RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CTHP32929 405 aa7.16□□□□□ -1.26
SHCBP1-202ENST00000563219 ZNF511Q8NB15 262 aa7.16□□□□□ -1.26
SHCBP1-202ENST00000563219 RSPH6AQ9H0K4 717 aa7.16□□□□□ -1.26
SHCBP1-202ENST00000563219 NUTM2BA6NNL0 878 aaPredicted RBP7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 NUTM2EB1AL46 878 aaPredicted RBP7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 QPCTQ16769 361 aa7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 NUTM2DQ5VT03 806 aaPredicted RBP7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 NUTM2AQ8IVF1 878 aaPredicted RBP7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 ATP13A2Q9NQ11 1180 aa7.15□□□□□ -1.26
SHCBP1-202ENST00000563219 PER1O15534 1290 aaPredicted RBP7.14□□□□□ -1.27
SHCBP1-202ENST00000563219 F12P00748 615 aaPredicted RBP7.14□□□□□ -1.27
SHCBP1-202ENST00000563219 VARSP26640 1264 aaKnown RBP7.14□□□□□ -1.27
SHCBP1-202ENST00000563219 MPNDQ8N594 471 aa7.13□□□□□ -1.27
SHCBP1-202ENST00000563219 MAP10Q9P2G4 905 aa7.13□□□□□ -1.27
SHCBP1-202ENST00000563219 WASF2Q9Y6W5 498 aa7.13□□□□□ -1.27
SHCBP1-202ENST00000563219 CLK2P49760 499 aaKnown RBP7.12□□□□□ -1.27
SHCBP1-202ENST00000563219 RTL5Q5HYW3 569 aaPredicted RBP7.12□□□□□ -1.27
SHCBP1-202ENST00000563219 POLR3EQ9NVU0 708 aa7.12□□□□□ -1.27
SHCBP1-202ENST00000563219 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
SHCBP1-202ENST00000563219 NEUROD2Q15784 382 aa7.11□□□□□ -1.27
SHCBP1-202ENST00000563219 TSC1Q92574 1164 aa7.11□□□□□ -1.27
SHCBP1-202ENST00000563219 SENP2Q9HC62 589 aa7.11□□□□□ -1.27
SHCBP1-202ENST00000563219 TRIM47Q96LD4 638 aa7.1□□□□□ -1.27
SHCBP1-202ENST00000563219 CAPN5O15484 640 aaPredicted RBP7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 SNRPBP14678 240 aaKnown RBP7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 TREML4Q6UXN2 200 aa7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 KDM4CQ9H3R0 1056 aa7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 GPBP1L1Q9HC44 474 aaPredicted RBP7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
SHCBP1-202ENST00000563219 SKIV2LQ15477 1246 aaKnown RBP7.08□□□□□ -1.28
SHCBP1-202ENST00000563219 LCE2AQ5TA79 106 aaPredicted RBP7.08□□□□□ -1.28
SHCBP1-202ENST00000563219 ARMC2Q8NEN0 867 aa7.08□□□□□ -1.28
SHCBP1-202ENST00000563219 KIFC2Q96AC6 838 aa7.08□□□□□ -1.28
SHCBP1-202ENST00000563219 CDK15Q96Q40 435 aa7.08□□□□□ -1.28
SHCBP1-202ENST00000563219 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
SHCBP1-202ENST00000563219 BPHLQ86WA6 291 aaPredicted RBP7.07□□□□□ -1.28
SHCBP1-202ENST00000563219 DDRGK1Q96HY6 314 aa7.07□□□□□ -1.28
SHCBP1-202ENST00000563219 FAM117AQ9C073 453 aa7.07□□□□□ -1.28
SHCBP1-202ENST00000563219 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
SHCBP1-202ENST00000563219 NNTQ13423 1086 aa7.06□□□□□ -1.28
SHCBP1-202ENST00000563219 AGERQ15109 404 aa7.06□□□□□ -1.28
SHCBP1-202ENST00000563219 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
SHCBP1-202ENST00000563219 ADH1CP00326 375 aa7.05□□□□□ -1.28
SHCBP1-202ENST00000563219 TMEM132AQ24JP5 1023 aa7.05□□□□□ -1.28
SHCBP1-202ENST00000563219 TRIM46Q7Z4K8 759 aa7.05□□□□□ -1.28
SHCBP1-202ENST00000563219 PROCA1Q8NCQ7 364 aaPredicted RBP7.05□□□□□ -1.28
SHCBP1-202ENST00000563219 ARID5BQ14865 1188 aa7.04□□□□□ -1.28
SHCBP1-202ENST00000563219 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
SHCBP1-202ENST00000563219 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.04□□□□□ -1.28
SHCBP1-202ENST00000563219 KLF16Q9BXK1 252 aaPredicted RBP7.04□□□□□ -1.28
SHCBP1-202ENST00000563219 WFS1O76024 890 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 BMP1P13497 986 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 GRM5P41594 1212 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 NFX1Q12986 1120 aaKnown RBP7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 NR5A1Q13285 461 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 NBPF14Q5TI25 921 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 PPP2R2DQ66LE6 453 aa7.03□□□□□ -1.28
SHCBP1-202ENST00000563219 TERTO14746 1132 aaKnown RBP7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 TIMP2P16035 220 aa7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 WDR4P57081 412 aaKnown RBP7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 SH3BP5LQ7L8J4 393 aa7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 C1QTNF2Q9BXJ5 285 aa7.02□□□□□ -1.29
SHCBP1-202ENST00000563219 LRRN4Q8WUT4 740 aa7.01□□□□□ -1.29
SHCBP1-202ENST00000563219 ZFP42Q96MM3 310 aa7.01□□□□□ -1.29
SHCBP1-202ENST00000563219 ATP1B4Q9UN42 357 aaPredicted RBP7.01□□□□□ -1.29
SHCBP1-202ENST00000563219 NR3C2P08235 984 aa7□□□□□ -1.29
SHCBP1-202ENST00000563219 TRMT44Q8IYL2 757 aaKnown RBP7□□□□□ -1.29
SHCBP1-202ENST00000563219 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
SHCBP1-202ENST00000563219 PDXDC2PQ6P474 469 aa6.99□□□□□ -1.29
SHCBP1-202ENST00000563219 MAP4K5Q9Y4K4 846 aa6.99□□□□□ -1.29
SHCBP1-202ENST00000563219 MAGEB6P1A0A0J9YX57 407 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 ZIC2O95409 532 aaPredicted RBP6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 SCARF1Q14162 830 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 NR6A1Q15406 480 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 ITPKCQ96DU7 683 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 FKBPLQ9UIM3 349 aa6.98□□□□□ -1.29
SHCBP1-202ENST00000563219 AP1G2O75843 785 aa6.97□□□□□ -1.29
SHCBP1-202ENST00000563219 VASH1Q7L8A9 365 aaPredicted RBP6.97□□□□□ -1.29
SHCBP1-202ENST00000563219 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
SHCBP1-202ENST00000563219 GOPCQ9HD26 462 aa6.97□□□□□ -1.29
SHCBP1-202ENST00000563219 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
SHCBP1-202ENST00000563219 WIPF1O43516 503 aa6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 ERFEQ4G0M1 354 aa6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 PURBQ96QR8 312 aaKnown RBP6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 CARD14Q9BXL6 1004 aa6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.3
SHCBP1-202ENST00000563219 FSHRP23945 695 aa6.95□□□□□ -1.3
SHCBP1-202ENST00000563219 NPAS3Q8IXF0 933 aa6.95□□□□□ -1.3
SHCBP1-202ENST00000563219 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
SHCBP1-202ENST00000563219 RFC5P40937 340 aa6.94□□□□□ -1.3
SHCBP1-202ENST00000563219 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms