RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 NRXN3Q9Y4C0 1643 aa10.88□□□□□ -0.67
CNEP1R1-204ENST00000562576 UNC13BO14795 1591 aa10.88□□□□□ -0.67
CNEP1R1-204ENST00000562576 NALCNQ8IZF0 1738 aa10.87□□□□□ -0.67
CNEP1R1-204ENST00000562576 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
CNEP1R1-204ENST00000562576 IFNL1Q8IU54 200 aa10.87□□□□□ -0.67
CNEP1R1-204ENST00000562576 DAPK1P53355 1430 aa10.86□□□□□ -0.67
CNEP1R1-204ENST00000562576 IFFO2Q5TF58 517 aa10.86□□□□□ -0.67
CNEP1R1-204ENST00000562576 UNC5CLQ8IV45 518 aa10.86□□□□□ -0.67
CNEP1R1-204ENST00000562576 CROCC2H7BZ55 1655 aa10.85□□□□□ -0.67
CNEP1R1-204ENST00000562576 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
CNEP1R1-204ENST00000562576 LAMC1P11047 1609 aa10.84□□□□□ -0.67
CNEP1R1-204ENST00000562576 COL22A1Q8NFW1 1626 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-204ENST00000562576 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
CNEP1R1-204ENST00000562576 FOXO3O43524 673 aa10.83□□□□□ -0.68
CNEP1R1-204ENST00000562576 KRT27Q7Z3Y8 459 aa10.83□□□□□ -0.68
CNEP1R1-204ENST00000562576 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
CNEP1R1-204ENST00000562576 TMEM106CQ9BVX2 250 aa10.83□□□□□ -0.68
CNEP1R1-204ENST00000562576 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 ROBO2Q9HCK4 1378 aa10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 EZH2Q15910 746 aaKnown RBP10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 CABLES1Q8TDN4 633 aa10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 SLIT2O94813 1529 aa10.82□□□□□ -0.68
CNEP1R1-204ENST00000562576 PXDNQ92626 1479 aa10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 MARF1Q9Y4F3 1742 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 PTPN23Q9H3S7 1636 aa10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 ONECUT3O60422 494 aaPredicted RBP10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 BAG6P46379 1132 aa10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 RPRD2Q5VT52 1461 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-204ENST00000562576 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
CNEP1R1-204ENST00000562576 E9PCH4 1651 aa10.79□□□□□ -0.68
CNEP1R1-204ENST00000562576 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
CNEP1R1-204ENST00000562576 PLCG2P16885 1265 aa10.78□□□□□ -0.68
CNEP1R1-204ENST00000562576 VPS72Q15906 364 aa10.78□□□□□ -0.68
CNEP1R1-204ENST00000562576 FAM98CQ17RN3 349 aaKnown RBP10.78□□□□□ -0.68
CNEP1R1-204ENST00000562576 ZNF326Q5BKZ1 582 aaKnown RBP10.78□□□□□ -0.68
CNEP1R1-204ENST00000562576 A0A0G2JS52 829 aa10.77□□□□□ -0.69
CNEP1R1-204ENST00000562576 MYT1Q01538 1121 aa10.77□□□□□ -0.69
CNEP1R1-204ENST00000562576 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
CNEP1R1-204ENST00000562576 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
CNEP1R1-204ENST00000562576 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.76□□□□□ -0.69
CNEP1R1-204ENST00000562576 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
CNEP1R1-204ENST00000562576 CAMKK2Q96RR4 588 aa10.76□□□□□ -0.69
CNEP1R1-204ENST00000562576 ANKRD50Q9ULJ7 1429 aa10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 PYGBP11216 843 aa10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 GSE1Q14687 1217 aa10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 NPHP3Q7Z494 1330 aa10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
CNEP1R1-204ENST00000562576 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
CNEP1R1-204ENST00000562576 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
CNEP1R1-204ENST00000562576 TRIM37O94972 964 aa10.73□□□□□ -0.69
CNEP1R1-204ENST00000562576 LOC105371045A0A1W2PR82 267 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 OCEL1Q9H607 264 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 VPS8Q8N3P4 1428 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 ADGRL2O95490 1459 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 CEP350Q5VT06 3117 aa10.72□□□□□ -0.69
CNEP1R1-204ENST00000562576 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 KRT28Q7Z3Y7 464 aa10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 USP32Q8NFA0 1604 aa10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 PDGFDQ9GZP0 370 aaPredicted RBP10.71□□□□□ -0.69
CNEP1R1-204ENST00000562576 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-204ENST00000562576 TNS1Q9HBL0 1735 aaKnown RBP10.7□□□□□ -0.7
CNEP1R1-204ENST00000562576 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
CNEP1R1-204ENST00000562576 NEXMIFQ5QGS0 1516 aa10.69□□□□□ -0.7
CNEP1R1-204ENST00000562576 APBA3O96018 575 aa10.69□□□□□ -0.7
CNEP1R1-204ENST00000562576 ZNF467Q7Z7K2 595 aaPredicted RBP10.69□□□□□ -0.7
CNEP1R1-204ENST00000562576 PLEKHH1Q9ULM0 1364 aa10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 LMOD2Q6P5Q4 547 aa10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 BTG4Q9NY30 223 aa10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 PCDHB8Q9UN66 801 aa10.68□□□□□ -0.7
CNEP1R1-204ENST00000562576 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 NUP155O75694 1391 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 KCNQ2O43526 872 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 STK26Q9P289 416 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 UTRNP46939 3433 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 DISP2A7MBM2 1401 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 NAIPQ13075 1403 aa10.67□□□□□ -0.7
CNEP1R1-204ENST00000562576 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
CNEP1R1-204ENST00000562576 SPON1Q9HCB6 807 aa10.66□□□□□ -0.7
CNEP1R1-204ENST00000562576 SPATA31A5Q5VU36 1347 aa10.64□□□□□ -0.71
CNEP1R1-204ENST00000562576 SPATA31A7Q8IWB4 1347 aa10.64□□□□□ -0.71
CNEP1R1-204ENST00000562576 CLTCL1P53675 1640 aa10.64□□□□□ -0.71
CNEP1R1-204ENST00000562576 NRAPQ86VF7 1730 aa10.64□□□□□ -0.71
CNEP1R1-204ENST00000562576 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 NUP188Q5SRE5 1749 aa10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 NWD2Q9ULI1 1742 aa10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
CNEP1R1-204ENST00000562576 TNS3Q68CZ2 1445 aa10.62□□□□□ -0.71
CNEP1R1-204ENST00000562576 SNPHO15079 494 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms