RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SMPD1P17405 629 aa8.13□□□□□ -1.11
HMGB1P33-201ENST00000563485 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
HMGB1P33-201ENST00000563485 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
HMGB1P33-201ENST00000563485 BAP1Q92560 729 aa8.13□□□□□ -1.11
HMGB1P33-201ENST00000563485 J3QL48 77 aa8.12□□□□□ -1.11
HMGB1P33-201ENST00000563485 NEUROD2Q15784 382 aa8.12□□□□□ -1.11
HMGB1P33-201ENST00000563485 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P33-201ENST00000563485 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P33-201ENST00000563485 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
HMGB1P33-201ENST00000563485 AVPP01185 164 aa8.11□□□□□ -1.11
HMGB1P33-201ENST00000563485 ZNF511Q8NB15 262 aa8.11□□□□□ -1.11
HMGB1P33-201ENST00000563485 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
HMGB1P33-201ENST00000563485 HELBQ8NG08 1087 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P33-201ENST00000563485 SIAH2O43255 324 aa8.09□□□□□ -1.11
HMGB1P33-201ENST00000563485 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGB1P33-201ENST00000563485 ATP1B4Q9UN42 357 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P33-201ENST00000563485 ALDH1A1P00352 501 aa8.08□□□□□ -1.12
HMGB1P33-201ENST00000563485 ZNF787Q6DD87 383 aa8.08□□□□□ -1.12
HMGB1P33-201ENST00000563485 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
HMGB1P33-201ENST00000563485 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
HMGB1P33-201ENST00000563485 POTECB2RU33 542 aa8.07□□□□□ -1.12
HMGB1P33-201ENST00000563485 BRPF1P55201 1214 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P33-201ENST00000563485 CTDSPL2Q05D32 466 aa8.07□□□□□ -1.12
HMGB1P33-201ENST00000563485 HPS1Q92902 700 aa8.07□□□□□ -1.12
HMGB1P33-201ENST00000563485 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
HMGB1P33-201ENST00000563485 AXIN1O15169 862 aa8.06□□□□□ -1.12
HMGB1P33-201ENST00000563485 PPP2R2DQ66LE6 453 aa8.06□□□□□ -1.12
HMGB1P33-201ENST00000563485 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
HMGB1P33-201ENST00000563485 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P33-201ENST00000563485 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
HMGB1P33-201ENST00000563485 IL27Q8NEV9 243 aa8.05□□□□□ -1.12
HMGB1P33-201ENST00000563485 VARSP26640 1264 aaKnown RBP8.04□□□□□ -1.12
HMGB1P33-201ENST00000563485 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
HMGB1P33-201ENST00000563485 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
HMGB1P33-201ENST00000563485 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
HMGB1P33-201ENST00000563485 AP1G2O75843 785 aa8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 AGERQ15109 404 aa8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 FAM174AQ8TBP5 190 aa8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 GMPR2Q9P2T1 348 aaKnown RBP8.01□□□□□ -1.13
HMGB1P33-201ENST00000563485 NBPF14Q5TI25 921 aa8□□□□□ -1.13
HMGB1P33-201ENST00000563485 BPHLQ86WA6 291 aaPredicted RBP8□□□□□ -1.13
HMGB1P33-201ENST00000563485 PCMTD1Q96MG8 357 aaPredicted RBP8□□□□□ -1.13
HMGB1P33-201ENST00000563485 RFC5P40937 340 aa7.99□□□□□ -1.13
HMGB1P33-201ENST00000563485 NR6A1Q15406 480 aa7.99□□□□□ -1.13
HMGB1P33-201ENST00000563485 MPNDQ8N594 471 aa7.99□□□□□ -1.13
HMGB1P33-201ENST00000563485 ATP13A2Q9NQ11 1180 aa7.99□□□□□ -1.13
HMGB1P33-201ENST00000563485 USP17L8P0C7I0 530 aa7.98□□□□□ -1.13
HMGB1P33-201ENST00000563485 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
HMGB1P33-201ENST00000563485 SH3BP5LQ7L8J4 393 aa7.98□□□□□ -1.13
HMGB1P33-201ENST00000563485 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
HMGB1P33-201ENST00000563485 ADH1CP00326 375 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 NNTQ13423 1086 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 CDK15Q96Q40 435 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 FKBPLQ9UIM3 349 aa7.97□□□□□ -1.13
HMGB1P33-201ENST00000563485 MAGEB6P1A0A0J9YX57 407 aa7.96□□□□□ -1.14
HMGB1P33-201ENST00000563485 PRKCSHP14314 528 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P33-201ENST00000563485 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.14
HMGB1P33-201ENST00000563485 ZNF775Q96BV0 537 aaPredicted RBP7.96□□□□□ -1.14
HMGB1P33-201ENST00000563485 CARD14Q9BXL6 1004 aa7.96□□□□□ -1.14
HMGB1P33-201ENST00000563485 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P33-201ENST00000563485 C11orf95C9JLR9 678 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P33-201ENST00000563485 BMP1P13497 986 aa7.94□□□□□ -1.14
HMGB1P33-201ENST00000563485 NR3C2P08235 984 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 TIMP2P16035 220 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 GRM5P41594 1212 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 TRMT44Q8IYL2 757 aaKnown RBP7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 ARHGAP9Q9BRR9 750 aa7.93□□□□□ -1.14
HMGB1P33-201ENST00000563485 SNRPBP14678 240 aaKnown RBP7.92□□□□□ -1.14
HMGB1P33-201ENST00000563485 WDR4P57081 412 aaKnown RBP7.92□□□□□ -1.14
HMGB1P33-201ENST00000563485 ZC3H4Q9UPT8 1303 aaKnown RBP7.92□□□□□ -1.14
HMGB1P33-201ENST00000563485 FSHRP23945 695 aa7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 NR5A1Q13285 461 aa7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 TMEM259Q4ZIN3 620 aa7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 VASH1Q7L8A9 365 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 KLF16Q9BXK1 252 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P33-201ENST00000563485 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
HMGB1P33-201ENST00000563485 TRIM34Q9BYJ4 488 aa7.9□□□□□ -1.14
HMGB1P33-201ENST00000563485 SENP2Q9HC62 589 aa7.9□□□□□ -1.14
HMGB1P33-201ENST00000563485 MAP4K5Q9Y4K4 846 aa7.9□□□□□ -1.14
HMGB1P33-201ENST00000563485 ZIC2O95409 532 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P33-201ENST00000563485 ZBTB33Q86T24 672 aa7.89□□□□□ -1.15
HMGB1P33-201ENST00000563485 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
HMGB1P33-201ENST00000563485 PTK2Q05397 1052 aa7.88□□□□□ -1.15
HMGB1P33-201ENST00000563485 KIFC2Q96AC6 838 aa7.88□□□□□ -1.15
HMGB1P33-201ENST00000563485 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
HMGB1P33-201ENST00000563485 PNMA1Q8ND90 353 aa7.87□□□□□ -1.15
HMGB1P33-201ENST00000563485 ADAM32Q8TC27 787 aa7.87□□□□□ -1.15
HMGB1P33-201ENST00000563485 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P33-201ENST00000563485 GPSM3Q9Y4H4 160 aa7.87□□□□□ -1.15
HMGB1P33-201ENST00000563485 MRPL14Q6P1L8 145 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms