RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 STAG3Q9UJ98 1225 aa12.87□□□□□ -0.35
PDXDC1-210ENST00000563679 TNRQ92752 1358 aa12.87□□□□□ -0.35
PDXDC1-210ENST00000563679 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
PDXDC1-210ENST00000563679 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
PDXDC1-210ENST00000563679 METP08581 1390 aa12.86□□□□□ -0.35
PDXDC1-210ENST00000563679 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
PDXDC1-210ENST00000563679 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
PDXDC1-210ENST00000563679 LRRC7Q96NW7 1537 aa12.85□□□□□ -0.35
PDXDC1-210ENST00000563679 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
PDXDC1-210ENST00000563679 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-210ENST00000563679 CDK12Q9NYV4 1490 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-210ENST00000563679 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
PDXDC1-210ENST00000563679 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDXDC1-210ENST00000563679 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
PDXDC1-210ENST00000563679 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
PDXDC1-210ENST00000563679 ADAMTS13Q76LX8 1427 aa12.84□□□□□ -0.35
PDXDC1-210ENST00000563679 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
PDXDC1-210ENST00000563679 TMPOP42166 694 aaKnown RBP12.82□□□□□ -0.36
PDXDC1-210ENST00000563679 SLIT1O75093 1534 aa12.82□□□□□ -0.36
PDXDC1-210ENST00000563679 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
PDXDC1-210ENST00000563679 WAPLQ7Z5K2 1190 aa12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 CLUAP1Q96AJ1 413 aa12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 FCHSD2O94868 740 aa12.81□□□□□ -0.36
PDXDC1-210ENST00000563679 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
PDXDC1-210ENST00000563679 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
PDXDC1-210ENST00000563679 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
PDXDC1-210ENST00000563679 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
PDXDC1-210ENST00000563679 C8orf34Q49A92 452 aa12.79□□□□□ -0.36
PDXDC1-210ENST00000563679 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 MAPK8IP3Q9UPT6 1336 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 IGHDP01880 384 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 MLECQ14165 292 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
PDXDC1-210ENST00000563679 SKAP1Q86WV1 359 aa12.77□□□□□ -0.36
PDXDC1-210ENST00000563679 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.36
PDXDC1-210ENST00000563679 ROBO2Q9HCK4 1378 aa12.77□□□□□ -0.37
PDXDC1-210ENST00000563679 RLBP1P12271 317 aa12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 ESF1Q9H501 851 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
PDXDC1-210ENST00000563679 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 FER1L4A9Z1Z3 1794 aa12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 IL13P35225 146 aa12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
PDXDC1-210ENST00000563679 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 OVOS2A0A0J9YW53 1432 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 OVOS2Q6IE36 1432 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 TXNDC2Q86VQ3 553 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 USP54Q70EL1 1684 aa12.74□□□□□ -0.37
PDXDC1-210ENST00000563679 RIPK4P57078 832 aa12.73□□□□□ -0.37
PDXDC1-210ENST00000563679 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
PDXDC1-210ENST00000563679 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
PDXDC1-210ENST00000563679 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
PDXDC1-210ENST00000563679 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
PDXDC1-210ENST00000563679 PLEKHG3A1L390 1219 aa12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 TSR2Q969E8 191 aaKnown RBP12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 NME9Q86XW9 330 aa12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
PDXDC1-210ENST00000563679 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-210ENST00000563679 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
PDXDC1-210ENST00000563679 PEAK1Q9H792 1746 aa12.71□□□□□ -0.37
PDXDC1-210ENST00000563679 PIK3R4Q99570 1358 aa12.71□□□□□ -0.38
PDXDC1-210ENST00000563679 USP6P35125 1406 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 LTKP29376 864 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 FMN2Q9NZ56 1722 aa12.7□□□□□ -0.38
PDXDC1-210ENST00000563679 COG3Q96JB2 828 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms