RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
CCDC187-201ENST00000563590 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
CCDC187-201ENST00000563590 PLXNC1O60486 1568 aa15.83■□□□□ 0.12
CCDC187-201ENST00000563590 AAMPQ13685 434 aa15.83■□□□□ 0.12
CCDC187-201ENST00000563590 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.82■□□□□ 0.12
CCDC187-201ENST00000563590 MAST1Q9Y2H9 1570 aa15.82■□□□□ 0.12
CCDC187-201ENST00000563590 UQCRHLA0A096LP55 91 aa15.82■□□□□ 0.12
CCDC187-201ENST00000563590 UQCRHP07919 91 aa15.82■□□□□ 0.12
CCDC187-201ENST00000563590 MVPQ14764 893 aaKnown RBP15.82■□□□□ 0.12
CCDC187-201ENST00000563590 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
CCDC187-201ENST00000563590 POLR3AO14802 1390 aaPredicted RBP15.82■□□□□ 0.12
CCDC187-201ENST00000563590 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
CCDC187-201ENST00000563590 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
CCDC187-201ENST00000563590 HMOX1P09601 288 aa15.81■□□□□ 0.12
CCDC187-201ENST00000563590 ZSCAN30Q86W11 494 aa15.81■□□□□ 0.12
CCDC187-201ENST00000563590 ZNF518AQ6AHZ1 1483 aa15.8■□□□□ 0.12
CCDC187-201ENST00000563590 SSFA2P28290 1259 aa15.8■□□□□ 0.12
CCDC187-201ENST00000563590 IDI1Q13907 227 aa15.8■□□□□ 0.12
CCDC187-201ENST00000563590 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
CCDC187-201ENST00000563590 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
CCDC187-201ENST00000563590 DZIP1LQ8IYY4 767 aaKnown RBP15.79■□□□□ 0.12
CCDC187-201ENST00000563590 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
CCDC187-201ENST00000563590 ZKSCAN2Q63HK3 967 aa15.79■□□□□ 0.12
CCDC187-201ENST00000563590 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
CCDC187-201ENST00000563590 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
CCDC187-201ENST00000563590 SKOR2Q2VWA4 1001 aaPredicted RBP15.78■□□□□ 0.12
CCDC187-201ENST00000563590 ANKRD45Q5TZF3 282 aa15.78■□□□□ 0.12
CCDC187-201ENST00000563590 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
CCDC187-201ENST00000563590 KDM5AP29375 1690 aaKnown RBP15.78■□□□□ 0.12
CCDC187-201ENST00000563590 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
CCDC187-201ENST00000563590 NOL8Q76FK4 1167 aaKnown RBP15.77■□□□□ 0.12
CCDC187-201ENST00000563590 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.12
CCDC187-201ENST00000563590 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
CCDC187-201ENST00000563590 THUMPD2Q9BTF0 503 aaKnown RBP15.77■□□□□ 0.11
CCDC187-201ENST00000563590 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
CCDC187-201ENST00000563590 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
CCDC187-201ENST00000563590 ABCC1P33527 1531 aa15.76■□□□□ 0.11
CCDC187-201ENST00000563590 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
CCDC187-201ENST00000563590 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
CCDC187-201ENST00000563590 C1orf115Q9H7X2 142 aa15.74■□□□□ 0.11
CCDC187-201ENST00000563590 CEP152O94986 1710 aa15.74■□□□□ 0.11
CCDC187-201ENST00000563590 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
CCDC187-201ENST00000563590 YEATS2Q9ULM3 1422 aa15.74■□□□□ 0.11
CCDC187-201ENST00000563590 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
CCDC187-201ENST00000563590 TRIM27P14373 513 aa15.73■□□□□ 0.11
CCDC187-201ENST00000563590 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
CCDC187-201ENST00000563590 IQSEC2Q5JU85 1478 aa15.73■□□□□ 0.11
CCDC187-201ENST00000563590 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
CCDC187-201ENST00000563590 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
CCDC187-201ENST00000563590 TRPM2O94759 1503 aa15.72■□□□□ 0.11
CCDC187-201ENST00000563590 DDIT3P35638 169 aa15.72■□□□□ 0.11
CCDC187-201ENST00000563590 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
CCDC187-201ENST00000563590 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
CCDC187-201ENST00000563590 NECTIN2Q92692 538 aa15.71■□□□□ 0.11
CCDC187-201ENST00000563590 TSPOAP1O95153 1857 aa15.71■□□□□ 0.11
CCDC187-201ENST00000563590 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
CCDC187-201ENST00000563590 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
CCDC187-201ENST00000563590 SSH1Q8WYL5 1049 aa15.71■□□□□ 0.1
CCDC187-201ENST00000563590 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 CCDC27Q2M243 656 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 CBX1P83916 185 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 TSC1Q92574 1164 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 DDX19BQ9UMR2 479 aa15.7■□□□□ 0.1
CCDC187-201ENST00000563590 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 OFD1O75665 1012 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 PTPRTO14522 1441 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 NCOA3Q9Y6Q9 1424 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
CCDC187-201ENST00000563590 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
CCDC187-201ENST00000563590 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
CCDC187-201ENST00000563590 RBM25P49756 843 aaKnown RBP15.68■□□□□ 0.1
CCDC187-201ENST00000563590 ATF7IPQ6VMQ6 1270 aa15.68■□□□□ 0.1
CCDC187-201ENST00000563590 LTV1Q96GA3 475 aaPredicted RBP15.68■□□□□ 0.1
CCDC187-201ENST00000563590 RIPK4P57078 832 aa15.68■□□□□ 0.1
CCDC187-201ENST00000563590 RAB3GAP1Q15042 981 aa15.68■□□□□ 0.1
CCDC187-201ENST00000563590 SNX21Q969T3 373 aa15.68■□□□□ 0.1
CCDC187-201ENST00000563590 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
CCDC187-201ENST00000563590 IGSF3O75054 1194 aa15.67■□□□□ 0.1
CCDC187-201ENST00000563590 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
CCDC187-201ENST00000563590 PTMSP20962 102 aa15.67■□□□□ 0.1
CCDC187-201ENST00000563590 CHAMP1Q96JM3 812 aa15.67■□□□□ 0.1
CCDC187-201ENST00000563590 SYCE3A1L190 88 aa15.67■□□□□ 0.1
CCDC187-201ENST00000563590 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
CCDC187-201ENST00000563590 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
CCDC187-201ENST00000563590 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
CCDC187-201ENST00000563590 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
CCDC187-201ENST00000563590 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
CCDC187-201ENST00000563590 PRAM1Q96QH2 718 aa15.66■□□□□ 0.1
CCDC187-201ENST00000563590 UGGT1Q9NYU2 1555 aa15.66■□□□□ 0.1
CCDC187-201ENST00000563590 BAG4O95429 457 aaKnown RBP15.65■□□□□ 0.1
CCDC187-201ENST00000563590 MAP7D2Q96T17 732 aa15.65■□□□□ 0.1
CCDC187-201ENST00000563590 NOS1P29475 1434 aa15.65■□□□□ 0.1
CCDC187-201ENST00000563590 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
CCDC187-201ENST00000563590 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
CCDC187-201ENST00000563590 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
CCDC187-201ENST00000563590 ZBTB40Q9NUA8 1239 aa15.64■□□□□ 0.09
CCDC187-201ENST00000563590 PRIM1P49642 420 aaKnown RBP15.64■□□□□ 0.09
CCDC187-201ENST00000563590 NUCB1Q02818 461 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms