RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
LINC00557-201ENST00000563184 S1PR4O95977 384 aa11.11□□□□□ -0.63
LINC00557-201ENST00000563184 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.11□□□□□ -0.63
LINC00557-201ENST00000563184 POM121CA8CG34 1229 aa11.1□□□□□ -0.63
LINC00557-201ENST00000563184 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
LINC00557-201ENST00000563184 CTHP32929 405 aa11.09□□□□□ -0.63
LINC00557-201ENST00000563184 FKBPLQ9UIM3 349 aa11.08□□□□□ -0.64
LINC00557-201ENST00000563184 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
LINC00557-201ENST00000563184 WWC1Q8IX03 1113 aa11.06□□□□□ -0.64
LINC00557-201ENST00000563184 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
LINC00557-201ENST00000563184 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
LINC00557-201ENST00000563184 FCF1Q9Y324 198 aaKnown RBP11.05□□□□□ -0.64
LINC00557-201ENST00000563184 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
LINC00557-201ENST00000563184 PPEF1O14829 653 aaPredicted RBP11.04□□□□□ -0.64
LINC00557-201ENST00000563184 WASHC4Q2M389 1173 aa11.04□□□□□ -0.64
LINC00557-201ENST00000563184 IRX2Q9BZI1 471 aaPredicted RBP11.04□□□□□ -0.64
LINC00557-201ENST00000563184 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
LINC00557-201ENST00000563184 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
LINC00557-201ENST00000563184 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
LINC00557-201ENST00000563184 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
LINC00557-201ENST00000563184 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
LINC00557-201ENST00000563184 FBXO45P0C2W1 286 aa11.02□□□□□ -0.65
LINC00557-201ENST00000563184 GLMNQ92990 594 aa11.01□□□□□ -0.65
LINC00557-201ENST00000563184 PRKD2Q9BZL6 878 aa11.01□□□□□ -0.65
LINC00557-201ENST00000563184 RNF223E7ERA6 249 aa11□□□□□ -0.65
LINC00557-201ENST00000563184 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
LINC00557-201ENST00000563184 ARID3AQ99856 593 aa11□□□□□ -0.65
LINC00557-201ENST00000563184 OCSTAMPQ9BR26 566 aa11□□□□□ -0.65
LINC00557-201ENST00000563184 NR1H3Q13133 447 aa10.99□□□□□ -0.65
LINC00557-201ENST00000563184 ARMC2Q8NEN0 867 aa10.99□□□□□ -0.65
LINC00557-201ENST00000563184 ZBBXA8MT70 800 aa10.98□□□□□ -0.65
LINC00557-201ENST00000563184 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
LINC00557-201ENST00000563184 PDXDC2PQ6P474 469 aa10.98□□□□□ -0.65
LINC00557-201ENST00000563184 GPKOWQ92917 476 aaPredicted RBP eCLIP10.98□□□□□ -0.65
LINC00557-201ENST00000563184 ALG2Q9H553 416 aa10.98□□□□□ -0.65
LINC00557-201ENST00000563184 HDGFL1Q5TGJ6 251 aa10.97□□□□□ -0.65
LINC00557-201ENST00000563184 NBPF14Q5TI25 921 aa10.97□□□□□ -0.65
LINC00557-201ENST00000563184 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
LINC00557-201ENST00000563184 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
LINC00557-201ENST00000563184 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
LINC00557-201ENST00000563184 BAP1Q92560 729 aa10.95□□□□□ -0.66
LINC00557-201ENST00000563184 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
LINC00557-201ENST00000563184 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
LINC00557-201ENST00000563184 SOX11P35716 441 aa10.93□□□□□ -0.66
LINC00557-201ENST00000563184 CCDC97Q96F63 343 aaPredicted RBP10.93□□□□□ -0.66
LINC00557-201ENST00000563184 SERPINA10Q9UK55 444 aa10.93□□□□□ -0.66
LINC00557-201ENST00000563184 PTK2Q05397 1052 aa10.92□□□□□ -0.66
LINC00557-201ENST00000563184 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
LINC00557-201ENST00000563184 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
LINC00557-201ENST00000563184 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
LINC00557-201ENST00000563184 FOXJ1Q92949 421 aa10.91□□□□□ -0.66
LINC00557-201ENST00000563184 SLC19A1P41440 591 aa10.9□□□□□ -0.66
LINC00557-201ENST00000563184 EIF4G2P78344 907 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00557-201ENST00000563184 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
LINC00557-201ENST00000563184 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
LINC00557-201ENST00000563184 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
LINC00557-201ENST00000563184 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
LINC00557-201ENST00000563184 SH3BP2P78314 561 aa10.89□□□□□ -0.67
LINC00557-201ENST00000563184 TRIM32Q13049 653 aa10.88□□□□□ -0.67
LINC00557-201ENST00000563184 SEMA3FQ13275 785 aa10.88□□□□□ -0.67
LINC00557-201ENST00000563184 SKOR1P84550 965 aa10.87□□□□□ -0.67
LINC00557-201ENST00000563184 SPRYD7Q5W111 196 aa10.87□□□□□ -0.67
LINC00557-201ENST00000563184 ARXQ96QS3 562 aa10.87□□□□□ -0.67
LINC00557-201ENST00000563184 ZBTB24O43167 697 aaPredicted RBP10.86□□□□□ -0.67
LINC00557-201ENST00000563184 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
LINC00557-201ENST00000563184 BPHLQ86WA6 291 aaPredicted RBP10.86□□□□□ -0.67
LINC00557-201ENST00000563184 C1QTNF2Q9BXJ5 285 aa10.86□□□□□ -0.67
LINC00557-201ENST00000563184 CARD14Q9BXL6 1004 aa10.86□□□□□ -0.67
LINC00557-201ENST00000563184 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
LINC00557-201ENST00000563184 MAGEB6P1A0A0J9YX57 407 aa10.85□□□□□ -0.67
LINC00557-201ENST00000563184 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
LINC00557-201ENST00000563184 GFRA3O60609 400 aa10.85□□□□□ -0.67
LINC00557-201ENST00000563184 RPIAP49247 311 aa10.85□□□□□ -0.67
LINC00557-201ENST00000563184 ERFEQ4G0M1 354 aa10.85□□□□□ -0.67
LINC00557-201ENST00000563184 ZBTB33Q86T24 672 aa10.85□□□□□ -0.67
LINC00557-201ENST00000563184 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
LINC00557-201ENST00000563184 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
LINC00557-201ENST00000563184 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
LINC00557-201ENST00000563184 AGERQ15109 404 aa10.83□□□□□ -0.68
LINC00557-201ENST00000563184 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
LINC00557-201ENST00000563184 PALM3A6NDB9 673 aaPredicted RBP10.82□□□□□ -0.68
LINC00557-201ENST00000563184 WNT7BP56706 349 aa10.82□□□□□ -0.68
LINC00557-201ENST00000563184 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
LINC00557-201ENST00000563184 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
LINC00557-201ENST00000563184 FAM174AQ8TBP5 190 aa10.81□□□□□ -0.68
LINC00557-201ENST00000563184 TFIP11Q9UBB9 837 aaKnown RBP10.81□□□□□ -0.68
LINC00557-201ENST00000563184 PDZRN3Q9UPQ7 1066 aa10.81□□□□□ -0.68
LINC00557-201ENST00000563184 MCCD1P59942 119 aaPredicted RBP10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PRR20EP86478 221 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PRR20CP86479 221 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PRR20DP86480 221 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PRR20BP86481 221 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PRR20AP86496 221 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 Q6ZNB5 142 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
LINC00557-201ENST00000563184 PHTF2Q8N3S3 785 aa10.8□□□□□ -0.68
LINC00557-201ENST00000563184 ZNF697Q5TEC3 545 aa10.79□□□□□ -0.68
LINC00557-201ENST00000563184 HOMEZQ8IX15 550 aa10.79□□□□□ -0.68
LINC00557-201ENST00000563184 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
LINC00557-201ENST00000563184 TRIM67Q6ZTA4 783 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms