 aa17.4■□□□□ 0.38
KLHDC4-216ENST00000566561 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms