RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 COL14A1Q05707 1796 aaKnown RBP28.57■■■□□ 2.16
TRADD-204ENST00000566104 PAK3O75914 559 aaPredicted RBP28.56■■■□□ 2.16
TRADD-204ENST00000566104 GJD4Q96KN9 370 aaPredicted RBP28.56■■■□□ 2.16
TRADD-204ENST00000566104 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
TRADD-204ENST00000566104 PHRF1Q9P1Y6 1649 aaKnown RBP28.54■■■□□ 2.16
TRADD-204ENST00000566104 GLI3P10071 1580 aa28.54■■■□□ 2.16
TRADD-204ENST00000566104 ATAD2Q6PL18 1390 aa28.53■■■□□ 2.16
TRADD-204ENST00000566104 NRAPQ86VF7 1730 aa28.53■■■□□ 2.16
TRADD-204ENST00000566104 RALGAPBQ86X10 1494 aa28.53■■■□□ 2.16
TRADD-204ENST00000566104 ACEP12821 1306 aa28.52■■■□□ 2.16
TRADD-204ENST00000566104 PLEKHG3A1L390 1219 aa28.52■■■□□ 2.16
TRADD-204ENST00000566104 PPIP5K1Q6PFW1 1433 aa28.52■■■□□ 2.16
TRADD-204ENST00000566104 TONSLQ96HA7 1378 aa28.51■■■□□ 2.16
TRADD-204ENST00000566104 EVC2Q86UK5 1308 aa28.47■■■□□ 2.15
TRADD-204ENST00000566104 VPS72Q15906 364 aa28.47■■■□□ 2.15
TRADD-204ENST00000566104 NBPF8Q3BBV2 869 aa28.47■■■□□ 2.15
TRADD-204ENST00000566104 CABP2Q9NPB3 220 aa28.46■■■□□ 2.15
TRADD-204ENST00000566104 FAM83GA6ND36 823 aa28.45■■■□□ 2.14
TRADD-204ENST00000566104 BRD4O60885 1362 aaPredicted RBP28.45■■■□□ 2.14
TRADD-204ENST00000566104 BRWD3Q6RI45 1802 aa28.44■■■□□ 2.14
TRADD-204ENST00000566104 CCDC9Q9Y3X0 531 aaKnown RBP28.43■■■□□ 2.14
TRADD-204ENST00000566104 NRKQ7Z2Y5 1582 aa28.41■■■□□ 2.14
TRADD-204ENST00000566104 PRDM11Q9NQV5 511 aa28.4■■■□□ 2.14
TRADD-204ENST00000566104 BTG4Q9NY30 223 aa28.4■■■□□ 2.14
TRADD-204ENST00000566104 SBNO2Q9Y2G9 1366 aa28.38■■■□□ 2.13
TRADD-204ENST00000566104 AKAP12Q02952 1782 aa28.38■■■□□ 2.13
TRADD-204ENST00000566104 ABTB2Q8N961 1025 aa28.38■■■□□ 2.13
TRADD-204ENST00000566104 USP6P35125 1406 aa28.37■■■□□ 2.13
TRADD-204ENST00000566104 CARD11Q9BXL7 1154 aa28.37■■■□□ 2.13
TRADD-204ENST00000566104 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
TRADD-204ENST00000566104 EP400Q96L91 3159 aa28.35■■■□□ 2.13
TRADD-204ENST00000566104 NUTM2GQ5VZR2 741 aa28.35■■■□□ 2.13
TRADD-204ENST00000566104 CABP1Q9NZU7 370 aa28.35■■■□□ 2.13
TRADD-204ENST00000566104 USP19O94966 1318 aa28.34■■■□□ 2.13
TRADD-204ENST00000566104 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
TRADD-204ENST00000566104 ONECUT3O60422 494 aaPredicted RBP28.32■■■□□ 2.12
TRADD-204ENST00000566104 SEPT12Q8IYM1 358 aa28.32■■■□□ 2.12
TRADD-204ENST00000566104 CCDC125Q86Z20 511 aa28.31■■■□□ 2.12
TRADD-204ENST00000566104 PIK3C2AO00443 1686 aa28.31■■■□□ 2.12
TRADD-204ENST00000566104 CPDO75976 1380 aa28.29■■■□□ 2.12
TRADD-204ENST00000566104 ZC3H6P61129 1189 aaKnown RBP28.29■■■□□ 2.12
TRADD-204ENST00000566104 LMO7Q8WWI1 1683 aa28.29■■■□□ 2.12
TRADD-204ENST00000566104 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
TRADD-204ENST00000566104 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
TRADD-204ENST00000566104 A0A0G2JS52 829 aa28.28■■■□□ 2.12
TRADD-204ENST00000566104 MYT1Q01538 1121 aa28.28■■■□□ 2.12
TRADD-204ENST00000566104 ZNF692Q9BU19 519 aaPredicted RBP28.28■■■□□ 2.12
TRADD-204ENST00000566104 MON2Q7Z3U7 1717 aa28.28■■■□□ 2.12
TRADD-204ENST00000566104 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
TRADD-204ENST00000566104 SLIT3O75094 1523 aa28.27■■■□□ 2.12
TRADD-204ENST00000566104 SSH2Q76I76 1423 aa28.26■■■□□ 2.12
TRADD-204ENST00000566104 THSD7AQ9UPZ6 1657 aa28.26■■■□□ 2.12
TRADD-204ENST00000566104 FAM98CQ17RN3 349 aaKnown RBP28.25■■■□□ 2.11
TRADD-204ENST00000566104 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
TRADD-204ENST00000566104 BLMP54132 1417 aaPredicted RBP28.24■■■□□ 2.11
TRADD-204ENST00000566104 GCP02774 474 aa28.23■■■□□ 2.11
TRADD-204ENST00000566104 NLRP6P59044 892 aa28.23■■■□□ 2.11
TRADD-204ENST00000566104 CPSF1Q10570 1443 aaKnown RBP28.22■■■□□ 2.11
TRADD-204ENST00000566104 STRN4Q9NRL3 753 aa28.22■■■□□ 2.11
TRADD-204ENST00000566104 CAMTA1Q9Y6Y1 1673 aa28.21■■■□□ 2.11
TRADD-204ENST00000566104 SPATA31A1Q5TZJ5 1347 aa28.2■■■□□ 2.11
TRADD-204ENST00000566104 TTC21AQ8NDW8 1320 aa28.2■■■□□ 2.11
TRADD-204ENST00000566104 KTN1Q86UP2 1357 aaKnown RBP28.2■■■□□ 2.1
TRADD-204ENST00000566104 EVA1CP58658 441 aa28.19■■■□□ 2.1
TRADD-204ENST00000566104 TTC21BQ7Z4L5 1316 aa28.18■■■□□ 2.1
TRADD-204ENST00000566104 SLC24A1O60721 1099 aa28.16■■■□□ 2.1
TRADD-204ENST00000566104 SF3B2Q13435 895 aaKnown RBP28.16■■■□□ 2.1
TRADD-204ENST00000566104 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
TRADD-204ENST00000566104 COL5A2P05997 1499 aaPredicted RBP28.15■■■□□ 2.1
TRADD-204ENST00000566104 RGPD1P0DJD0 1748 aa28.15■■■□□ 2.1
TRADD-204ENST00000566104 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
TRADD-204ENST00000566104 PUS7Q96PZ0 661 aaKnown RBP28.14■■■□□ 2.1
TRADD-204ENST00000566104 KCNH5Q8NCM2 988 aa28.13■■■□□ 2.09
TRADD-204ENST00000566104 AATKQ6ZMQ8 1374 aa28.12■■■□□ 2.09
TRADD-204ENST00000566104 COL18A1P39060 1754 aa28.12■■■□□ 2.09
TRADD-204ENST00000566104 CD163L1Q9NR16 1453 aa28.11■■■□□ 2.09
TRADD-204ENST00000566104 HDGFL2Q7Z4V5 671 aaPredicted RBP28.11■■■□□ 2.09
TRADD-204ENST00000566104 NINLQ9Y2I6 1382 aa28.11■■■□□ 2.09
TRADD-204ENST00000566104 BARGINQ6ZT62 677 aa28.1■■■□□ 2.09
TRADD-204ENST00000566104 TMC1Q8TDI8 760 aa28.1■■■□□ 2.09
TRADD-204ENST00000566104 USP35Q9P2H5 1018 aa28.1■■■□□ 2.09
TRADD-204ENST00000566104 ZBTB7CA1YPR0 619 aa28.09■■■□□ 2.09
TRADD-204ENST00000566104 LARP1Q6PKG0 1096 aaKnown RBP28.09■■■□□ 2.09
TRADD-204ENST00000566104 PARP4Q9UKK3 1724 aaKnown RBP28.09■■■□□ 2.09
TRADD-204ENST00000566104 CRB1P82279 1406 aa28.09■■■□□ 2.09
TRADD-204ENST00000566104 ABCC6O95255 1503 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 TCP11L2Q8N4U5 519 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 TERF2IPQ9NYB0 399 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 TIMELESSQ9UNS1 1208 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 THRAP3Q9Y2W1 955 aaKnown RBP28.08■■■□□ 2.09
TRADD-204ENST00000566104 RGPD5Q99666 1765 aa28.08■■■□□ 2.09
TRADD-204ENST00000566104 EDC4Q6P2E9 1401 aaKnown RBP28.08■■■□□ 2.09
TRADD-204ENST00000566104 NFAT5O94916 1531 aa28.08■■■□□ 2.08
TRADD-204ENST00000566104 TESK2Q96S53 571 aa28.07■■■□□ 2.08
TRADD-204ENST00000566104 WNK3Q9BYP7 1800 aa28.06■■■□□ 2.08
TRADD-204ENST00000566104 USP31Q70CQ4 1352 aa28.05■■■□□ 2.08
TRADD-204ENST00000566104 USP47Q96K76 1375 aa28.05■■■□□ 2.08
TRADD-204ENST00000566104 TNS1Q9HBL0 1735 aaKnown RBP28.05■■■□□ 2.08
TRADD-204ENST00000566104 ZRANB1Q9UGI0 708 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms