RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 BAP1Q92560 729 aa7.38□□□□□ -1.23
CAPN3-212ENST00000564503 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
CAPN3-212ENST00000564503 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-212ENST00000564503 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-212ENST00000564503 LILRB3O75022 631 aa7.37□□□□□ -1.23
CAPN3-212ENST00000564503 CTC1Q2NKJ3 1217 aa7.37□□□□□ -1.23
CAPN3-212ENST00000564503 NUTM2DQ5VT03 806 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-212ENST00000564503 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-212ENST00000564503 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
CAPN3-212ENST00000564503 RB1CC1Q8TDY2 1594 aa7.37□□□□□ -1.23
CAPN3-212ENST00000564503 SIAH2O43255 324 aa7.36□□□□□ -1.23
CAPN3-212ENST00000564503 CTHP32929 405 aa7.36□□□□□ -1.23
CAPN3-212ENST00000564503 SMCPP49901 116 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-212ENST00000564503 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
CAPN3-212ENST00000564503 EHBP1Q8NDI1 1231 aa7.36□□□□□ -1.23
CAPN3-212ENST00000564503 GPBP1L1Q9HC44 474 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-212ENST00000564503 POLR3EQ9NVU0 708 aa7.36□□□□□ -1.23
CAPN3-212ENST00000564503 ALDH1A1P00352 501 aa7.35□□□□□ -1.23
CAPN3-212ENST00000564503 CLK2P49760 499 aaKnown RBP7.35□□□□□ -1.23
CAPN3-212ENST00000564503 RTL5Q5HYW3 569 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-212ENST00000564503 HPS1Q92902 700 aa7.35□□□□□ -1.23
CAPN3-212ENST00000564503 KDM4CQ9H3R0 1056 aa7.35□□□□□ -1.23
CAPN3-212ENST00000564503 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-212ENST00000564503 ZNF511Q8NB15 262 aa7.34□□□□□ -1.23
CAPN3-212ENST00000564503 TSC1Q92574 1164 aa7.34□□□□□ -1.23
CAPN3-212ENST00000564503 MAP10Q9P2G4 905 aa7.34□□□□□ -1.23
CAPN3-212ENST00000564503 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-212ENST00000564503 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-212ENST00000564503 FAM117AQ9C073 453 aa7.33□□□□□ -1.24
CAPN3-212ENST00000564503 SCRIBQ14160 1630 aa7.32□□□□□ -1.24
CAPN3-212ENST00000564503 VARSP26640 1264 aaKnown RBP7.31□□□□□ -1.24
CAPN3-212ENST00000564503 SKIV2LQ15477 1246 aaKnown RBP7.31□□□□□ -1.24
CAPN3-212ENST00000564503 GMPR2Q9P2T1 348 aaKnown RBP7.31□□□□□ -1.24
CAPN3-212ENST00000564503 DDRGK1Q96HY6 314 aa7.3□□□□□ -1.24
CAPN3-212ENST00000564503 WASF2Q9Y6W5 498 aa7.3□□□□□ -1.24
CAPN3-212ENST00000564503 PLEKHG3A1L390 1219 aa7.29□□□□□ -1.24
CAPN3-212ENST00000564503 SH3D19Q5HYK7 790 aa7.29□□□□□ -1.24
CAPN3-212ENST00000564503 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-212ENST00000564503 HELBQ8NG08 1087 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-212ENST00000564503 FOXJ1Q92949 421 aa7.29□□□□□ -1.24
CAPN3-212ENST00000564503 ATP13A2Q9NQ11 1180 aa7.29□□□□□ -1.24
CAPN3-212ENST00000564503 C11orf95C9JLR9 678 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-212ENST00000564503 FBXO31Q5XUX0 539 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-212ENST00000564503 MPNDQ8N594 471 aa7.28□□□□□ -1.24
CAPN3-212ENST00000564503 TLL2Q9Y6L7 1015 aa7.28□□□□□ -1.24
CAPN3-212ENST00000564503 RSF1Q96T23 1441 aaPredicted RBP7.27□□□□□ -1.24
CAPN3-212ENST00000564503 CTDSPL2Q05D32 466 aa7.27□□□□□ -1.25
CAPN3-212ENST00000564503 FAM174AQ8TBP5 190 aa7.26□□□□□ -1.25
CAPN3-212ENST00000564503 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.26□□□□□ -1.25
CAPN3-212ENST00000564503 ATP1B4Q9UN42 357 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-212ENST00000564503 AGERQ15109 404 aa7.25□□□□□ -1.25
CAPN3-212ENST00000564503 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
CAPN3-212ENST00000564503 ARMC2Q8NEN0 867 aa7.25□□□□□ -1.25
CAPN3-212ENST00000564503 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-212ENST00000564503 SNRPBP14678 240 aaKnown RBP7.24□□□□□ -1.25
CAPN3-212ENST00000564503 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
CAPN3-212ENST00000564503 BPHLQ86WA6 291 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-212ENST00000564503 CDK15Q96Q40 435 aa7.24□□□□□ -1.25
CAPN3-212ENST00000564503 NNTQ13423 1086 aa7.23□□□□□ -1.25
CAPN3-212ENST00000564503 ARID5BQ14865 1188 aa7.23□□□□□ -1.25
CAPN3-212ENST00000564503 LRRN4Q8WUT4 740 aa7.23□□□□□ -1.25
CAPN3-212ENST00000564503 TRIM47Q96LD4 638 aa7.23□□□□□ -1.25
CAPN3-212ENST00000564503 SENP2Q9HC62 589 aa7.23□□□□□ -1.25
CAPN3-212ENST00000564503 EIF4G1Q04637 1599 aaKnown RBP7.23□□□□□ -1.25
CAPN3-212ENST00000564503 ADH1CP00326 375 aa7.22□□□□□ -1.25
CAPN3-212ENST00000564503 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.25
CAPN3-212ENST00000564503 GRM5P41594 1212 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 NBPF14Q5TI25 921 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 SH3BP5LQ7L8J4 393 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 SH3RF1Q7Z6J0 888 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 WIZO95785 1651 aa7.21□□□□□ -1.26
CAPN3-212ENST00000564503 AP1G2O75843 785 aa7.2□□□□□ -1.26
CAPN3-212ENST00000564503 BMP1P13497 986 aa7.2□□□□□ -1.26
CAPN3-212ENST00000564503 TREML4Q6UXN2 200 aa7.2□□□□□ -1.26
CAPN3-212ENST00000564503 KIFC2Q96AC6 838 aa7.2□□□□□ -1.26
CAPN3-212ENST00000564503 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
CAPN3-212ENST00000564503 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-212ENST00000564503 TIMP2P16035 220 aa7.19□□□□□ -1.26
CAPN3-212ENST00000564503 WDR4P57081 412 aaKnown RBP7.19□□□□□ -1.26
CAPN3-212ENST00000564503 NR6A1Q15406 480 aa7.19□□□□□ -1.26
CAPN3-212ENST00000564503 IL27Q8NEV9 243 aa7.19□□□□□ -1.26
CAPN3-212ENST00000564503 GPKOWQ92917 476 aaPredicted RBP eCLIP7.19□□□□□ -1.26
CAPN3-212ENST00000564503 NACADO15069 1562 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 MAGEB6P1A0A0J9YX57 407 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 NR3C2P08235 984 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 NR5A1Q13285 461 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-212ENST00000564503 GOPCQ9HD26 462 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 FKBPLQ9UIM3 349 aa7.18□□□□□ -1.26
CAPN3-212ENST00000564503 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
CAPN3-212ENST00000564503 RFC5P40937 340 aa7.17□□□□□ -1.26
CAPN3-212ENST00000564503 PDXDC2PQ6P474 469 aa7.17□□□□□ -1.26
CAPN3-212ENST00000564503 TRMT44Q8IYL2 757 aaKnown RBP7.17□□□□□ -1.26
CAPN3-212ENST00000564503 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-212ENST00000564503 CARD14Q9BXL6 1004 aa7.17□□□□□ -1.26
CAPN3-212ENST00000564503 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-212ENST00000564503 BRPF1P55201 1214 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-212ENST00000564503 VASH1Q7L8A9 365 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms