RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 ITSN1Q15811 1721 aa29.35■■■□□ 2.29
EDC3-209ENST00000566119 EVC2Q86UK5 1308 aa29.34■■■□□ 2.29
EDC3-209ENST00000566119 PPIP5K1Q6PFW1 1433 aa29.34■■■□□ 2.29
EDC3-209ENST00000566119 ALS2Q96Q42 1657 aa29.34■■■□□ 2.29
EDC3-209ENST00000566119 CARD11Q9BXL7 1154 aa29.33■■■□□ 2.29
EDC3-209ENST00000566119 CABP1Q9NZU7 370 aa29.33■■■□□ 2.29
EDC3-209ENST00000566119 QRICH2Q9H0J4 1663 aa29.32■■■□□ 2.28
EDC3-209ENST00000566119 NUTM2GQ5VZR2 741 aa29.31■■■□□ 2.28
EDC3-209ENST00000566119 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
EDC3-209ENST00000566119 VPS72Q15906 364 aa29.28■■■□□ 2.28
EDC3-209ENST00000566119 ABTB2Q8N961 1025 aa29.27■■■□□ 2.28
EDC3-209ENST00000566119 ABCA3Q99758 1704 aa29.27■■■□□ 2.28
EDC3-209ENST00000566119 RALGAPBQ86X10 1494 aa29.26■■■□□ 2.27
EDC3-209ENST00000566119 BTG4Q9NY30 223 aa29.26■■■□□ 2.27
EDC3-209ENST00000566119 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
EDC3-209ENST00000566119 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.23■■■□□ 2.27
EDC3-209ENST00000566119 PRDM11Q9NQV5 511 aa29.23■■■□□ 2.27
EDC3-209ENST00000566119 ZC3H6P61129 1189 aaKnown RBP29.21■■■□□ 2.27
EDC3-209ENST00000566119 PCGF6Q9BYE7 350 aa29.2■■■□□ 2.26
EDC3-209ENST00000566119 GLI3P10071 1580 aa29.2■■■□□ 2.26
EDC3-209ENST00000566119 ATAD2Q6PL18 1390 aa29.19■■■□□ 2.26
EDC3-209ENST00000566119 KIAA0232Q92628 1395 aa29.19■■■□□ 2.26
EDC3-209ENST00000566119 NLRP13Q86W25 1043 aa29.19■■■□□ 2.26
EDC3-209ENST00000566119 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
EDC3-209ENST00000566119 BRD4O60885 1362 aaPredicted RBP29.18■■■□□ 2.26
EDC3-209ENST00000566119 SBNO2Q9Y2G9 1366 aa29.18■■■□□ 2.26
EDC3-209ENST00000566119 ONECUT3O60422 494 aaPredicted RBP29.18■■■□□ 2.26
EDC3-209ENST00000566119 CHRNA2Q15822 529 aa29.18■■■□□ 2.26
EDC3-209ENST00000566119 USP6P35125 1406 aa29.17■■■□□ 2.26
EDC3-209ENST00000566119 NWD2Q9ULI1 1742 aa29.17■■■□□ 2.26
EDC3-209ENST00000566119 CRYBG1Q9Y4K1 1723 aa29.17■■■□□ 2.26
EDC3-209ENST00000566119 SEPT12Q8IYM1 358 aa29.16■■■□□ 2.26
EDC3-209ENST00000566119 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
EDC3-209ENST00000566119 USP19O94966 1318 aa29.15■■■□□ 2.26
EDC3-209ENST00000566119 COL14A1Q05707 1796 aaKnown RBP29.14■■■□□ 2.26
EDC3-209ENST00000566119 GCP02774 474 aa29.13■■■□□ 2.25
EDC3-209ENST00000566119 NLRP6P59044 892 aa29.13■■■□□ 2.25
EDC3-209ENST00000566119 SSH2Q76I76 1423 aa29.12■■■□□ 2.25
EDC3-209ENST00000566119 PHRF1Q9P1Y6 1649 aaKnown RBP29.09■■■□□ 2.25
EDC3-209ENST00000566119 ST20-MTHFSA0A0A6YYL1 179 aa29.09■■■□□ 2.25
EDC3-209ENST00000566119 FAM98CQ17RN3 349 aaKnown RBP29.09■■■□□ 2.25
EDC3-209ENST00000566119 SPATA31A5Q5VU36 1347 aa29.09■■■□□ 2.25
EDC3-209ENST00000566119 TTC21BQ7Z4L5 1316 aa29.09■■■□□ 2.25
EDC3-209ENST00000566119 SPATA31A7Q8IWB4 1347 aa29.09■■■□□ 2.25
EDC3-209ENST00000566119 STRN4Q9NRL3 753 aa29.08■■■□□ 2.25
EDC3-209ENST00000566119 NRAPQ86VF7 1730 aa29.08■■■□□ 2.25
EDC3-209ENST00000566119 CPDO75976 1380 aa29.07■■■□□ 2.24
EDC3-209ENST00000566119 CPSF1Q10570 1443 aaKnown RBP29.07■■■□□ 2.24
EDC3-209ENST00000566119 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
EDC3-209ENST00000566119 A0A0G2JS52 829 aa29.06■■■□□ 2.24
EDC3-209ENST00000566119 MYT1Q01538 1121 aa29.06■■■□□ 2.24
EDC3-209ENST00000566119 TESK2Q96S53 571 aa29.06■■■□□ 2.24
EDC3-209ENST00000566119 EVA1CP58658 441 aa29.05■■■□□ 2.24
EDC3-209ENST00000566119 TMC1Q8TDI8 760 aa29.05■■■□□ 2.24
EDC3-209ENST00000566119 TIMELESSQ9UNS1 1208 aa29.05■■■□□ 2.24
EDC3-209ENST00000566119 KTN1Q86UP2 1357 aaKnown RBP29.04■■■□□ 2.24
EDC3-209ENST00000566119 KRT27Q7Z3Y8 459 aa29.04■■■□□ 2.24
EDC3-209ENST00000566119 SLC12A5Q9H2X9 1139 aa29.04■■■□□ 2.24
EDC3-209ENST00000566119 NRKQ7Z2Y5 1582 aa29.04■■■□□ 2.24
EDC3-209ENST00000566119 CCDC125Q86Z20 511 aa29.03■■■□□ 2.24
EDC3-209ENST00000566119 PUS7Q96PZ0 661 aaKnown RBP29.03■■■□□ 2.24
EDC3-209ENST00000566119 EP400Q96L91 3159 aa29.03■■■□□ 2.24
EDC3-209ENST00000566119 SPATA31A1Q5TZJ5 1347 aa29.02■■■□□ 2.24
EDC3-209ENST00000566119 TTC21AQ8NDW8 1320 aa29.02■■■□□ 2.24
EDC3-209ENST00000566119 ZBTB7CA1YPR0 619 aa29■■■□□ 2.23
EDC3-209ENST00000566119 CAMTA1Q9Y6Y1 1673 aa28.99■■■□□ 2.23
EDC3-209ENST00000566119 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
EDC3-209ENST00000566119 LARP1Q6PKG0 1096 aaKnown RBP28.98■■■□□ 2.23
EDC3-209ENST00000566119 USP35Q9P2H5 1018 aa28.98■■■□□ 2.23
EDC3-209ENST00000566119 HDGFL2Q7Z4V5 671 aaPredicted RBP28.97■■■□□ 2.23
EDC3-209ENST00000566119 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.97■■■□□ 2.23
EDC3-209ENST00000566119 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
EDC3-209ENST00000566119 SLIT3O75094 1523 aa28.96■■■□□ 2.23
EDC3-209ENST00000566119 PIK3C2AO00443 1686 aa28.96■■■□□ 2.23
EDC3-209ENST00000566119 KCNH5Q8NCM2 988 aa28.95■■■□□ 2.22
EDC3-209ENST00000566119 TERF2IPQ9NYB0 399 aa28.95■■■□□ 2.22
EDC3-209ENST00000566119 AKAP12Q02952 1782 aa28.94■■■□□ 2.22
EDC3-209ENST00000566119 AATKQ6ZMQ8 1374 aa28.94■■■□□ 2.22
EDC3-209ENST00000566119 USP47Q96K76 1375 aa28.94■■■□□ 2.22
EDC3-209ENST00000566119 ZRANB1Q9UGI0 708 aa28.94■■■□□ 2.22
EDC3-209ENST00000566119 BRWD3Q6RI45 1802 aa28.94■■■□□ 2.22
EDC3-209ENST00000566119 SOX12O15370 315 aa28.93■■■□□ 2.22
EDC3-209ENST00000566119 CCER1Q8TC90 406 aaPredicted RBP28.93■■■□□ 2.22
EDC3-209ENST00000566119 ARHGEF25Q86VW2 580 aa28.92■■■□□ 2.22
EDC3-209ENST00000566119 LMO7Q8WWI1 1683 aa28.92■■■□□ 2.22
EDC3-209ENST00000566119 NME9Q86XW9 330 aa28.91■■■□□ 2.22
EDC3-209ENST00000566119 BLMP54132 1417 aaPredicted RBP28.91■■■□□ 2.22
EDC3-209ENST00000566119 FAM182BQ5T319 152 aa28.9■■■□□ 2.22
EDC3-209ENST00000566119 BARGINQ6ZT62 677 aa28.9■■■□□ 2.22
EDC3-209ENST00000566119 TCP11L2Q8N4U5 519 aa28.9■■■□□ 2.22
EDC3-209ENST00000566119 AXIN2Q9Y2T1 843 aa28.9■■■□□ 2.22
EDC3-209ENST00000566119 COL5A2P05997 1499 aaPredicted RBP28.89■■■□□ 2.22
EDC3-209ENST00000566119 A0A1W2PP64 1363 aa28.88■■■□□ 2.21
EDC3-209ENST00000566119 TMF1P82094 1093 aa28.88■■■□□ 2.21
EDC3-209ENST00000566119 USP31Q70CQ4 1352 aa28.88■■■□□ 2.21
EDC3-209ENST00000566119 SF3B2Q13435 895 aaKnown RBP28.86■■■□□ 2.21
EDC3-209ENST00000566119 THRAP3Q9Y2W1 955 aaKnown RBP28.86■■■□□ 2.21
EDC3-209ENST00000566119 EDC4Q6P2E9 1401 aaKnown RBP28.86■■■□□ 2.21
EDC3-209ENST00000566119 THSD7AQ9UPZ6 1657 aa28.85■■■□□ 2.21
EDC3-209ENST00000566119 MON2Q7Z3U7 1717 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms