RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
UBFD1-203ENST00000564106 LMOD2Q6P5Q4 547 aa13.63□□□□□ -0.23
UBFD1-203ENST00000564106 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
UBFD1-203ENST00000564106 FAM83GA6ND36 823 aa13.62□□□□□ -0.23
UBFD1-203ENST00000564106 PSME1Q06323 249 aa13.62□□□□□ -0.23
UBFD1-203ENST00000564106 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
UBFD1-203ENST00000564106 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
UBFD1-203ENST00000564106 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
UBFD1-203ENST00000564106 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
UBFD1-203ENST00000564106 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
UBFD1-203ENST00000564106 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
UBFD1-203ENST00000564106 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
UBFD1-203ENST00000564106 COL14A1Q05707 1796 aaKnown RBP13.59□□□□□ -0.23
UBFD1-203ENST00000564106 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
UBFD1-203ENST00000564106 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.23
UBFD1-203ENST00000564106 USP47Q96K76 1375 aa13.58□□□□□ -0.23
UBFD1-203ENST00000564106 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
UBFD1-203ENST00000564106 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
UBFD1-203ENST00000564106 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.24
UBFD1-203ENST00000564106 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
UBFD1-203ENST00000564106 VPS72Q15906 364 aa13.56□□□□□ -0.24
UBFD1-203ENST00000564106 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
UBFD1-203ENST00000564106 ACEP12821 1306 aa13.56□□□□□ -0.24
UBFD1-203ENST00000564106 EIF3AQ14152 1382 aaKnown RBP13.56□□□□□ -0.24
UBFD1-203ENST00000564106 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
UBFD1-203ENST00000564106 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
UBFD1-203ENST00000564106 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
UBFD1-203ENST00000564106 SRCAPQ6ZRS2 3230 aa13.55□□□□□ -0.24
UBFD1-203ENST00000564106 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
UBFD1-203ENST00000564106 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
UBFD1-203ENST00000564106 BTG4Q9NY30 223 aa13.54□□□□□ -0.24
UBFD1-203ENST00000564106 KIAA0232Q92628 1395 aa13.54□□□□□ -0.24
UBFD1-203ENST00000564106 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
UBFD1-203ENST00000564106 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
UBFD1-203ENST00000564106 CHRNA2Q15822 529 aa13.53□□□□□ -0.24
UBFD1-203ENST00000564106 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
UBFD1-203ENST00000564106 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.25
UBFD1-203ENST00000564106 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
UBFD1-203ENST00000564106 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
UBFD1-203ENST00000564106 PIK3C2AO00443 1686 aa13.52□□□□□ -0.25
UBFD1-203ENST00000564106 CAMTA1Q9Y6Y1 1673 aa13.51□□□□□ -0.25
UBFD1-203ENST00000564106 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
UBFD1-203ENST00000564106 DEFB132Q7Z7B7 95 aa13.51□□□□□ -0.25
UBFD1-203ENST00000564106 ZC3H6P61129 1189 aaKnown RBP13.5□□□□□ -0.25
UBFD1-203ENST00000564106 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
UBFD1-203ENST00000564106 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
UBFD1-203ENST00000564106 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
UBFD1-203ENST00000564106 SSH2Q76I76 1423 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 USP19O94966 1318 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
UBFD1-203ENST00000564106 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
UBFD1-203ENST00000564106 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
UBFD1-203ENST00000564106 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
UBFD1-203ENST00000564106 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
UBFD1-203ENST00000564106 COL18A1P39060 1754 aa13.48□□□□□ -0.25
UBFD1-203ENST00000564106 USP6P35125 1406 aa13.47□□□□□ -0.25
UBFD1-203ENST00000564106 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
UBFD1-203ENST00000564106 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
UBFD1-203ENST00000564106 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
UBFD1-203ENST00000564106 SLIT3O75094 1523 aa13.47□□□□□ -0.25
UBFD1-203ENST00000564106 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
UBFD1-203ENST00000564106 KRT27Q7Z3Y8 459 aa13.45□□□□□ -0.26
UBFD1-203ENST00000564106 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
UBFD1-203ENST00000564106 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
UBFD1-203ENST00000564106 CD163L1Q9NR16 1453 aa13.44□□□□□ -0.26
UBFD1-203ENST00000564106 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
UBFD1-203ENST00000564106 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
UBFD1-203ENST00000564106 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
UBFD1-203ENST00000564106 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
UBFD1-203ENST00000564106 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
UBFD1-203ENST00000564106 CPDO75976 1380 aa13.43□□□□□ -0.26
UBFD1-203ENST00000564106 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
UBFD1-203ENST00000564106 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
UBFD1-203ENST00000564106 A0A0G2JS52 829 aa13.42□□□□□ -0.26
UBFD1-203ENST00000564106 MYT1Q01538 1121 aa13.42□□□□□ -0.26
UBFD1-203ENST00000564106 MIER1Q8N108 512 aa13.42□□□□□ -0.26
UBFD1-203ENST00000564106 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
UBFD1-203ENST00000564106 WNK3Q9BYP7 1800 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 NFAT5O94916 1531 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 ANP32CO43423 234 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 GCP02774 474 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
UBFD1-203ENST00000564106 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
UBFD1-203ENST00000564106 TMF1P82094 1093 aa13.4□□□□□ -0.26
UBFD1-203ENST00000564106 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
UBFD1-203ENST00000564106 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
UBFD1-203ENST00000564106 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
UBFD1-203ENST00000564106 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
UBFD1-203ENST00000564106 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
UBFD1-203ENST00000564106 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
UBFD1-203ENST00000564106 NLRP6P59044 892 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1082.3 ms