RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
SNX29-202ENST00000563308 KIF1BO60333 1816 aa15.12■□□□□ 0.01
SNX29-202ENST00000563308 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
SNX29-202ENST00000563308 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
SNX29-202ENST00000563308 APLP1P51693 650 aa15.1■□□□□ 0.01
SNX29-202ENST00000563308 ARXQ96QS3 562 aa15.1■□□□□ 0.01
SNX29-202ENST00000563308 MPHOSPH9Q99550 1183 aa15.1■□□□□ 0.01
SNX29-202ENST00000563308 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
SNX29-202ENST00000563308 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
SNX29-202ENST00000563308 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
SNX29-202ENST00000563308 ARHGEF10O15013 1369 aa15.09■□□□□ 0.01
SNX29-202ENST00000563308 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
SNX29-202ENST00000563308 KLHL34Q8N239 644 aa15.08■□□□□ 0
SNX29-202ENST00000563308 MTFR1LQ9H019 292 aa15.08■□□□□ 0
SNX29-202ENST00000563308 NRAPQ86VF7 1730 aa15.08■□□□□ 0
SNX29-202ENST00000563308 SHANK3Q9BYB0 1731 aa15.08■□□□□ 0
SNX29-202ENST00000563308 CASZ1Q86V15 1759 aa15.08■□□□□ 0
SNX29-202ENST00000563308 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0
SNX29-202ENST00000563308 STK32BQ9NY57 414 aa15.07■□□□□ 0
SNX29-202ENST00000563308 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
SNX29-202ENST00000563308 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
SNX29-202ENST00000563308 PPLO60437 1756 aa15.06■□□□□ 0
SNX29-202ENST00000563308 GRIN3BO60391 1043 aa15.05■□□□□ -0
SNX29-202ENST00000563308 PDGFDQ9GZP0 370 aaPredicted RBP15.05■□□□□ -0
SNX29-202ENST00000563308 ADGRF5Q8IZF2 1346 aa15.05■□□□□ -0
SNX29-202ENST00000563308 KIF1AQ12756 1690 aa15.05■□□□□ -0
SNX29-202ENST00000563308 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
SNX29-202ENST00000563308 ATP10DQ9P241 1426 aa15.04■□□□□ -0
SNX29-202ENST00000563308 ANO8Q9HCE9 1232 aaPredicted RBP15.04■□□□□ -0
SNX29-202ENST00000563308 MAP3K5Q99683 1374 aa15.03■□□□□ -0
SNX29-202ENST00000563308 SPATA31A1Q5TZJ5 1347 aa15.02■□□□□ -0
SNX29-202ENST00000563308 PLSCR1O15162 318 aa15.02■□□□□ -0
SNX29-202ENST00000563308 RGL3Q3MIN7 710 aa15.02■□□□□ -0
SNX29-202ENST00000563308 ZNF526Q8TF50 670 aaPredicted RBP15.02■□□□□ -0
SNX29-202ENST00000563308 USP35Q9P2H5 1018 aa15.02■□□□□ -0
SNX29-202ENST00000563308 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
SNX29-202ENST00000563308 STRN4Q9NRL3 753 aa15.01□□□□□ -0.01
SNX29-202ENST00000563308 ABCA3Q99758 1704 aa15□□□□□ -0.01
SNX29-202ENST00000563308 SBNO1A3KN83 1393 aa15□□□□□ -0.01
SNX29-202ENST00000563308 PRDM11Q9NQV5 511 aa15□□□□□ -0.01
SNX29-202ENST00000563308 WWC3Q9ULE0 1092 aa15□□□□□ -0.01
SNX29-202ENST00000563308 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
SNX29-202ENST00000563308 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
SNX29-202ENST00000563308 ACIN1Q9UKV3 1341 aaKnown RBP14.99□□□□□ -0.01
SNX29-202ENST00000563308 PHF8Q9UPP1 1060 aa14.99□□□□□ -0.01
SNX29-202ENST00000563308 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
SNX29-202ENST00000563308 EVA1CP58658 441 aa14.98□□□□□ -0.01
SNX29-202ENST00000563308 SLC15A2Q16348 729 aa14.97□□□□□ -0.01
SNX29-202ENST00000563308 TECPR2O15040 1411 aa14.97□□□□□ -0.01
SNX29-202ENST00000563308 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
SNX29-202ENST00000563308 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.01
SNX29-202ENST00000563308 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.01
SNX29-202ENST00000563308 DNAJC5GQ8N7S2 189 aa14.96□□□□□ -0.01
SNX29-202ENST00000563308 POLD1P28340 1107 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 TMEM132EQ6IEE7 984 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
SNX29-202ENST00000563308 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
SNX29-202ENST00000563308 STK26Q9P289 416 aa14.94□□□□□ -0.02
SNX29-202ENST00000563308 C14orf93Q9H972 538 aaKnown RBP14.93□□□□□ -0.02
SNX29-202ENST00000563308 PLEKHH1Q9ULM0 1364 aa14.93□□□□□ -0.02
SNX29-202ENST00000563308 YTHDC2Q9H6S0 1430 aaKnown RBP14.91□□□□□ -0.02
SNX29-202ENST00000563308 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 TCP11L2Q8N4U5 519 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 KLRG1Q96E93 195 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 OVOS2A0A0G2JMS6 1433 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 OVOS2A0A0J9YW53 1432 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 OVOS2Q6IE36 1432 aa14.9□□□□□ -0.02
SNX29-202ENST00000563308 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
SNX29-202ENST00000563308 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
SNX29-202ENST00000563308 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
SNX29-202ENST00000563308 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
SNX29-202ENST00000563308 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
SNX29-202ENST00000563308 JMYQ8N9B5 988 aa14.87□□□□□ -0.03
SNX29-202ENST00000563308 THRAP3Q9Y2W1 955 aaKnown RBP14.87□□□□□ -0.03
SNX29-202ENST00000563308 GPRASP1Q5JY77 1395 aa14.86□□□□□ -0.03
SNX29-202ENST00000563308 CHRNA2Q15822 529 aa14.86□□□□□ -0.03
SNX29-202ENST00000563308 TOMM70O94826 608 aa14.85□□□□□ -0.03
SNX29-202ENST00000563308 PROM2Q8N271 834 aa14.85□□□□□ -0.03
SNX29-202ENST00000563308 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
SNX29-202ENST00000563308 YBX3P16989 372 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNX29-202ENST00000563308 PMFBP1Q8TBY8 1022 aa14.84□□□□□ -0.03
SNX29-202ENST00000563308 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
SNX29-202ENST00000563308 KIF3CO14782 793 aa14.83□□□□□ -0.04
SNX29-202ENST00000563308 NLGN2Q8NFZ4 835 aa14.83□□□□□ -0.04
SNX29-202ENST00000563308 KIAA0232Q92628 1395 aa14.83□□□□□ -0.04
SNX29-202ENST00000563308 SLC16A10Q8TF71 515 aa14.82□□□□□ -0.04
SNX29-202ENST00000563308 RGPD8O14715 1765 aaPredicted RBP14.81□□□□□ -0.04
SNX29-202ENST00000563308 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
SNX29-202ENST00000563308 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
SNX29-202ENST00000563308 WDR90Q96KV7 1748 aa14.8□□□□□ -0.04
SNX29-202ENST00000563308 ZC3H6P61129 1189 aaKnown RBP14.8□□□□□ -0.04
SNX29-202ENST00000563308 DDB1Q16531 1140 aa14.8□□□□□ -0.04
SNX29-202ENST00000563308 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
SNX29-202ENST00000563308 ADCY9O60503 1353 aa14.79□□□□□ -0.04
SNX29-202ENST00000563308 SAFB2Q14151 953 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNX29-202ENST00000563308 LARP1Q6PKG0 1096 aaKnown RBP14.79□□□□□ -0.04
SNX29-202ENST00000563308 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms