RNA–Protein interactions for RNA: ENST00000563127.1

KATNB1-204, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-204ENST00000563127 MARF1Q9Y4F3 1742 aaKnown RBP27.47■■□□□ 1.99
KATNB1-204ENST00000563127 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
KATNB1-204ENST00000563127 ST20-MTHFSA0A0A6YYL1 179 aa27.46■■□□□ 1.99
KATNB1-204ENST00000563127 RXRBP28702 533 aa27.45■■□□□ 1.98
KATNB1-204ENST00000563127 NUTM2GQ5VZR2 741 aa27.42■■□□□ 1.98
KATNB1-204ENST00000563127 ATAD2Q6PL18 1390 aa27.4■■□□□ 1.98
KATNB1-204ENST00000563127 ABTB2Q8N961 1025 aa27.4■■□□□ 1.98
KATNB1-204ENST00000563127 TESK2Q96S53 571 aa27.4■■□□□ 1.98
KATNB1-204ENST00000563127 RBM6P78332 1123 aaKnown RBP27.38■■□□□ 1.97
KATNB1-204ENST00000563127 ZNF692Q9BU19 519 aaPredicted RBP27.38■■□□□ 1.97
KATNB1-204ENST00000563127 TRPC5Q9UL62 973 aaPredicted RBP27.38■■□□□ 1.97
KATNB1-204ENST00000563127 ABCA3Q99758 1704 aa27.38■■□□□ 1.97
KATNB1-204ENST00000563127 FAM83GA6ND36 823 aa27.37■■□□□ 1.97
KATNB1-204ENST00000563127 USP47Q96K76 1375 aa27.36■■□□□ 1.97
KATNB1-204ENST00000563127 SLC24A1O60721 1099 aa27.36■■□□□ 1.97
KATNB1-204ENST00000563127 BCL9LQ86UU0 1499 aa27.36■■□□□ 1.97
KATNB1-204ENST00000563127 USP6P35125 1406 aa27.35■■□□□ 1.97
KATNB1-204ENST00000563127 TMC1Q8TDI8 760 aa27.35■■□□□ 1.97
KATNB1-204ENST00000563127 BRD4O60885 1362 aaPredicted RBP27.35■■□□□ 1.97
KATNB1-204ENST00000563127 UNC5CLQ8IV45 518 aa27.34■■□□□ 1.97
KATNB1-204ENST00000563127 NLRP13Q86W25 1043 aa27.33■■□□□ 1.97
KATNB1-204ENST00000563127 PUS7Q96PZ0 661 aaKnown RBP27.33■■□□□ 1.97
KATNB1-204ENST00000563127 SLIT2O94813 1529 aa27.32■■□□□ 1.96
KATNB1-204ENST00000563127 SLC12A5Q9H2X9 1139 aa27.32■■□□□ 1.96
KATNB1-204ENST00000563127 ATRNO75882 1429 aa27.31■■□□□ 1.96
KATNB1-204ENST00000563127 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
KATNB1-204ENST00000563127 NLRP6P59044 892 aa27.29■■□□□ 1.96
KATNB1-204ENST00000563127 ZC3H6P61129 1189 aaKnown RBP27.29■■□□□ 1.96
KATNB1-204ENST00000563127 CPSF1Q10570 1443 aaKnown RBP27.29■■□□□ 1.96
KATNB1-204ENST00000563127 AKAP12Q02952 1782 aa27.28■■□□□ 1.96
KATNB1-204ENST00000563127 SSH2Q76I76 1423 aa27.28■■□□□ 1.96
KATNB1-204ENST00000563127 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
KATNB1-204ENST00000563127 TTC21BQ7Z4L5 1316 aa27.28■■□□□ 1.96
KATNB1-204ENST00000563127 TMF1P82094 1093 aa27.28■■□□□ 1.96
KATNB1-204ENST00000563127 PRDM11Q9NQV5 511 aa27.28■■□□□ 1.96
KATNB1-204ENST00000563127 GJD4Q96KN9 370 aaPredicted RBP27.27■■□□□ 1.96
KATNB1-204ENST00000563127 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
KATNB1-204ENST00000563127 BTG4Q9NY30 223 aa27.26■■□□□ 1.95
KATNB1-204ENST00000563127 USP19O94966 1318 aa27.25■■□□□ 1.95
KATNB1-204ENST00000563127 PLCH1Q4KWH8 1693 aa27.25■■□□□ 1.95
KATNB1-204ENST00000563127 HDGFL2Q7Z4V5 671 aaPredicted RBP27.25■■□□□ 1.95
KATNB1-204ENST00000563127 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.24■■□□□ 1.95
KATNB1-204ENST00000563127 KIAA0232Q92628 1395 aa27.24■■□□□ 1.95
KATNB1-204ENST00000563127 GCP02774 474 aa27.24■■□□□ 1.95
KATNB1-204ENST00000563127 CHRNA2Q15822 529 aa27.24■■□□□ 1.95
KATNB1-204ENST00000563127 TERF2IPQ9NYB0 399 aa27.24■■□□□ 1.95
KATNB1-204ENST00000563127 NWD2Q9ULI1 1742 aa27.24■■□□□ 1.95
KATNB1-204ENST00000563127 PHRF1Q9P1Y6 1649 aaKnown RBP27.23■■□□□ 1.95
KATNB1-204ENST00000563127 CCDC9Q9Y3X0 531 aaKnown RBP27.23■■□□□ 1.95
KATNB1-204ENST00000563127 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
KATNB1-204ENST00000563127 TTC21AQ8NDW8 1320 aa27.22■■□□□ 1.95
KATNB1-204ENST00000563127 VPS72Q15906 364 aa27.22■■□□□ 1.95
KATNB1-204ENST00000563127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.22■■□□□ 1.95
KATNB1-204ENST00000563127 CD163L1Q9NR16 1453 aa27.21■■□□□ 1.95
KATNB1-204ENST00000563127 RGS12O14924 1447 aa27.21■■□□□ 1.95
KATNB1-204ENST00000563127 PIK3C2AO00443 1686 aa27.18■■□□□ 1.94
KATNB1-204ENST00000563127 CDCA8Q53HL2 280 aa27.18■■□□□ 1.94
KATNB1-204ENST00000563127 MON2Q7Z3U7 1717 aa27.18■■□□□ 1.94
KATNB1-204ENST00000563127 EIF4G2P78344 907 aaKnown RBP eCLIP27.17■■□□□ 1.942e-10■■■■□ 24.2
KATNB1-204ENST00000563127 A0A1W2PP64 1363 aa27.16■■□□□ 1.94
KATNB1-204ENST00000563127 NINLQ9Y2I6 1382 aa27.16■■□□□ 1.94
KATNB1-204ENST00000563127 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
KATNB1-204ENST00000563127 CPDO75976 1380 aa27.15■■□□□ 1.94
KATNB1-204ENST00000563127 ZBTB7CA1YPR0 619 aa27.15■■□□□ 1.94
KATNB1-204ENST00000563127 ZRANB1Q9UGI0 708 aa27.15■■□□□ 1.94
KATNB1-204ENST00000563127 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
KATNB1-204ENST00000563127 NME9Q86XW9 330 aa27.14■■□□□ 1.94
KATNB1-204ENST00000563127 GLI3P10071 1580 aa27.14■■□□□ 1.93
KATNB1-204ENST00000563127 NRAPQ86VF7 1730 aa27.13■■□□□ 1.93
KATNB1-204ENST00000563127 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
KATNB1-204ENST00000563127 SOX12O15370 315 aa27.12■■□□□ 1.93
KATNB1-204ENST00000563127 EVA1CP58658 441 aa27.12■■□□□ 1.93
KATNB1-204ENST00000563127 EDC4Q6P2E9 1401 aaKnown RBP27.12■■□□□ 1.93
KATNB1-204ENST00000563127 KCNH5Q8NCM2 988 aa27.11■■□□□ 1.93
KATNB1-204ENST00000563127 SLIT3O75094 1523 aa27.11■■□□□ 1.93
KATNB1-204ENST00000563127 ONECUT3O60422 494 aaPredicted RBP27.09■■□□□ 1.93
KATNB1-204ENST00000563127 SPATA31A5Q5VU36 1347 aa27.09■■□□□ 1.93
KATNB1-204ENST00000563127 SPATA31A7Q8IWB4 1347 aa27.09■■□□□ 1.93
KATNB1-204ENST00000563127 USP31Q70CQ4 1352 aa27.09■■□□□ 1.93
KATNB1-204ENST00000563127 SEPT12Q8IYM1 358 aa27.08■■□□□ 1.93
KATNB1-204ENST00000563127 CAMTA1Q9Y6Y1 1673 aa27.08■■□□□ 1.92
KATNB1-204ENST00000563127 UPF1Q92900 1129 aaKnown RBP eCLIP27.07■■□□□ 1.92
KATNB1-204ENST00000563127 ANKRD36BQ8N2N9 1353 aa27.07■■□□□ 1.92
KATNB1-204ENST00000563127 FAM98CQ17RN3 349 aaKnown RBP27.06■■□□□ 1.92
KATNB1-204ENST00000563127 ARHGEF25Q86VW2 580 aa27.06■■□□□ 1.92
KATNB1-204ENST00000563127 POLR3GLQ9BT43 218 aa27.05■■□□□ 1.92
KATNB1-204ENST00000563127 AATKQ6ZMQ8 1374 aa27.05■■□□□ 1.92
KATNB1-204ENST00000563127 A0A0G2JS52 829 aa27.04■■□□□ 1.92
KATNB1-204ENST00000563127 MYT1Q01538 1121 aa27.04■■□□□ 1.92
KATNB1-204ENST00000563127 SPATA31A1Q5TZJ5 1347 aa27.03■■□□□ 1.92
KATNB1-204ENST00000563127 LARP1Q6PKG0 1096 aaKnown RBP27.03■■□□□ 1.92
KATNB1-204ENST00000563127 LMO7Q8WWI1 1683 aa27.03■■□□□ 1.92
KATNB1-204ENST00000563127 USP35Q9P2H5 1018 aa27.02■■□□□ 1.92
KATNB1-204ENST00000563127 AXIN2Q9Y2T1 843 aa27.01■■□□□ 1.91
KATNB1-204ENST00000563127 BRWD3Q6RI45 1802 aa27.01■■□□□ 1.91
KATNB1-204ENST00000563127 COG3Q96JB2 828 aa26.99■■□□□ 1.91
KATNB1-204ENST00000563127 COL18A1P39060 1754 aa26.99■■□□□ 1.91
KATNB1-204ENST00000563127 NFAT5O94916 1531 aa26.98■■□□□ 1.91
KATNB1-204ENST00000563127 USP54Q70EL1 1684 aa26.98■■□□□ 1.91
KATNB1-204ENST00000563127 CARD14Q9BXL6 1004 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms