RNA–Protein interactions for RNA: ENST00000563734.1

AC009065.4-201, humanhuman

TSL 3 BASIC

Gene AC009065.4, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.4-201ENST00000563734 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
AC009065.4-201ENST00000563734 CENPJQ9HC77 1338 aaPredicted RBP18.47■□□□□ 0.55
AC009065.4-201ENST00000563734 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
AC009065.4-201ENST00000563734 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
AC009065.4-201ENST00000563734 FAM83GA6ND36 823 aa18.45■□□□□ 0.54
AC009065.4-201ENST00000563734 PAK3O75914 559 aaPredicted RBP18.44■□□□□ 0.54
AC009065.4-201ENST00000563734 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
AC009065.4-201ENST00000563734 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
AC009065.4-201ENST00000563734 ACEP12821 1306 aa18.43■□□□□ 0.54
AC009065.4-201ENST00000563734 BRWD3Q6RI45 1802 aa18.42■□□□□ 0.54
AC009065.4-201ENST00000563734 EP400Q96L91 3159 aa18.41■□□□□ 0.54
AC009065.4-201ENST00000563734 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
AC009065.4-201ENST00000563734 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
AC009065.4-201ENST00000563734 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
AC009065.4-201ENST00000563734 ONECUT3O60422 494 aaPredicted RBP18.4■□□□□ 0.54
AC009065.4-201ENST00000563734 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
AC009065.4-201ENST00000563734 BTG4Q9NY30 223 aa18.4■□□□□ 0.54
AC009065.4-201ENST00000563734 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
AC009065.4-201ENST00000563734 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
AC009065.4-201ENST00000563734 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
AC009065.4-201ENST00000563734 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
AC009065.4-201ENST00000563734 CABP2Q9NPB3 220 aa18.38■□□□□ 0.53
AC009065.4-201ENST00000563734 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
AC009065.4-201ENST00000563734 PRDM11Q9NQV5 511 aa18.37■□□□□ 0.53
AC009065.4-201ENST00000563734 BRD4O60885 1362 aaPredicted RBP18.37■□□□□ 0.53
AC009065.4-201ENST00000563734 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
AC009065.4-201ENST00000563734 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
AC009065.4-201ENST00000563734 USP19O94966 1318 aa18.34■□□□□ 0.53
AC009065.4-201ENST00000563734 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
AC009065.4-201ENST00000563734 SPATA31A5Q5VU36 1347 aa18.33■□□□□ 0.53
AC009065.4-201ENST00000563734 SPATA31A7Q8IWB4 1347 aa18.33■□□□□ 0.53
AC009065.4-201ENST00000563734 NUTM2GQ5VZR2 741 aa18.33■□□□□ 0.52
AC009065.4-201ENST00000563734 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
AC009065.4-201ENST00000563734 USP6P35125 1406 aa18.32■□□□□ 0.52
AC009065.4-201ENST00000563734 THSD7AQ9UPZ6 1657 aa18.32■□□□□ 0.52
AC009065.4-201ENST00000563734 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
AC009065.4-201ENST00000563734 KRT27Q7Z3Y8 459 aa18.32■□□□□ 0.52
AC009065.4-201ENST00000563734 CPDO75976 1380 aa18.31■□□□□ 0.52
AC009065.4-201ENST00000563734 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
AC009065.4-201ENST00000563734 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
AC009065.4-201ENST00000563734 CHRNA2Q15822 529 aa18.3■□□□□ 0.52
AC009065.4-201ENST00000563734 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
AC009065.4-201ENST00000563734 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
AC009065.4-201ENST00000563734 A0A0G2JS52 829 aa18.29■□□□□ 0.52
AC009065.4-201ENST00000563734 MYT1Q01538 1121 aa18.29■□□□□ 0.52
AC009065.4-201ENST00000563734 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
AC009065.4-201ENST00000563734 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
AC009065.4-201ENST00000563734 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
AC009065.4-201ENST00000563734 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
AC009065.4-201ENST00000563734 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
AC009065.4-201ENST00000563734 SLIT3O75094 1523 aa18.28■□□□□ 0.52
AC009065.4-201ENST00000563734 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
AC009065.4-201ENST00000563734 CAMTA1Q9Y6Y1 1673 aa18.27■□□□□ 0.52
AC009065.4-201ENST00000563734 GCP02774 474 aa18.26■□□□□ 0.51
AC009065.4-201ENST00000563734 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
AC009065.4-201ENST00000563734 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
AC009065.4-201ENST00000563734 SF3B2Q13435 895 aaKnown RBP18.25■□□□□ 0.51
AC009065.4-201ENST00000563734 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
AC009065.4-201ENST00000563734 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
AC009065.4-201ENST00000563734 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
AC009065.4-201ENST00000563734 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
AC009065.4-201ENST00000563734 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
AC009065.4-201ENST00000563734 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
AC009065.4-201ENST00000563734 EVA1CP58658 441 aa18.22■□□□□ 0.51
AC009065.4-201ENST00000563734 NLRP6P59044 892 aa18.22■□□□□ 0.51
AC009065.4-201ENST00000563734 DEFB132Q7Z7B7 95 aa18.22■□□□□ 0.51
AC009065.4-201ENST00000563734 MON2Q7Z3U7 1717 aa18.22■□□□□ 0.51
AC009065.4-201ENST00000563734 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
AC009065.4-201ENST00000563734 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
AC009065.4-201ENST00000563734 LARP1Q6PKG0 1096 aaKnown RBP18.2■□□□□ 0.5
AC009065.4-201ENST00000563734 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
AC009065.4-201ENST00000563734 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
AC009065.4-201ENST00000563734 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
AC009065.4-201ENST00000563734 COL18A1P39060 1754 aa18.18■□□□□ 0.5
AC009065.4-201ENST00000563734 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
AC009065.4-201ENST00000563734 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
AC009065.4-201ENST00000563734 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 CRB1P82279 1406 aa18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 BAG6P46379 1132 aa18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 THRAP3Q9Y2W1 955 aaKnown RBP18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 PARP4Q9UKK3 1724 aaKnown RBP18.17■□□□□ 0.5
AC009065.4-201ENST00000563734 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
AC009065.4-201ENST00000563734 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
AC009065.4-201ENST00000563734 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
AC009065.4-201ENST00000563734 KCNH5Q8NCM2 988 aa18.16■□□□□ 0.5
AC009065.4-201ENST00000563734 NFAT5O94916 1531 aa18.15■□□□□ 0.5
AC009065.4-201ENST00000563734 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
AC009065.4-201ENST00000563734 FAM196AQ6ZSG2 479 aa18.14■□□□□ 0.49
AC009065.4-201ENST00000563734 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
AC009065.4-201ENST00000563734 ABCC6O95255 1503 aa18.13■□□□□ 0.49
AC009065.4-201ENST00000563734 ARHGEF25Q86VW2 580 aa18.13■□□□□ 0.49
AC009065.4-201ENST00000563734 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
AC009065.4-201ENST00000563734 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
AC009065.4-201ENST00000563734 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
AC009065.4-201ENST00000563734 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
AC009065.4-201ENST00000563734 RGPD5Q99666 1765 aa18.1■□□□□ 0.49
AC009065.4-201ENST00000563734 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
AC009065.4-201ENST00000563734 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
AC009065.4-201ENST00000563734 EN1Q05925 392 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms