RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 CARD11Q9BXL7 1154 aa27.04■■□□□ 1.92
CPNE7-208ENST00000566398 SLIT2O94813 1529 aa27.04■■□□□ 1.92
CPNE7-208ENST00000566398 MARF1Q9Y4F3 1742 aaKnown RBP27.03■■□□□ 1.92
CPNE7-208ENST00000566398 ALS2Q96Q42 1657 aa27.02■■□□□ 1.92
CPNE7-208ENST00000566398 UNC5CLQ8IV45 518 aa27.02■■□□□ 1.92
CPNE7-208ENST00000566398 ABCA3Q99758 1704 aa27■■□□□ 1.91
CPNE7-208ENST00000566398 GJD4Q96KN9 370 aaPredicted RBP26.97■■□□□ 1.91
CPNE7-208ENST00000566398 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
CPNE7-208ENST00000566398 SBNO2Q9Y2G9 1366 aa26.96■■□□□ 1.91
CPNE7-208ENST00000566398 FAM83GA6ND36 823 aa26.95■■□□□ 1.9
CPNE7-208ENST00000566398 PCGF6Q9BYE7 350 aa26.95■■□□□ 1.9
CPNE7-208ENST00000566398 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.94■■□□□ 1.9
CPNE7-208ENST00000566398 NUTM2GQ5VZR2 741 aa26.93■■□□□ 1.9
CPNE7-208ENST00000566398 ABTB2Q8N961 1025 aa26.92■■□□□ 1.9
CPNE7-208ENST00000566398 BRD4O60885 1362 aaPredicted RBP26.92■■□□□ 1.9
CPNE7-208ENST00000566398 ATAD2Q6PL18 1390 aa26.92■■□□□ 1.9
CPNE7-208ENST00000566398 VPS72Q15906 364 aa26.91■■□□□ 1.9
CPNE7-208ENST00000566398 USP6P35125 1406 aa26.9■■□□□ 1.9
CPNE7-208ENST00000566398 UPF1Q92900 1129 aaKnown RBP eCLIP26.9■■□□□ 1.9
CPNE7-208ENST00000566398 PRDM11Q9NQV5 511 aa26.9■■□□□ 1.9
CPNE7-208ENST00000566398 PLCH1Q4KWH8 1693 aa26.89■■□□□ 1.9
CPNE7-208ENST00000566398 CLSPNQ9HAW4 1339 aa26.89■■□□□ 1.89
CPNE7-208ENST00000566398 BTG4Q9NY30 223 aa26.88■■□□□ 1.89
CPNE7-208ENST00000566398 CCDC9Q9Y3X0 531 aaKnown RBP26.88■■□□□ 1.89
CPNE7-208ENST00000566398 NWD2Q9ULI1 1742 aa26.87■■□□□ 1.89
CPNE7-208ENST00000566398 CRYBG1Q9Y4K1 1723 aa26.87■■□□□ 1.89
CPNE7-208ENST00000566398 KIAA0232Q92628 1395 aa26.87■■□□□ 1.89
CPNE7-208ENST00000566398 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
CPNE7-208ENST00000566398 USP19O94966 1318 aa26.86■■□□□ 1.89
CPNE7-208ENST00000566398 GLI3P10071 1580 aa26.85■■□□□ 1.89
CPNE7-208ENST00000566398 NLRP13Q86W25 1043 aa26.85■■□□□ 1.89
CPNE7-208ENST00000566398 PHRF1Q9P1Y6 1649 aaKnown RBP26.83■■□□□ 1.89
CPNE7-208ENST00000566398 ZC3H6P61129 1189 aaKnown RBP26.82■■□□□ 1.88
CPNE7-208ENST00000566398 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
CPNE7-208ENST00000566398 SSH2Q76I76 1423 aa26.82■■□□□ 1.88
CPNE7-208ENST00000566398 TIMELESSQ9UNS1 1208 aa26.81■■□□□ 1.88
CPNE7-208ENST00000566398 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
CPNE7-208ENST00000566398 CHRNA2Q15822 529 aa26.8■■□□□ 1.88
CPNE7-208ENST00000566398 NRAPQ86VF7 1730 aa26.79■■□□□ 1.88
CPNE7-208ENST00000566398 ST20-MTHFSA0A0A6YYL1 179 aa26.78■■□□□ 1.88
CPNE7-208ENST00000566398 GCP02774 474 aa26.78■■□□□ 1.88
CPNE7-208ENST00000566398 NLRP6P59044 892 aa26.78■■□□□ 1.88
CPNE7-208ENST00000566398 CPDO75976 1380 aa26.78■■□□□ 1.88
CPNE7-208ENST00000566398 CPSF1Q10570 1443 aaKnown RBP26.78■■□□□ 1.88
CPNE7-208ENST00000566398 KTN1Q86UP2 1357 aaKnown RBP26.76■■□□□ 1.87
CPNE7-208ENST00000566398 TTC21BQ7Z4L5 1316 aa26.76■■□□□ 1.87
CPNE7-208ENST00000566398 SEPT12Q8IYM1 358 aa26.76■■□□□ 1.87
CPNE7-208ENST00000566398 TESK2Q96S53 571 aa26.76■■□□□ 1.87
CPNE7-208ENST00000566398 TTC21AQ8NDW8 1320 aa26.75■■□□□ 1.87
CPNE7-208ENST00000566398 TMC1Q8TDI8 760 aa26.75■■□□□ 1.87
CPNE7-208ENST00000566398 USP47Q96K76 1375 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 SPATA31A5Q5VU36 1347 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 SPATA31A7Q8IWB4 1347 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 A0A0G2JS52 829 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 ONECUT3O60422 494 aaPredicted RBP26.74■■□□□ 1.87
CPNE7-208ENST00000566398 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 MYT1Q01538 1121 aa26.74■■□□□ 1.87
CPNE7-208ENST00000566398 PUS7Q96PZ0 661 aaKnown RBP26.74■■□□□ 1.87
CPNE7-208ENST00000566398 FAM98CQ17RN3 349 aaKnown RBP26.73■■□□□ 1.87
CPNE7-208ENST00000566398 CCER1Q8TC90 406 aaPredicted RBP26.73■■□□□ 1.87
CPNE7-208ENST00000566398 STRN4Q9NRL3 753 aa26.73■■□□□ 1.87
CPNE7-208ENST00000566398 EP400Q96L91 3159 aa26.72■■□□□ 1.87
CPNE7-208ENST00000566398 SLIT3O75094 1523 aa26.72■■□□□ 1.87
CPNE7-208ENST00000566398 PIK3C2AO00443 1686 aa26.71■■□□□ 1.87
CPNE7-208ENST00000566398 HDGFL2Q7Z4V5 671 aaPredicted RBP26.71■■□□□ 1.87
CPNE7-208ENST00000566398 CD163L1Q9NR16 1453 aa26.69■■□□□ 1.86
CPNE7-208ENST00000566398 EVA1CP58658 441 aa26.69■■□□□ 1.86
CPNE7-208ENST00000566398 SLC12A5Q9H2X9 1139 aa26.69■■□□□ 1.86
CPNE7-208ENST00000566398 AKAP12Q02952 1782 aa26.69■■□□□ 1.86
CPNE7-208ENST00000566398 ZBTB7CA1YPR0 619 aa26.68■■□□□ 1.86
CPNE7-208ENST00000566398 TERF2IPQ9NYB0 399 aa26.68■■□□□ 1.86
CPNE7-208ENST00000566398 NINLQ9Y2I6 1382 aa26.68■■□□□ 1.86
CPNE7-208ENST00000566398 SPATA31A1Q5TZJ5 1347 aa26.67■■□□□ 1.86
CPNE7-208ENST00000566398 KRT27Q7Z3Y8 459 aa26.67■■□□□ 1.86
CPNE7-208ENST00000566398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.66■■□□□ 1.86
CPNE7-208ENST00000566398 KCNH5Q8NCM2 988 aa26.66■■□□□ 1.86
CPNE7-208ENST00000566398 CAMTA1Q9Y6Y1 1673 aa26.66■■□□□ 1.86
CPNE7-208ENST00000566398 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
CPNE7-208ENST00000566398 AATKQ6ZMQ8 1374 aa26.65■■□□□ 1.86
CPNE7-208ENST00000566398 LMO7Q8WWI1 1683 aa26.65■■□□□ 1.86
CPNE7-208ENST00000566398 TMF1P82094 1093 aa26.64■■□□□ 1.86
CPNE7-208ENST00000566398 CCDC125Q86Z20 511 aa26.64■■□□□ 1.86
CPNE7-208ENST00000566398 MON2Q7Z3U7 1717 aa26.64■■□□□ 1.85
CPNE7-208ENST00000566398 EDC4Q6P2E9 1401 aaKnown RBP26.64■■□□□ 1.85
CPNE7-208ENST00000566398 SOX12O15370 315 aa26.63■■□□□ 1.85
CPNE7-208ENST00000566398 LARP1Q6PKG0 1096 aaKnown RBP26.63■■□□□ 1.85
CPNE7-208ENST00000566398 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
CPNE7-208ENST00000566398 USP35Q9P2H5 1018 aa26.62■■□□□ 1.85
CPNE7-208ENST00000566398 USP31Q70CQ4 1352 aa26.61■■□□□ 1.85
CPNE7-208ENST00000566398 NME9Q86XW9 330 aa26.6■■□□□ 1.85
CPNE7-208ENST00000566398 BLMP54132 1417 aaPredicted RBP26.59■■□□□ 1.85
CPNE7-208ENST00000566398 THSD7AQ9UPZ6 1657 aa26.58■■□□□ 1.85
CPNE7-208ENST00000566398 ARHGEF25Q86VW2 580 aa26.58■■□□□ 1.85
CPNE7-208ENST00000566398 ZRANB1Q9UGI0 708 aa26.58■■□□□ 1.85
CPNE7-208ENST00000566398 CDCA8Q53HL2 280 aa26.57■■□□□ 1.84
CPNE7-208ENST00000566398 BARGINQ6ZT62 677 aa26.57■■□□□ 1.84
CPNE7-208ENST00000566398 TCP11L2Q8N4U5 519 aa26.57■■□□□ 1.84
CPNE7-208ENST00000566398 BRWD3Q6RI45 1802 aa26.57■■□□□ 1.84
CPNE7-208ENST00000566398 NFAT5O94916 1531 aa26.56■■□□□ 1.84
CPNE7-208ENST00000566398 ANKRD36BQ8N2N9 1353 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms