RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 POLR3AO14802 1390 aaPredicted RBP26.03■■□□□ 1.76
SYNGR3-204ENST00000564642 RBM6P78332 1123 aaKnown RBP26.01■■□□□ 1.75
SYNGR3-204ENST00000564642 TRPC5Q9UL62 973 aaPredicted RBP26.01■■□□□ 1.75
SYNGR3-204ENST00000564642 ABCA3Q99758 1704 aa26■■□□□ 1.75
SYNGR3-204ENST00000564642 CABP1Q9NZU7 370 aa25.99■■□□□ 1.75
SYNGR3-204ENST00000564642 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
SYNGR3-204ENST00000564642 BCL9LQ86UU0 1499 aa25.96■■□□□ 1.75
SYNGR3-204ENST00000564642 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
SYNGR3-204ENST00000564642 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
SYNGR3-204ENST00000564642 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.74
SYNGR3-204ENST00000564642 UNC5CLQ8IV45 518 aa25.94■■□□□ 1.74
SYNGR3-204ENST00000564642 ABTB2Q8N961 1025 aa25.93■■□□□ 1.74
SYNGR3-204ENST00000564642 ATRNO75882 1429 aa25.93■■□□□ 1.74
SYNGR3-204ENST00000564642 SLIT2O94813 1529 aa25.93■■□□□ 1.74
SYNGR3-204ENST00000564642 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
SYNGR3-204ENST00000564642 ATAD2Q6PL18 1390 aa25.92■■□□□ 1.74
SYNGR3-204ENST00000564642 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.91■■□□□ 1.74
SYNGR3-204ENST00000564642 FAM83GA6ND36 823 aa25.91■■□□□ 1.74
SYNGR3-204ENST00000564642 BRD4O60885 1362 aaPredicted RBP25.9■■□□□ 1.74
SYNGR3-204ENST00000564642 CRYBG1Q9Y4K1 1723 aa25.89■■□□□ 1.74
SYNGR3-204ENST00000564642 PLCH1Q4KWH8 1693 aa25.89■■□□□ 1.73
SYNGR3-204ENST00000564642 NWD2Q9ULI1 1742 aa25.88■■□□□ 1.73
SYNGR3-204ENST00000564642 GJD4Q96KN9 370 aaPredicted RBP25.88■■□□□ 1.73
SYNGR3-204ENST00000564642 ZNF692Q9BU19 519 aaPredicted RBP25.88■■□□□ 1.73
SYNGR3-204ENST00000564642 ST20-MTHFSA0A0A6YYL1 179 aa25.87■■□□□ 1.73
SYNGR3-204ENST00000564642 RGS12O14924 1447 aa25.87■■□□□ 1.73
SYNGR3-204ENST00000564642 USP6P35125 1406 aa25.87■■□□□ 1.73
SYNGR3-204ENST00000564642 NLRP13Q86W25 1043 aa25.86■■□□□ 1.73
SYNGR3-204ENST00000564642 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
SYNGR3-204ENST00000564642 PHRF1Q9P1Y6 1649 aaKnown RBP25.85■■□□□ 1.73
SYNGR3-204ENST00000564642 COL14A1Q05707 1796 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-204ENST00000564642 PRDM11Q9NQV5 511 aa25.84■■□□□ 1.73
SYNGR3-204ENST00000564642 BTG4Q9NY30 223 aa25.84■■□□□ 1.73
SYNGR3-204ENST00000564642 CCDC9Q9Y3X0 531 aaKnown RBP25.84■■□□□ 1.73
SYNGR3-204ENST00000564642 AKAP12Q02952 1782 aa25.83■■□□□ 1.73
SYNGR3-204ENST00000564642 ZC3H6P61129 1189 aaKnown RBP25.82■■□□□ 1.72
SYNGR3-204ENST00000564642 VPS72Q15906 364 aa25.82■■□□□ 1.72
SYNGR3-204ENST00000564642 TMC1Q8TDI8 760 aa25.82■■□□□ 1.72
SYNGR3-204ENST00000564642 NLRP6P59044 892 aa25.8■■□□□ 1.72
SYNGR3-204ENST00000564642 PUS7Q96PZ0 661 aaKnown RBP25.8■■□□□ 1.72
SYNGR3-204ENST00000564642 TESK2Q96S53 571 aa25.8■■□□□ 1.72
SYNGR3-204ENST00000564642 KIAA0232Q92628 1395 aa25.8■■□□□ 1.72
SYNGR3-204ENST00000564642 USP47Q96K76 1375 aa25.8■■□□□ 1.72
SYNGR3-204ENST00000564642 KTN1Q86UP2 1357 aaKnown RBP25.79■■□□□ 1.72
SYNGR3-204ENST00000564642 CHRNA2Q15822 529 aa25.78■■□□□ 1.72
SYNGR3-204ENST00000564642 USP19O94966 1318 aa25.78■■□□□ 1.72
SYNGR3-204ENST00000564642 CPSF1Q10570 1443 aaKnown RBP25.78■■□□□ 1.72
SYNGR3-204ENST00000564642 SSH2Q76I76 1423 aa25.78■■□□□ 1.72
SYNGR3-204ENST00000564642 GCP02774 474 aa25.77■■□□□ 1.72
SYNGR3-204ENST00000564642 TTC21BQ7Z4L5 1316 aa25.77■■□□□ 1.72
SYNGR3-204ENST00000564642 GLI3P10071 1580 aa25.77■■□□□ 1.72
SYNGR3-204ENST00000564642 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
SYNGR3-204ENST00000564642 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.71
SYNGR3-204ENST00000564642 SLC12A5Q9H2X9 1139 aa25.76■■□□□ 1.71
SYNGR3-204ENST00000564642 NRKQ7Z2Y5 1582 aa25.75■■□□□ 1.71
SYNGR3-204ENST00000564642 TTC21AQ8NDW8 1320 aa25.75■■□□□ 1.71
SYNGR3-204ENST00000564642 TMF1P82094 1093 aa25.74■■□□□ 1.71
SYNGR3-204ENST00000564642 PIK3C2AO00443 1686 aa25.74■■□□□ 1.71
SYNGR3-204ENST00000564642 TERF2IPQ9NYB0 399 aa25.73■■□□□ 1.71
SYNGR3-204ENST00000564642 MON2Q7Z3U7 1717 aa25.73■■□□□ 1.71
SYNGR3-204ENST00000564642 CPDO75976 1380 aa25.71■■□□□ 1.71
SYNGR3-204ENST00000564642 EVA1CP58658 441 aa25.71■■□□□ 1.71
SYNGR3-204ENST00000564642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.7■■□□□ 1.7
SYNGR3-204ENST00000564642 STRN4Q9NRL3 753 aa25.7■■□□□ 1.7
SYNGR3-204ENST00000564642 CD163L1Q9NR16 1453 aa25.69■■□□□ 1.7
SYNGR3-204ENST00000564642 ZBTB7CA1YPR0 619 aa25.69■■□□□ 1.7
SYNGR3-204ENST00000564642 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
SYNGR3-204ENST00000564642 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
SYNGR3-204ENST00000564642 A0A0G2JS52 829 aa25.68■■□□□ 1.7
SYNGR3-204ENST00000564642 ONECUT3O60422 494 aaPredicted RBP25.68■■□□□ 1.7
SYNGR3-204ENST00000564642 MYT1Q01538 1121 aa25.68■■□□□ 1.7
SYNGR3-204ENST00000564642 SLIT3O75094 1523 aa25.68■■□□□ 1.7
SYNGR3-204ENST00000564642 CDCA8Q53HL2 280 aa25.67■■□□□ 1.7
SYNGR3-204ENST00000564642 KCNH5Q8NCM2 988 aa25.67■■□□□ 1.7
SYNGR3-204ENST00000564642 SPATA31A5Q5VU36 1347 aa25.66■■□□□ 1.7
SYNGR3-204ENST00000564642 SPATA31A7Q8IWB4 1347 aa25.66■■□□□ 1.7
SYNGR3-204ENST00000564642 FAM98CQ17RN3 349 aaKnown RBP25.66■■□□□ 1.7
SYNGR3-204ENST00000564642 BRWD3Q6RI45 1802 aa25.65■■□□□ 1.7
SYNGR3-204ENST00000564642 A0A1W2PP64 1363 aa25.65■■□□□ 1.7
SYNGR3-204ENST00000564642 EDC4Q6P2E9 1401 aaKnown RBP25.64■■□□□ 1.7
SYNGR3-204ENST00000564642 SOX12O15370 315 aa25.64■■□□□ 1.7
SYNGR3-204ENST00000564642 CAMTA1Q9Y6Y1 1673 aa25.64■■□□□ 1.69
SYNGR3-204ENST00000564642 LMO7Q8WWI1 1683 aa25.63■■□□□ 1.69
SYNGR3-204ENST00000564642 NME9Q86XW9 330 aa25.62■■□□□ 1.69
SYNGR3-204ENST00000564642 SPATA31A1Q5TZJ5 1347 aa25.62■■□□□ 1.69
SYNGR3-204ENST00000564642 ZRANB1Q9UGI0 708 aa25.61■■□□□ 1.69
SYNGR3-204ENST00000564642 AATKQ6ZMQ8 1374 aa25.6■■□□□ 1.69
SYNGR3-204ENST00000564642 USP31Q70CQ4 1352 aa25.6■■□□□ 1.69
SYNGR3-204ENST00000564642 USP35Q9P2H5 1018 aa25.6■■□□□ 1.69
SYNGR3-204ENST00000564642 LARP1Q6PKG0 1096 aaKnown RBP25.59■■□□□ 1.69
SYNGR3-204ENST00000564642 KRT27Q7Z3Y8 459 aa25.59■■□□□ 1.69
SYNGR3-204ENST00000564642 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.69
SYNGR3-204ENST00000564642 ARHGEF25Q86VW2 580 aa25.58■■□□□ 1.69
SYNGR3-204ENST00000564642 ANKRD36BQ8N2N9 1353 aa25.57■■□□□ 1.68
SYNGR3-204ENST00000564642 USP54Q70EL1 1684 aa25.56■■□□□ 1.68
SYNGR3-204ENST00000564642 COL5A2P05997 1499 aaPredicted RBP25.56■■□□□ 1.68
SYNGR3-204ENST00000564642 COL18A1P39060 1754 aa25.55■■□□□ 1.68
SYNGR3-204ENST00000564642 CCDC125Q86Z20 511 aa25.55■■□□□ 1.68
SYNGR3-204ENST00000564642 NFAT5O94916 1531 aa25.53■■□□□ 1.68
SYNGR3-204ENST00000564642 TCP11L2Q8N4U5 519 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms