RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 KRT28Q7Z3Y7 464 aa37.1■■■■□ 3.53
SH3GL3-205ENST00000563901 AHDC1Q5TGY3 1603 aaPredicted RBP37.08■■■■□ 3.53
SH3GL3-205ENST00000563901 PHLPP1O60346 1717 aa37.07■■■■□ 3.52
SH3GL3-205ENST00000563901 CNGB1Q14028 1251 aaPredicted RBP37.07■■■■□ 3.52
SH3GL3-205ENST00000563901 TTC21BQ7Z4L5 1316 aa37.06■■■■□ 3.52
SH3GL3-205ENST00000563901 PIK3C2AO00443 1686 aa37.06■■■■□ 3.52
SH3GL3-205ENST00000563901 KNSTRNQ9Y448 316 aa37.06■■■■□ 3.52
SH3GL3-205ENST00000563901 PAK3O75914 559 aaPredicted RBP37.05■■■■□ 3.52
SH3GL3-205ENST00000563901 ALS2Q96Q42 1657 aa37.02■■■■□ 3.52
SH3GL3-205ENST00000563901 NME9Q86XW9 330 aa37.02■■■■□ 3.52
SH3GL3-205ENST00000563901 SOS2Q07890 1332 aaPredicted RBP37.01■■■■□ 3.52
SH3GL3-205ENST00000563901 AMER1Q5JTC6 1135 aaPredicted RBP36.99■■■■□ 3.51
SH3GL3-205ENST00000563901 ZRANB1Q9UGI0 708 aa36.99■■■■□ 3.51
SH3GL3-205ENST00000563901 COL16A1Q07092 1604 aaPredicted RBP36.99■■■■□ 3.51
SH3GL3-205ENST00000563901 MARF1Q9Y4F3 1742 aaKnown RBP36.98■■■■□ 3.51
SH3GL3-205ENST00000563901 ANKRD26Q9UPS8 1709 aa36.98■■■■□ 3.51
SH3GL3-205ENST00000563901 CGNL1Q0VF96 1302 aa36.97■■■■□ 3.51
SH3GL3-205ENST00000563901 CC2D1BQ5T0F9 858 aaKnown RBP36.97■■■■□ 3.51
SH3GL3-205ENST00000563901 FYB1O15117 783 aa36.96■■■■□ 3.51
SH3GL3-205ENST00000563901 NUTM2GQ5VZR2 741 aa36.96■■■■□ 3.51
SH3GL3-205ENST00000563901 GGNBP2Q9H3C7 697 aa36.96■■■■□ 3.51
SH3GL3-205ENST00000563901 TTC21AQ8NDW8 1320 aa36.96■■■■□ 3.51
SH3GL3-205ENST00000563901 SBNO1A3KN83 1393 aa36.95■■■■□ 3.51
SH3GL3-205ENST00000563901 DIEXFQ68CQ4 756 aaKnown RBP36.95■■■■□ 3.51
SH3GL3-205ENST00000563901 TNS3Q68CZ2 1445 aa36.95■■■■□ 3.51
SH3GL3-205ENST00000563901 BRD4O60885 1362 aaPredicted RBP36.95■■■■□ 3.5
SH3GL3-205ENST00000563901 LMOD2Q6P5Q4 547 aa36.94■■■■□ 3.5
SH3GL3-205ENST00000563901 ABTB2Q8N961 1025 aa36.92■■■■□ 3.5
SH3GL3-205ENST00000563901 SPATA31A3Q5VYP0 1347 aa36.91■■■■□ 3.5
SH3GL3-205ENST00000563901 PLEKHG5O94827 1062 aa36.9■■■■□ 3.5
SH3GL3-205ENST00000563901 USP54Q70EL1 1684 aa36.89■■■■□ 3.5
SH3GL3-205ENST00000563901 OVOS2A0A0J9YW53 1432 aa36.86■■■■□ 3.49
SH3GL3-205ENST00000563901 OVOS2Q6IE36 1432 aa36.86■■■■□ 3.49
SH3GL3-205ENST00000563901 NPC1L1Q9UHC9 1359 aa36.86■■■■□ 3.49
SH3GL3-205ENST00000563901 NLRP6P59044 892 aa36.85■■■■□ 3.49
SH3GL3-205ENST00000563901 NSD2O96028 1365 aa36.84■■■■□ 3.49
SH3GL3-205ENST00000563901 CRYBG1Q9Y4K1 1723 aa36.84■■■■□ 3.49
SH3GL3-205ENST00000563901 HSPA1LP34931 641 aa36.82■■■■□ 3.49
SH3GL3-205ENST00000563901 USP31Q70CQ4 1352 aa36.82■■■■□ 3.49
SH3GL3-205ENST00000563901 MED1Q15648 1581 aaPredicted RBP36.82■■■■□ 3.48
SH3GL3-205ENST00000563901 LRRC59Q96AG4 307 aaKnown RBP36.81■■■■□ 3.48
SH3GL3-205ENST00000563901 COG3Q96JB2 828 aa36.81■■■■□ 3.48
SH3GL3-205ENST00000563901 ARHGEF10O15013 1369 aa36.8■■■■□ 3.48
SH3GL3-205ENST00000563901 ABCA3Q99758 1704 aa36.8■■■■□ 3.48
SH3GL3-205ENST00000563901 PHRF1Q9P1Y6 1649 aaKnown RBP36.8■■■■□ 3.48
SH3GL3-205ENST00000563901 TNNT2P45379 298 aaPredicted RBP36.79■■■■□ 3.48
SH3GL3-205ENST00000563901 MORC1Q86VD1 984 aa36.78■■■■□ 3.48
SH3GL3-205ENST00000563901 SOX12O15370 315 aa36.77■■■■□ 3.48
SH3GL3-205ENST00000563901 FBLN1P23142 703 aa36.77■■■■□ 3.48
SH3GL3-205ENST00000563901 CABLES1Q8TDN4 633 aa36.77■■■■□ 3.48
SH3GL3-205ENST00000563901 PARD3Q8TEW0 1356 aa36.76■■■■□ 3.48
SH3GL3-205ENST00000563901 NLRP13Q86W25 1043 aa36.76■■■■□ 3.48
SH3GL3-205ENST00000563901 PNPLA6Q8IY17 1366 aa36.76■■■■□ 3.47
SH3GL3-205ENST00000563901 COL22A1Q8NFW1 1626 aaPredicted RBP36.75■■■■□ 3.47
SH3GL3-205ENST00000563901 PRKRIP1Q9H875 184 aaPredicted RBP36.74■■■■□ 3.47
SH3GL3-205ENST00000563901 SLIT3O75094 1523 aa36.74■■■■□ 3.47
SH3GL3-205ENST00000563901 SHPRHQ149N8 1683 aa36.73■■■■□ 3.47
SH3GL3-205ENST00000563901 USP19O94966 1318 aa36.72■■■■□ 3.47
SH3GL3-205ENST00000563901 ANP32CO43423 234 aa36.72■■■■□ 3.47
SH3GL3-205ENST00000563901 MAP2P11137 1827 aaKnown RBP36.72■■■■□ 3.47
SH3GL3-205ENST00000563901 FBXO41Q8TF61 875 aa36.71■■■■□ 3.47
SH3GL3-205ENST00000563901 NFAT5O94916 1531 aa36.69■■■■□ 3.46
SH3GL3-205ENST00000563901 LTN1O94822 1766 aa36.67■■■■□ 3.46
SH3GL3-205ENST00000563901 RALBP1Q15311 655 aa36.66■■■■□ 3.46
SH3GL3-205ENST00000563901 GCP02774 474 aa36.64■■■■□ 3.46
SH3GL3-205ENST00000563901 JCADQ9P266 1359 aa36.63■■■■□ 3.45
SH3GL3-205ENST00000563901 RRS1Q15050 365 aaKnown RBP36.63■■■■□ 3.45
SH3GL3-205ENST00000563901 PPP2R1AP30153 589 aa36.61■■■■□ 3.45
SH3GL3-205ENST00000563901 MIER1Q8N108 512 aa36.6■■■■□ 3.45
SH3GL3-205ENST00000563901 PEAK1Q9H792 1746 aa36.6■■■■□ 3.45
SH3GL3-205ENST00000563901 HAP1P54257 671 aaPredicted RBP36.58■■■■□ 3.45
SH3GL3-205ENST00000563901 KCNH5Q8NCM2 988 aa36.58■■■■□ 3.45
SH3GL3-205ENST00000563901 AATKQ6ZMQ8 1374 aa36.57■■■■□ 3.45
SH3GL3-205ENST00000563901 MYBBP1AQ9BQG0 1328 aaKnown RBP36.57■■■■□ 3.45
SH3GL3-205ENST00000563901 ZC3H6P61129 1189 aaKnown RBP36.57■■■■□ 3.44
SH3GL3-205ENST00000563901 EMILIN1Q9Y6C2 1016 aa36.57■■■■□ 3.44
SH3GL3-205ENST00000563901 ZBTB7CA1YPR0 619 aa36.56■■■■□ 3.44
SH3GL3-205ENST00000563901 POLKQ9UBT6 870 aa36.56■■■■□ 3.44
SH3GL3-205ENST00000563901 NUTM2BA6NNL0 878 aaPredicted RBP36.55■■■■□ 3.44
SH3GL3-205ENST00000563901 NUTM2EB1AL46 878 aaPredicted RBP36.55■■■■□ 3.44
SH3GL3-205ENST00000563901 NUTM2AQ8IVF1 878 aaPredicted RBP36.55■■■■□ 3.44
SH3GL3-205ENST00000563901 MAP3K19Q56UN5 1328 aa36.54■■■■□ 3.44
SH3GL3-205ENST00000563901 PPM1GO15355 546 aaPredicted RBP36.52■■■■□ 3.44
SH3GL3-205ENST00000563901 MTHFSP49914 203 aa36.52■■■■□ 3.44
SH3GL3-205ENST00000563901 KIAA0232Q92628 1395 aa36.52■■■■□ 3.44
SH3GL3-205ENST00000563901 RGPD5Q99666 1765 aa36.52■■■■□ 3.44
SH3GL3-205ENST00000563901 SMG6Q86US8 1419 aaKnown RBP36.5■■■■□ 3.43
SH3GL3-205ENST00000563901 ARHGEF25Q86VW2 580 aa36.49■■■■□ 3.43
SH3GL3-205ENST00000563901 LRP6O75581 1613 aa36.48■■■■□ 3.43
SH3GL3-205ENST00000563901 COL18A1P39060 1754 aa36.48■■■■□ 3.43
SH3GL3-205ENST00000563901 CCDC184Q52MB2 194 aa36.48■■■■□ 3.43
SH3GL3-205ENST00000563901 CHRNA2Q15822 529 aa36.47■■■■□ 3.43
SH3GL3-205ENST00000563901 ADAMTS2O95450 1211 aa36.46■■■■□ 3.43
SH3GL3-205ENST00000563901 CPDO75976 1380 aa36.45■■■■□ 3.43
SH3GL3-205ENST00000563901 AMPHP49418 695 aa36.44■■■■□ 3.42
SH3GL3-205ENST00000563901 SPATA31A6Q5VVP1 1343 aa36.44■■■■□ 3.42
SH3GL3-205ENST00000563901 PRDM11Q9NQV5 511 aa36.43■■■■□ 3.42
SH3GL3-205ENST00000563901 CDK12Q9NYV4 1490 aaPredicted RBP36.43■■■■□ 3.42
SH3GL3-205ENST00000563901 LMO7Q8WWI1 1683 aa36.41■■■■□ 3.42
SH3GL3-205ENST00000563901 FLT4P35916 1363 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms