RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
CAPN3-215ENST00000565559 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
CAPN3-215ENST00000565559 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
CAPN3-215ENST00000565559 APBA3O96018 575 aa16.96■□□□□ 0.31
CAPN3-215ENST00000565559 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
CAPN3-215ENST00000565559 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
CAPN3-215ENST00000565559 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
CAPN3-215ENST00000565559 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 TRIM37O94972 964 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 STK26Q9P289 416 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 KIF1BO60333 1816 aa16.95■□□□□ 0.3
CAPN3-215ENST00000565559 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
CAPN3-215ENST00000565559 KCNQ2O43526 872 aa16.93■□□□□ 0.3
CAPN3-215ENST00000565559 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
CAPN3-215ENST00000565559 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
CAPN3-215ENST00000565559 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
CAPN3-215ENST00000565559 TECPR2O15040 1411 aa16.92■□□□□ 0.3
CAPN3-215ENST00000565559 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
CAPN3-215ENST00000565559 ITGAEP38570 1179 aa16.9■□□□□ 0.3
CAPN3-215ENST00000565559 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
CAPN3-215ENST00000565559 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
CAPN3-215ENST00000565559 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
CAPN3-215ENST00000565559 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
CAPN3-215ENST00000565559 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
CAPN3-215ENST00000565559 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
CAPN3-215ENST00000565559 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
CAPN3-215ENST00000565559 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
CAPN3-215ENST00000565559 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CAPN3-215ENST00000565559 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
CAPN3-215ENST00000565559 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
CAPN3-215ENST00000565559 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
CAPN3-215ENST00000565559 RREB1Q92766 1687 aa16.84■□□□□ 0.29
CAPN3-215ENST00000565559 PPLO60437 1756 aa16.83■□□□□ 0.28
CAPN3-215ENST00000565559 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
CAPN3-215ENST00000565559 PRDM11Q9NQV5 511 aa16.83■□□□□ 0.28
CAPN3-215ENST00000565559 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
CAPN3-215ENST00000565559 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
CAPN3-215ENST00000565559 FKBP8Q14318 412 aa16.82■□□□□ 0.28
CAPN3-215ENST00000565559 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
CAPN3-215ENST00000565559 ADGRF5Q8IZF2 1346 aa16.81■□□□□ 0.28
CAPN3-215ENST00000565559 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
CAPN3-215ENST00000565559 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
CAPN3-215ENST00000565559 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
CAPN3-215ENST00000565559 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
CAPN3-215ENST00000565559 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
CAPN3-215ENST00000565559 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
CAPN3-215ENST00000565559 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
CAPN3-215ENST00000565559 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
CAPN3-215ENST00000565559 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
CAPN3-215ENST00000565559 IFT172Q9UG01 1749 aa16.77■□□□□ 0.28
CAPN3-215ENST00000565559 ANKARQ7Z5J8 1434 aa16.77■□□□□ 0.27
CAPN3-215ENST00000565559 C11orf95C9JLR9 678 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-215ENST00000565559 BARGINQ6ZT62 677 aa16.76■□□□□ 0.27
CAPN3-215ENST00000565559 REM2Q8IYK8 340 aaPredicted RBP16.76■□□□□ 0.27
CAPN3-215ENST00000565559 NRKQ7Z2Y5 1582 aa16.75■□□□□ 0.27
CAPN3-215ENST00000565559 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-215ENST00000565559 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
CAPN3-215ENST00000565559 EVA1CP58658 441 aa16.74■□□□□ 0.27
CAPN3-215ENST00000565559 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
CAPN3-215ENST00000565559 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAPN3-215ENST00000565559 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
CAPN3-215ENST00000565559 KIAA0232Q92628 1395 aa16.73■□□□□ 0.27
CAPN3-215ENST00000565559 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
CAPN3-215ENST00000565559 ZBTB7AO95365 584 aa16.72■□□□□ 0.27
CAPN3-215ENST00000565559 CHRNA2Q15822 529 aa16.72■□□□□ 0.27
CAPN3-215ENST00000565559 PIK3C2GO75747 1445 aa16.71■□□□□ 0.27
CAPN3-215ENST00000565559 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
CAPN3-215ENST00000565559 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
CAPN3-215ENST00000565559 POGKQ9P215 609 aa16.71■□□□□ 0.27
CAPN3-215ENST00000565559 DHX57Q6P158 1386 aaKnown RBP16.71■□□□□ 0.27
CAPN3-215ENST00000565559 ALS2Q96Q42 1657 aa16.71■□□□□ 0.27
CAPN3-215ENST00000565559 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
CAPN3-215ENST00000565559 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
CAPN3-215ENST00000565559 SYT17Q9BSW7 474 aa16.7■□□□□ 0.26
CAPN3-215ENST00000565559 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-215ENST00000565559 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
CAPN3-215ENST00000565559 UTRNP46939 3433 aa16.7■□□□□ 0.26
CAPN3-215ENST00000565559 PLSCR1O15162 318 aa16.69■□□□□ 0.26
CAPN3-215ENST00000565559 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
CAPN3-215ENST00000565559 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
CAPN3-215ENST00000565559 PTGER2P43116 358 aa16.68■□□□□ 0.26
CAPN3-215ENST00000565559 SSH2Q76I76 1423 aa16.68■□□□□ 0.26
CAPN3-215ENST00000565559 MYOM1P52179 1685 aa16.67■□□□□ 0.26
CAPN3-215ENST00000565559 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
CAPN3-215ENST00000565559 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
CAPN3-215ENST00000565559 OVOS2A0A0G2JMS6 1433 aa16.66■□□□□ 0.26
CAPN3-215ENST00000565559 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
CAPN3-215ENST00000565559 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
CAPN3-215ENST00000565559 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
CAPN3-215ENST00000565559 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
CAPN3-215ENST00000565559 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
CAPN3-215ENST00000565559 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
CAPN3-215ENST00000565559 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
CAPN3-215ENST00000565559 CHD4Q14839 1912 aa16.64■□□□□ 0.26
CAPN3-215ENST00000565559 SPATA31E1Q6ZUB1 1445 aa16.64■□□□□ 0.25
CAPN3-215ENST00000565559 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
CAPN3-215ENST00000565559 DLC1Q96QB1 1528 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms