RNA–Protein interactions for RNA: ENST00000563964.5

LAT-208, Transcript of linker for activation of T cells, human

TSL 5

Gene LAT, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAT-208	ENST00000563964	ATAD2	Q6PL18	1390 aa		33.63	■■■□□ 2.97
LAT-208	ENST00000563964	ACE	P12821	1306 aa		33.63	■■■□□ 2.97
LAT-208	ENST00000563964	POLR3A	O14802	1390 aa	Predicted RBP	33.62	■■■□□ 2.97
LAT-208	ENST00000563964	QRICH2	Q9H0J4	1663 aa		33.62	■■■□□ 2.97
LAT-208	ENST00000563964	PLEKHG3	A1L390	1219 aa		33.62	■■■□□ 2.97
LAT-208	ENST00000563964	SRPK2	P78362	688 aa	Known RBP	33.62	■■■□□ 2.97
LAT-208	ENST00000563964	VPS72	Q15906	364 aa		33.6	■■■□□ 2.97
LAT-208	ENST00000563964	NBPF8	Q3BBV2	869 aa		33.6	■■■□□ 2.97
LAT-208	ENST00000563964	CRYBG1	Q9Y4K1	1723 aa		33.59	■■■□□ 2.97
LAT-208	ENST00000563964	CABP2	Q9NPB3	220 aa		33.59	■■■□□ 2.97
LAT-208	ENST00000563964	ROCK2	O75116	1388 aa	Known RBP	33.58	■■■□□ 2.97
LAT-208	ENST00000563964	CCDC9	Q9Y3X0	531 aa	Known RBP	33.56	■■■□□ 2.96
LAT-208	ENST00000563964	TRIM26	Q12899	539 aa	Predicted RBP	33.55	■■■□□ 2.96
LAT-208	ENST00000563964	PPIP5K1	Q6PFW1	1433 aa		33.54	■■■□□ 2.96
LAT-208	ENST00000563964	BTG4	Q9NY30	223 aa		33.54	■■■□□ 2.96
LAT-208	ENST00000563964	COL14A1	Q05707	1796 aa	Known RBP	33.54	■■■□□ 2.96
LAT-208	ENST00000563964	NUTM2G	Q5VZR2	741 aa		33.52	■■■□□ 2.96
LAT-208	ENST00000563964	NRAP	Q86VF7	1730 aa		33.51	■■■□□ 2.96
LAT-208	ENST00000563964	EP400	Q96L91	3159 aa		33.48	■■■□□ 2.95
LAT-208	ENST00000563964	SEPT12	Q8IYM1	358 aa		33.48	■■■□□ 2.95
LAT-208	ENST00000563964	PRDM11	Q9NQV5	511 aa		33.48	■■■□□ 2.95
LAT-208	ENST00000563964	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.48	■■■□□ 2.95
LAT-208	ENST00000563964	ONECUT3	O60422	494 aa	Predicted RBP	33.47	■■■□□ 2.95
LAT-208	ENST00000563964	CABP1	Q9NZU7	370 aa		33.47	■■■□□ 2.95
LAT-208	ENST00000563964	EVC2	Q86UK5	1308 aa		33.47	■■■□□ 2.95
LAT-208	ENST00000563964	ABTB2	Q8N961	1025 aa		33.46	■■■□□ 2.95
LAT-208	ENST00000563964	BRWD3	Q6RI45	1802 aa		33.46	■■■□□ 2.95
LAT-208	ENST00000563964	KIAA0232	Q92628	1395 aa		33.45	■■■□□ 2.94
LAT-208	ENST00000563964	TONSL	Q96HA7	1378 aa		33.43	■■■□□ 2.94
LAT-208	ENST00000563964	ZC3H6	P61129	1189 aa	Known RBP	33.42	■■■□□ 2.94
LAT-208	ENST00000563964	CHRNA2	Q15822	529 aa		33.41	■■■□□ 2.94
LAT-208	ENST00000563964	BRD4	O60885	1362 aa	Predicted RBP	33.39	■■■□□ 2.94
LAT-208	ENST00000563964	CCDC125	Q86Z20	511 aa		33.39	■■■□□ 2.94
LAT-208	ENST00000563964	FAM98C	Q17RN3	349 aa	Known RBP	33.38	■■■□□ 2.93
LAT-208	ENST00000563964	USP6	P35125	1406 aa		33.37	■■■□□ 2.93
LAT-208	ENST00000563964	USP19	O94966	1318 aa		33.37	■■■□□ 2.93
LAT-208	ENST00000563964	NLRP13	Q86W25	1043 aa		33.37	■■■□□ 2.93
LAT-208	ENST00000563964	CARD11	Q9BXL7	1154 aa		33.37	■■■□□ 2.93
LAT-208	ENST00000563964	SPATA31A5	Q5VU36	1347 aa		33.36	■■■□□ 2.93
LAT-208	ENST00000563964	SPATA31A7	Q8IWB4	1347 aa		33.36	■■■□□ 2.93
LAT-208	ENST00000563964	NRK	Q7Z2Y5	1582 aa		33.36	■■■□□ 2.93
LAT-208	ENST00000563964		A0A0G2JS52	829 aa		33.36	■■■□□ 2.93
LAT-208	ENST00000563964	MYT1	Q01538	1121 aa		33.36	■■■□□ 2.93
LAT-208	ENST00000563964	KRT27	Q7Z3Y8	459 aa		33.35	■■■□□ 2.93
LAT-208	ENST00000563964	STRN4	Q9NRL3	753 aa		33.32	■■■□□ 2.92
LAT-208	ENST00000563964	GC	P02774	474 aa		33.31	■■■□□ 2.92
LAT-208	ENST00000563964	CPD	O75976	1380 aa		33.3	■■■□□ 2.92
LAT-208	ENST00000563964	BLM	P54132	1417 aa	Predicted RBP	33.29	■■■□□ 2.92
LAT-208	ENST00000563964	SSH2	Q76I76	1423 aa		33.29	■■■□□ 2.92
LAT-208	ENST00000563964	NLRP6	P59044	892 aa		33.29	■■■□□ 2.92
LAT-208	ENST00000563964	SBNO2	Q9Y2G9	1366 aa		33.29	■■■□□ 2.92
LAT-208	ENST00000563964	SPATA31A1	Q5TZJ5	1347 aa		33.28	■■■□□ 2.92
LAT-208	ENST00000563964	ZNF692	Q9BU19	519 aa	Predicted RBP	33.27	■■■□□ 2.92
LAT-208	ENST00000563964	EVA1C	P58658	441 aa		33.26	■■■□□ 2.91
LAT-208	ENST00000563964	CAMTA1	Q9Y6Y1	1673 aa		33.26	■■■□□ 2.91
LAT-208	ENST00000563964	AKAP12	Q02952	1782 aa		33.24	■■■□□ 2.91
LAT-208	ENST00000563964	PIK3C2A	O00443	1686 aa		33.23	■■■□□ 2.91
LAT-208	ENST00000563964	LMO7	Q8WWI1	1683 aa		33.23	■■■□□ 2.91
LAT-208	ENST00000563964	THSD7A	Q9UPZ6	1657 aa		33.23	■■■□□ 2.91
LAT-208	ENST00000563964	TTC21B	Q7Z4L5	1316 aa		33.22	■■■□□ 2.91
LAT-208	ENST00000563964	CPSF1	Q10570	1443 aa	Known RBP	33.21	■■■□□ 2.91
LAT-208	ENST00000563964	SLIT3	O75094	1523 aa		33.21	■■■□□ 2.91
LAT-208	ENST00000563964	USP35	Q9P2H5	1018 aa		33.2	■■■□□ 2.91
LAT-208	ENST00000563964	SF3B2	Q13435	895 aa	Known RBP	33.19	■■■□□ 2.9
LAT-208	ENST00000563964	LARP1	Q6PKG0	1096 aa	Known RBP	33.19	■■■□□ 2.9
LAT-208	ENST00000563964	KTN1	Q86UP2	1357 aa	Known RBP	33.18	■■■□□ 2.9
LAT-208	ENST00000563964	ZBTB7C	A1YPR0	619 aa		33.17	■■■□□ 2.9
LAT-208	ENST00000563964	FAM182B	Q5T319	152 aa		33.17	■■■□□ 2.9
LAT-208	ENST00000563964	DEFB132	Q7Z7B7	95 aa		33.17	■■■□□ 2.9
LAT-208	ENST00000563964	TTC21A	Q8NDW8	1320 aa		33.16	■■■□□ 2.9
LAT-208	ENST00000563964	ZRANB1	Q9UGI0	708 aa		33.15	■■■□□ 2.9
LAT-208	ENST00000563964	COL5A2	P05997	1499 aa	Predicted RBP	33.13	■■■□□ 2.89
LAT-208	ENST00000563964	BARGIN	Q6ZT62	677 aa		33.13	■■■□□ 2.89
LAT-208	ENST00000563964	AATK	Q6ZMQ8	1374 aa		33.12	■■■□□ 2.89
LAT-208	ENST00000563964	MON2	Q7Z3U7	1717 aa		33.12	■■■□□ 2.89
LAT-208	ENST00000563964	TCP11L2	Q8N4U5	519 aa		33.11	■■■□□ 2.89
LAT-208	ENST00000563964	TMC1	Q8TDI8	760 aa		33.11	■■■□□ 2.89
LAT-208	ENST00000563964	ST20-MTHFS	A0A0A6YYL1	179 aa		33.09	■■■□□ 2.89
LAT-208	ENST00000563964	KCNH5	Q8NCM2	988 aa		33.09	■■■□□ 2.89
LAT-208	ENST00000563964	CD163L1	Q9NR16	1453 aa		33.09	■■■□□ 2.89
LAT-208	ENST00000563964	SLC12A5	Q9H2X9	1139 aa		33.08	■■■□□ 2.89
LAT-208	ENST00000563964	COL18A1	P39060	1754 aa		33.07	■■■□□ 2.88
LAT-208	ENST00000563964	SOX12	O15370	315 aa		33.06	■■■□□ 2.88
LAT-208	ENST00000563964	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.06	■■■□□ 2.88
LAT-208	ENST00000563964	PUS7	Q96PZ0	661 aa	Known RBP	33.06	■■■□□ 2.88
LAT-208	ENST00000563964	TESK2	Q96S53	571 aa		33.06	■■■□□ 2.88
LAT-208	ENST00000563964	THRAP3	Q9Y2W1	955 aa	Known RBP	33.06	■■■□□ 2.88
LAT-208	ENST00000563964	ARHGEF25	Q86VW2	580 aa		33.05	■■■□□ 2.88
LAT-208	ENST00000563964	AXIN2	Q9Y2T1	843 aa		33.05	■■■□□ 2.88
LAT-208	ENST00000563964	CRB1	P82279	1406 aa		33.04	■■■□□ 2.88
LAT-208	ENST00000563964	BAG6	P46379	1132 aa		33.04	■■■□□ 2.88
LAT-208	ENST00000563964	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.04	■■■□□ 2.88
LAT-208	ENST00000563964	RGPD1	P0DJD0	1748 aa		33.03	■■■□□ 2.88
LAT-208	ENST00000563964	PDE3B	Q13370	1112 aa		33.02	■■■□□ 2.88
LAT-208	ENST00000563964	FAM196A	Q6ZSG2	479 aa		33.01	■■■□□ 2.87
LAT-208	ENST00000563964	USP31	Q70CQ4	1352 aa		33	■■■□□ 2.87
LAT-208	ENST00000563964	NME9	Q86XW9	330 aa		33	■■■□□ 2.87
LAT-208	ENST00000563964	TERF2IP	Q9NYB0	399 aa		33	■■■□□ 2.87
LAT-208	ENST00000563964	NFAT5	O94916	1531 aa		33	■■■□□ 2.87
LAT-208	ENST00000563964	PCGF6	Q9BYE7	350 aa		32.99	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms