RNA–Protein interactions for RNA: ENST00000564531.1

AC025259.3-201, humanhuman

TSL 3 BASIC

Gene AC025259.3, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025259.3-201ENST00000564531 SSH2Q76I76 1423 aa24.01■■□□□ 1.43
AC025259.3-201ENST00000564531 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
AC025259.3-201ENST00000564531 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
AC025259.3-201ENST00000564531 ZNF335Q9H4Z2 1342 aaPredicted RBP24.01■■□□□ 1.43
AC025259.3-201ENST00000564531 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
AC025259.3-201ENST00000564531 C1orf167Q5SNV9 1468 aa24■■□□□ 1.43
AC025259.3-201ENST00000564531 RGPD8O14715 1765 aaPredicted RBP23.99■■□□□ 1.43
AC025259.3-201ENST00000564531 PMFBP1Q8TBY8 1022 aa23.99■■□□□ 1.43
AC025259.3-201ENST00000564531 COG3Q96JB2 828 aa23.99■■□□□ 1.43
AC025259.3-201ENST00000564531 CFAP53Q96M91 514 aa23.99■■□□□ 1.43
AC025259.3-201ENST00000564531 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
AC025259.3-201ENST00000564531 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
AC025259.3-201ENST00000564531 MST1RQ04912 1400 aa23.98■■□□□ 1.43
AC025259.3-201ENST00000564531 AATKQ6ZMQ8 1374 aa23.95■■□□□ 1.42
AC025259.3-201ENST00000564531 USP31Q70CQ4 1352 aa23.94■■□□□ 1.42
AC025259.3-201ENST00000564531 NME9Q86XW9 330 aa23.94■■□□□ 1.42
AC025259.3-201ENST00000564531 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
AC025259.3-201ENST00000564531 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
AC025259.3-201ENST00000564531 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
AC025259.3-201ENST00000564531 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
AC025259.3-201ENST00000564531 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
AC025259.3-201ENST00000564531 PSME1Q06323 249 aa23.9■■□□□ 1.42
AC025259.3-201ENST00000564531 USP54Q70EL1 1684 aa23.89■■□□□ 1.42
AC025259.3-201ENST00000564531 MTHFSP49914 203 aa23.89■■□□□ 1.41
AC025259.3-201ENST00000564531 SMG6Q86US8 1419 aaKnown RBP23.89■■□□□ 1.41
AC025259.3-201ENST00000564531 HNRNPUQ00839 825 aaKnown RBP eCLIP23.87■■□□□ 1.41
AC025259.3-201ENST00000564531 ORAI2Q96SN7 254 aa23.87■■□□□ 1.41
AC025259.3-201ENST00000564531 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
AC025259.3-201ENST00000564531 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
AC025259.3-201ENST00000564531 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
AC025259.3-201ENST00000564531 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
AC025259.3-201ENST00000564531 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
AC025259.3-201ENST00000564531 PNPLA6Q8IY17 1366 aa23.83■■□□□ 1.41
AC025259.3-201ENST00000564531 NUDCQ9Y266 331 aa23.83■■□□□ 1.41
AC025259.3-201ENST00000564531 PAK3O75914 559 aaPredicted RBP23.82■■□□□ 1.4
AC025259.3-201ENST00000564531 ABTB2Q8N961 1025 aa23.82■■□□□ 1.4
AC025259.3-201ENST00000564531 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 SBNO1A3KN83 1393 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 FOXO3O43524 673 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 NLRP6P59044 892 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 POLKQ9UBT6 870 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 ZBED9Q6R2W3 1325 aa23.81■■□□□ 1.4
AC025259.3-201ENST00000564531 KRT28Q7Z3Y7 464 aa23.8■■□□□ 1.4
AC025259.3-201ENST00000564531 SLAIN2Q9P270 581 aa23.8■■□□□ 1.4
AC025259.3-201ENST00000564531 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
AC025259.3-201ENST00000564531 KIF24Q5T7B8 1368 aa23.79■■□□□ 1.4
AC025259.3-201ENST00000564531 COL3A1P02461 1466 aaPredicted RBP23.79■■□□□ 1.4
AC025259.3-201ENST00000564531 TRPM3Q9HCF6 1732 aaPredicted RBP23.79■■□□□ 1.4
AC025259.3-201ENST00000564531 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
AC025259.3-201ENST00000564531 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
AC025259.3-201ENST00000564531 DIAPH1O60610 1272 aaKnown RBP23.76■■□□□ 1.39
AC025259.3-201ENST00000564531 NGEFQ8N5V2 710 aa23.76■■□□□ 1.39
AC025259.3-201ENST00000564531 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
AC025259.3-201ENST00000564531 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
AC025259.3-201ENST00000564531 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
AC025259.3-201ENST00000564531 MAP2P11137 1827 aaKnown RBP23.73■■□□□ 1.39
AC025259.3-201ENST00000564531 EMILIN1Q9Y6C2 1016 aa23.72■■□□□ 1.39
AC025259.3-201ENST00000564531 RTL1A6NKG5 1358 aa23.72■■□□□ 1.39
AC025259.3-201ENST00000564531 ARHGEF10O15013 1369 aa23.72■■□□□ 1.39
AC025259.3-201ENST00000564531 PXDNQ92626 1479 aa23.72■■□□□ 1.39
AC025259.3-201ENST00000564531 MARF1Q9Y4F3 1742 aaKnown RBP23.71■■□□□ 1.39
AC025259.3-201ENST00000564531 SLIT3O75094 1523 aa23.71■■□□□ 1.39
AC025259.3-201ENST00000564531 TNS3Q68CZ2 1445 aa23.71■■□□□ 1.39
AC025259.3-201ENST00000564531 FLT4P35916 1363 aa23.71■■□□□ 1.39
AC025259.3-201ENST00000564531 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
AC025259.3-201ENST00000564531 ALS2Q96Q42 1657 aa23.7■■□□□ 1.39
AC025259.3-201ENST00000564531 USP19O94966 1318 aa23.7■■□□□ 1.38
AC025259.3-201ENST00000564531 RRS1Q15050 365 aaKnown RBP23.69■■□□□ 1.38
AC025259.3-201ENST00000564531 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
AC025259.3-201ENST00000564531 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
AC025259.3-201ENST00000564531 MAP3K19Q56UN5 1328 aa23.67■■□□□ 1.38
AC025259.3-201ENST00000564531 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
AC025259.3-201ENST00000564531 RUNDC1Q96C34 613 aa23.67■■□□□ 1.38
AC025259.3-201ENST00000564531 NFAT5O94916 1531 aa23.67■■□□□ 1.38
AC025259.3-201ENST00000564531 IQSEC2Q5JU85 1478 aa23.67■■□□□ 1.38
AC025259.3-201ENST00000564531 U2SURPO15042 1029 aaKnown RBP23.66■■□□□ 1.38
AC025259.3-201ENST00000564531 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
AC025259.3-201ENST00000564531 NUTM2GQ5VZR2 741 aa23.66■■□□□ 1.38
AC025259.3-201ENST00000564531 SOS2Q07890 1332 aaPredicted RBP23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 SPATA31A3Q5VYP0 1347 aa23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 AMPHP49418 695 aa23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 NHSL1Q5SYE7 1610 aa23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 MED1Q15648 1581 aaPredicted RBP23.65■■□□□ 1.38
AC025259.3-201ENST00000564531 PHRF1Q9P1Y6 1649 aaKnown RBP23.64■■□□□ 1.38
AC025259.3-201ENST00000564531 IL13P35225 146 aa23.64■■□□□ 1.37
AC025259.3-201ENST00000564531 FCHSD2O94868 740 aa23.63■■□□□ 1.37
AC025259.3-201ENST00000564531 FBLN1P23142 703 aa23.63■■□□□ 1.37
AC025259.3-201ENST00000564531 SOX12O15370 315 aa23.62■■□□□ 1.37
AC025259.3-201ENST00000564531 NEFMP07197 916 aa23.62■■□□□ 1.37
AC025259.3-201ENST00000564531 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
AC025259.3-201ENST00000564531 GCP02774 474 aa23.61■■□□□ 1.37
AC025259.3-201ENST00000564531 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
AC025259.3-201ENST00000564531 TOM1O60784 492 aa23.59■■□□□ 1.37
AC025259.3-201ENST00000564531 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
AC025259.3-201ENST00000564531 ABCC6O95255 1503 aa23.59■■□□□ 1.37
AC025259.3-201ENST00000564531 HOXC9P31274 260 aa23.58■■□□□ 1.37
AC025259.3-201ENST00000564531 EIF4A2Q14240 407 aaKnown RBP23.58■■□□□ 1.37
AC025259.3-201ENST00000564531 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms