RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 EIF3AQ14152 1382 aaKnown RBP27.63■■■□□ 2.01
SLX1A-204ENST00000563995 CENPJQ9HC77 1338 aaPredicted RBP27.63■■■□□ 2.01
SLX1A-204ENST00000563995 ARHGEF10O15013 1369 aa27.62■■■□□ 2.01
SLX1A-204ENST00000563995 VPS72Q15906 364 aa27.62■■■□□ 2.01
SLX1A-204ENST00000563995 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
SLX1A-204ENST00000563995 CRYBG1Q9Y4K1 1723 aa27.61■■■□□ 2.01
SLX1A-204ENST00000563995 SEPT12Q8IYM1 358 aa27.6■■■□□ 2.01
SLX1A-204ENST00000563995 QRICH2Q9H0J4 1663 aa27.59■■■□□ 2.01
SLX1A-204ENST00000563995 HAP1P54257 671 aaPredicted RBP27.59■■■□□ 2.01
SLX1A-204ENST00000563995 HIRIP3Q9BW71 556 aaPredicted RBP27.59■■■□□ 2.01
SLX1A-204ENST00000563995 ONECUT3O60422 494 aaPredicted RBP27.58■■■□□ 2.01
SLX1A-204ENST00000563995 YY1P25490 414 aa27.58■■■□□ 2.01
SLX1A-204ENST00000563995 COL14A1Q05707 1796 aaKnown RBP27.57■■■□□ 2
SLX1A-204ENST00000563995 TULP4Q9NRJ4 1543 aa27.55■■■□□ 2
SLX1A-204ENST00000563995 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
SLX1A-204ENST00000563995 PLEKHG5O94827 1062 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 BAG6P46379 1132 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 FAM83GA6ND36 823 aa27.53■■■□□ 2
SLX1A-204ENST00000563995 LMOD2Q6P5Q4 547 aa27.53■■■□□ 2
SLX1A-204ENST00000563995 CCDC9Q9Y3X0 531 aaKnown RBP27.51■■□□□ 1.99
SLX1A-204ENST00000563995 ITSN1Q15811 1721 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 USP47Q96K76 1375 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 KRT27Q7Z3Y8 459 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
SLX1A-204ENST00000563995 RGPD1P0DJD0 1748 aa27.49■■□□□ 1.99
SLX1A-204ENST00000563995 THSD7AQ9UPZ6 1657 aa27.47■■□□□ 1.99
SLX1A-204ENST00000563995 CDK19Q9BWU1 502 aa27.47■■□□□ 1.99
SLX1A-204ENST00000563995 R3HDM1Q15032 1099 aaKnown RBP27.45■■□□□ 1.98
SLX1A-204ENST00000563995 TNS1Q9HBL0 1735 aaKnown RBP27.44■■□□□ 1.98
SLX1A-204ENST00000563995 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
SLX1A-204ENST00000563995 PHRF1Q9P1Y6 1649 aaKnown RBP27.44■■□□□ 1.98
SLX1A-204ENST00000563995 ATP7BP35670 1465 aa27.44■■□□□ 1.98
SLX1A-204ENST00000563995 EVC2Q86UK5 1308 aa27.43■■□□□ 1.98
SLX1A-204ENST00000563995 BTG4Q9NY30 223 aa27.43■■□□□ 1.98
SLX1A-204ENST00000563995 FAM98CQ17RN3 349 aaKnown RBP27.41■■□□□ 1.98
SLX1A-204ENST00000563995 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SLX1A-204ENST00000563995 SRPK2P78362 688 aaKnown RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 EN1Q05925 392 aaPredicted RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 TESK2Q96S53 571 aa27.4■■□□□ 1.98
SLX1A-204ENST00000563995 A0A0G2JS52 829 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 MYT1Q01538 1121 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SPATA31A5Q5VU36 1347 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SPATA31A7Q8IWB4 1347 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SLC24A1O60721 1099 aa27.35■■□□□ 1.97
SLX1A-204ENST00000563995 EIF4G2P78344 907 aaKnown RBP eCLIP27.34■■□□□ 1.97
SLX1A-204ENST00000563995 CCDC61Q9Y6R9 512 aa27.34■■□□□ 1.97
SLX1A-204ENST00000563995 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
SLX1A-204ENST00000563995 DISP2A7MBM2 1401 aa27.33■■□□□ 1.96
SLX1A-204ENST00000563995 PAK3O75914 559 aaPredicted RBP27.3■■□□□ 1.96
SLX1A-204ENST00000563995 HSPA5P11021 654 aaKnown RBP27.3■■□□□ 1.96
SLX1A-204ENST00000563995 PPIP5K1Q6PFW1 1433 aa27.3■■□□□ 1.96
SLX1A-204ENST00000563995 FAM182BQ5T319 152 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 KIAA0232Q92628 1395 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 NRKQ7Z2Y5 1582 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 TMF1P82094 1093 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 PUS7Q96PZ0 661 aaKnown RBP27.28■■□□□ 1.96
SLX1A-204ENST00000563995 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.95
SLX1A-204ENST00000563995 SPATA31A1Q5TZJ5 1347 aa27.26■■□□□ 1.95
SLX1A-204ENST00000563995 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
SLX1A-204ENST00000563995 IFFO2Q5TF58 517 aa27.24■■□□□ 1.95
SLX1A-204ENST00000563995 CABP1Q9NZU7 370 aa27.24■■□□□ 1.95
SLX1A-204ENST00000563995 ACEP12821 1306 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 EZH2Q15910 746 aaKnown RBP27.23■■□□□ 1.95
SLX1A-204ENST00000563995 RREB1Q92766 1687 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 CHRNA2Q15822 529 aa27.22■■□□□ 1.95
SLX1A-204ENST00000563995 SSH2Q76I76 1423 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
SLX1A-204ENST00000563995 CDCA8Q53HL2 280 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 CAMTA1Q9Y6Y1 1673 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 NUP188Q5SRE5 1749 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
SLX1A-204ENST00000563995 STRN4Q9NRL3 753 aa27.17■■□□□ 1.94
SLX1A-204ENST00000563995 NUTM2GQ5VZR2 741 aa27.16■■□□□ 1.94
SLX1A-204ENST00000563995 NINLQ9Y2I6 1382 aa27.16■■□□□ 1.94
SLX1A-204ENST00000563995 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
SLX1A-204ENST00000563995 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
SLX1A-204ENST00000563995 FAM196AQ6ZSG2 479 aa27.14■■□□□ 1.94
SLX1A-204ENST00000563995 TMC1Q8TDI8 760 aa27.14■■□□□ 1.94
SLX1A-204ENST00000563995 PPP1R1BQ9UD71 204 aaPredicted RBP27.14■■□□□ 1.94
SLX1A-204ENST00000563995 AKAP12Q02952 1782 aa27.14■■□□□ 1.93
SLX1A-204ENST00000563995 USP19O94966 1318 aa27.14■■□□□ 1.93
SLX1A-204ENST00000563995 CPDO75976 1380 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 SENP3-EIF4A1A0A087X0R7 540 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 TRIM37O94972 964 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 BARGINQ6ZT62 677 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 USP6P35125 1406 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 CPSF1Q10570 1443 aaKnown RBP27.13■■□□□ 1.93
SLX1A-204ENST00000563995 CD163L1Q9NR16 1453 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
SLX1A-204ENST00000563995 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
SLX1A-204ENST00000563995 PARD3Q8TEW0 1356 aa27.11■■□□□ 1.93
SLX1A-204ENST00000563995 ZNF692Q9BU19 519 aaPredicted RBP27.11■■□□□ 1.93
SLX1A-204ENST00000563995 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms