RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 DESI1Q6ICB0 168 aa6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 LYPD8Q6UX82 237 aa6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 NUTM2AQ8IVF1 878 aaPredicted RBP6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 CRIPAKQ8N1N5 446 aa6.38□□□□□ -1.39
SUB1P3-201ENST00000564581 BCANQ96GW7 911 aa6.37□□□□□ -1.39
SUB1P3-201ENST00000564581 LILRB3O75022 631 aa6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 SMCPP49901 116 aaPredicted RBP6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 CTC1Q2NKJ3 1217 aa6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 PRPF38BQ5VTL8 546 aaKnown RBP6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 FBXO31Q5XUX0 539 aaPredicted RBP6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 ZNF511Q8NB15 262 aa6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 TLL2Q9Y6L7 1015 aa6.36□□□□□ -1.39
SUB1P3-201ENST00000564581 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
SUB1P3-201ENST00000564581 FOXJ1Q92949 421 aa6.35□□□□□ -1.39
SUB1P3-201ENST00000564581 C11orf95C9JLR9 678 aaPredicted RBP6.34□□□□□ -1.39
SUB1P3-201ENST00000564581 CLK2P49760 499 aaKnown RBP6.34□□□□□ -1.39
SUB1P3-201ENST00000564581 FAM117AQ9C073 453 aa6.34□□□□□ -1.39
SUB1P3-201ENST00000564581 KDM4CQ9H3R0 1056 aa6.34□□□□□ -1.39
SUB1P3-201ENST00000564581 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
SUB1P3-201ENST00000564581 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
SUB1P3-201ENST00000564581 PROCA1Q8NCQ7 364 aaPredicted RBP6.33□□□□□ -1.4
SUB1P3-201ENST00000564581 WASF2Q9Y6W5 498 aa6.33□□□□□ -1.4
SUB1P3-201ENST00000564581 BMP1P13497 986 aa6.31□□□□□ -1.4
SUB1P3-201ENST00000564581 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
SUB1P3-201ENST00000564581 TUSC1Q2TAM9 212 aa6.31□□□□□ -1.4
SUB1P3-201ENST00000564581 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
SUB1P3-201ENST00000564581 PLEKHG3A1L390 1219 aa6.3□□□□□ -1.4
SUB1P3-201ENST00000564581 VARSP26640 1264 aaKnown RBP6.3□□□□□ -1.4
SUB1P3-201ENST00000564581 ARID5BQ14865 1188 aa6.3□□□□□ -1.4
SUB1P3-201ENST00000564581 RSPH6AQ9H0K4 717 aa6.3□□□□□ -1.4
SUB1P3-201ENST00000564581 ATP1B4Q9UN42 357 aaPredicted RBP6.3□□□□□ -1.4
SUB1P3-201ENST00000564581 CAPN5O15484 640 aaPredicted RBP6.29□□□□□ -1.4
SUB1P3-201ENST00000564581 NNTQ13423 1086 aa6.29□□□□□ -1.4
SUB1P3-201ENST00000564581 AGERQ15109 404 aa6.29□□□□□ -1.4
SUB1P3-201ENST00000564581 TRIM46Q7Z4K8 759 aa6.29□□□□□ -1.4
SUB1P3-201ENST00000564581 SKIV2LQ15477 1246 aaKnown RBP6.28□□□□□ -1.4
SUB1P3-201ENST00000564581 HELBQ8NG08 1087 aaPredicted RBP6.28□□□□□ -1.4
SUB1P3-201ENST00000564581 LRRN4Q8WUT4 740 aa6.28□□□□□ -1.4
SUB1P3-201ENST00000564581 TREML4Q6UXN2 200 aa6.27□□□□□ -1.41
SUB1P3-201ENST00000564581 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
SUB1P3-201ENST00000564581 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
SUB1P3-201ENST00000564581 SH3D19Q5HYK7 790 aa6.26□□□□□ -1.41
SUB1P3-201ENST00000564581 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
SUB1P3-201ENST00000564581 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.26□□□□□ -1.41
SUB1P3-201ENST00000564581 MAGEB6P1A0A0J9YX57 407 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 ADH1CP00326 375 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 NR3C2P08235 984 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 GRM5P41594 1212 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 WDR4P57081 412 aaKnown RBP6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 NR6A1Q15406 480 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 BPHLQ86WA6 291 aaPredicted RBP6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 MPNDQ8N594 471 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 DDRGK1Q96HY6 314 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 CDK15Q96Q40 435 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 SENP2Q9HC62 589 aa6.25□□□□□ -1.41
SUB1P3-201ENST00000564581 TIMP2P16035 220 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 NFX1Q12986 1120 aaKnown RBP6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 SH3RF1Q7Z6J0 888 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 EPS8L1Q8TE68 723 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 ZFP42Q96MM3 310 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 KLF16Q9BXK1 252 aaPredicted RBP6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 CARD14Q9BXL6 1004 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
SUB1P3-201ENST00000564581 AP1G2O75843 785 aa6.23□□□□□ -1.41
SUB1P3-201ENST00000564581 WFS1O76024 890 aa6.23□□□□□ -1.41
SUB1P3-201ENST00000564581 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
SUB1P3-201ENST00000564581 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
SUB1P3-201ENST00000564581 SOBPA7XYQ1 873 aa6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 ZIC2O95409 532 aaPredicted RBP6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 PPP2R2DQ66LE6 453 aa6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 ARMC2Q8NEN0 867 aa6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 IL27Q8NEV9 243 aa6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 KIFC2Q96AC6 838 aa6.22□□□□□ -1.41
SUB1P3-201ENST00000564581 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 VEGFBP49765 207 aa6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 NEUROD2Q15784 382 aa6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 NBPF14Q5TI25 921 aa6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 MRPL14Q6P1L8 145 aaKnown RBP6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 PURBQ96QR8 312 aaKnown RBP6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 C1QTNF2Q9BXJ5 285 aa6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 HMX1Q9NP08 348 aaPredicted RBP6.21□□□□□ -1.42
SUB1P3-201ENST00000564581 FSHRP23945 695 aa6.2□□□□□ -1.42
SUB1P3-201ENST00000564581 VASH1Q7L8A9 365 aaPredicted RBP6.2□□□□□ -1.42
SUB1P3-201ENST00000564581 FKBPLQ9UIM3 349 aa6.2□□□□□ -1.42
SUB1P3-201ENST00000564581 RFC5P40937 340 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 NR5A1Q13285 461 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 ERFEQ4G0M1 354 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 C6orf118Q5T5N4 469 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 OCSTAMPQ9BR26 566 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 ARHGAP9Q9BRR9 750 aa6.19□□□□□ -1.42
SUB1P3-201ENST00000564581 PDXDC2PQ6P474 469 aa6.18□□□□□ -1.42
SUB1P3-201ENST00000564581 USP17L8P0C7I0 530 aa6.17□□□□□ -1.42
SUB1P3-201ENST00000564581 BRPF1P55201 1214 aaPredicted RBP6.17□□□□□ -1.42
SUB1P3-201ENST00000564581 TRMT44Q8IYL2 757 aaKnown RBP6.17□□□□□ -1.42
SUB1P3-201ENST00000564581 SCARF1Q14162 830 aa6.16□□□□□ -1.42
SUB1P3-201ENST00000564581 ZBTB33Q86T24 672 aa6.16□□□□□ -1.42
SUB1P3-201ENST00000564581 GPKOWQ92917 476 aaPredicted RBP eCLIP6.16□□□□□ -1.42
SUB1P3-201ENST00000564581 PCMTD1Q96MG8 357 aaPredicted RBP6.16□□□□□ -1.42
SUB1P3-201ENST00000564581 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms