RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
LINC01416-201ENST00000563553 TLL2Q9Y6L7 1015 aa6.93□□□□□ -1.3
LINC01416-201ENST00000563553 ALDH1A1P00352 501 aa6.92□□□□□ -1.3
LINC01416-201ENST00000563553 EHBP1Q8NDI1 1231 aa6.92□□□□□ -1.3
LINC01416-201ENST00000563553 ATP13A2Q9NQ11 1180 aa6.92□□□□□ -1.3
LINC01416-201ENST00000563553 RTL5Q5HYW3 569 aaPredicted RBP6.92□□□□□ -1.3
LINC01416-201ENST00000563553 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
LINC01416-201ENST00000563553 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
LINC01416-201ENST00000563553 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
LINC01416-201ENST00000563553 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.31
LINC01416-201ENST00000563553 CLK2P49760 499 aaKnown RBP6.89□□□□□ -1.31
LINC01416-201ENST00000563553 FOXJ1Q92949 421 aa6.89□□□□□ -1.31
LINC01416-201ENST00000563553 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
LINC01416-201ENST00000563553 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
LINC01416-201ENST00000563553 C11orf95C9JLR9 678 aaPredicted RBP6.87□□□□□ -1.31
LINC01416-201ENST00000563553 CTHP32929 405 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 TRIM46Q7Z4K8 759 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 TRIM47Q96LD4 638 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 BMP1P13497 986 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 MPNDQ8N594 471 aa6.87□□□□□ -1.31
LINC01416-201ENST00000563553 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
LINC01416-201ENST00000563553 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
LINC01416-201ENST00000563553 BCANQ96GW7 911 aa6.86□□□□□ -1.31
LINC01416-201ENST00000563553 SLC24A1O60721 1099 aa6.85□□□□□ -1.31
LINC01416-201ENST00000563553 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
LINC01416-201ENST00000563553 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
LINC01416-201ENST00000563553 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
LINC01416-201ENST00000563553 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
LINC01416-201ENST00000563553 PROCA1Q8NCQ7 364 aaPredicted RBP6.84□□□□□ -1.31
LINC01416-201ENST00000563553 CDK15Q96Q40 435 aa6.84□□□□□ -1.31
LINC01416-201ENST00000563553 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.31
LINC01416-201ENST00000563553 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.31
LINC01416-201ENST00000563553 NUTM2DQ5VT03 806 aaPredicted RBP6.84□□□□□ -1.31
LINC01416-201ENST00000563553 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.31
LINC01416-201ENST00000563553 TSC1Q92574 1164 aa6.84□□□□□ -1.31
LINC01416-201ENST00000563553 CTDSPL2Q05D32 466 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 NNTQ13423 1086 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 C1QTNF2Q9BXJ5 285 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 NR3C2P08235 984 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 TIMP2P16035 220 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 SH3D19Q5HYK7 790 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 WASF2Q9Y6W5 498 aa6.83□□□□□ -1.32
LINC01416-201ENST00000563553 CAPN5O15484 640 aaPredicted RBP6.82□□□□□ -1.32
LINC01416-201ENST00000563553 ADH1CP00326 375 aa6.82□□□□□ -1.32
LINC01416-201ENST00000563553 GRM5P41594 1212 aa6.82□□□□□ -1.32
LINC01416-201ENST00000563553 SH3BP5LQ7L8J4 393 aa6.82□□□□□ -1.32
LINC01416-201ENST00000563553 RSPH6AQ9H0K4 717 aa6.82□□□□□ -1.32
LINC01416-201ENST00000563553 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
LINC01416-201ENST00000563553 PPP2R2DQ66LE6 453 aa6.81□□□□□ -1.32
LINC01416-201ENST00000563553 LRRN4Q8WUT4 740 aa6.81□□□□□ -1.32
LINC01416-201ENST00000563553 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
LINC01416-201ENST00000563553 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
LINC01416-201ENST00000563553 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
LINC01416-201ENST00000563553 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
LINC01416-201ENST00000563553 BPHLQ86WA6 291 aaPredicted RBP6.78□□□□□ -1.32
LINC01416-201ENST00000563553 DDRGK1Q96HY6 314 aa6.78□□□□□ -1.32
LINC01416-201ENST00000563553 ZFAND3Q9H8U3 227 aa6.78□□□□□ -1.32
LINC01416-201ENST00000563553 ITPKCQ96DU7 683 aa6.78□□□□□ -1.32
LINC01416-201ENST00000563553 ZFP42Q96MM3 310 aa6.78□□□□□ -1.32
LINC01416-201ENST00000563553 WFS1O76024 890 aa6.77□□□□□ -1.33
LINC01416-201ENST00000563553 WDR4P57081 412 aaKnown RBP6.77□□□□□ -1.33
LINC01416-201ENST00000563553 TRMT44Q8IYL2 757 aaKnown RBP6.77□□□□□ -1.33
LINC01416-201ENST00000563553 EPS8L1Q8TE68 723 aa6.77□□□□□ -1.33
LINC01416-201ENST00000563553 KIFC2Q96AC6 838 aa6.77□□□□□ -1.33
LINC01416-201ENST00000563553 HMX1Q9NP08 348 aaPredicted RBP6.77□□□□□ -1.33
LINC01416-201ENST00000563553 TERTO14746 1132 aaKnown RBP6.77□□□□□ -1.33
LINC01416-201ENST00000563553 ARID5BQ14865 1188 aa6.76□□□□□ -1.33
LINC01416-201ENST00000563553 NR6A1Q15406 480 aa6.76□□□□□ -1.33
LINC01416-201ENST00000563553 ERFEQ4G0M1 354 aa6.76□□□□□ -1.33
LINC01416-201ENST00000563553 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
LINC01416-201ENST00000563553 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
LINC01416-201ENST00000563553 MAP4K5Q9Y4K4 846 aa6.76□□□□□ -1.33
LINC01416-201ENST00000563553 ZIC2O95409 532 aaPredicted RBP6.75□□□□□ -1.33
LINC01416-201ENST00000563553 NR5A1Q13285 461 aa6.75□□□□□ -1.33
LINC01416-201ENST00000563553 AGERQ15109 404 aa6.75□□□□□ -1.33
LINC01416-201ENST00000563553 ARMC2Q8NEN0 867 aa6.75□□□□□ -1.33
LINC01416-201ENST00000563553 MAGEB6P1A0A0J9YX57 407 aa6.74□□□□□ -1.33
LINC01416-201ENST00000563553 WIPF1O43516 503 aa6.74□□□□□ -1.33
LINC01416-201ENST00000563553 FSHRP23945 695 aa6.74□□□□□ -1.33
LINC01416-201ENST00000563553 FKBPLQ9UIM3 349 aa6.74□□□□□ -1.33
LINC01416-201ENST00000563553 PURBQ96QR8 312 aaKnown RBP6.73□□□□□ -1.33
LINC01416-201ENST00000563553 CARD14Q9BXL6 1004 aa6.73□□□□□ -1.33
LINC01416-201ENST00000563553 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
LINC01416-201ENST00000563553 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
LINC01416-201ENST00000563553 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
LINC01416-201ENST00000563553 USP17L8P0C7I0 530 aa6.72□□□□□ -1.33
LINC01416-201ENST00000563553 RFC5P40937 340 aa6.72□□□□□ -1.33
LINC01416-201ENST00000563553 MEIOBQ8N635 442 aa6.72□□□□□ -1.33
LINC01416-201ENST00000563553 AP1G2O75843 785 aa6.71□□□□□ -1.33
LINC01416-201ENST00000563553 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.33
LINC01416-201ENST00000563553 NXF1Q9UBU9 619 aaKnown RBP6.71□□□□□ -1.33
LINC01416-201ENST00000563553 VEGFBP49765 207 aa6.71□□□□□ -1.34
LINC01416-201ENST00000563553 GOPCQ9HD26 462 aa6.71□□□□□ -1.34
LINC01416-201ENST00000563553 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
LINC01416-201ENST00000563553 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
LINC01416-201ENST00000563553 BRPF1P55201 1214 aaPredicted RBP6.7□□□□□ -1.34
LINC01416-201ENST00000563553 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
LINC01416-201ENST00000563553 H3BM21 787 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms