RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
DENND4A-205ENST00000562540 WDR4P57081 412 aaKnown RBP8.66□□□□□ -1.02
DENND4A-205ENST00000562540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
DENND4A-205ENST00000562540 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
DENND4A-205ENST00000562540 ADH1CP00326 375 aa8.65□□□□□ -1.02
DENND4A-205ENST00000562540 TTLL12Q14166 644 aaPredicted RBP8.65□□□□□ -1.02
DENND4A-205ENST00000562540 BAP1Q92560 729 aa8.65□□□□□ -1.02
DENND4A-205ENST00000562540 KLF16Q9BXK1 252 aaPredicted RBP8.65□□□□□ -1.02
DENND4A-205ENST00000562540 PPFIA3O75145 1194 aa8.64□□□□□ -1.03
DENND4A-205ENST00000562540 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
DENND4A-205ENST00000562540 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
DENND4A-205ENST00000562540 NDUFV2P19404 249 aa8.63□□□□□ -1.03
DENND4A-205ENST00000562540 PTPRNQ16849 979 aa8.63□□□□□ -1.03
DENND4A-205ENST00000562540 MPNDQ8N594 471 aa8.63□□□□□ -1.03
DENND4A-205ENST00000562540 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
DENND4A-205ENST00000562540 KRT76Q01546 638 aa8.62□□□□□ -1.03
DENND4A-205ENST00000562540 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
DENND4A-205ENST00000562540 MAN1A2O60476 641 aa8.61□□□□□ -1.03
DENND4A-205ENST00000562540 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
DENND4A-205ENST00000562540 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
DENND4A-205ENST00000562540 MTMR2Q13614 643 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
DENND4A-205ENST00000562540 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
DENND4A-205ENST00000562540 AMHR2Q16671 573 aa8.59□□□□□ -1.03
DENND4A-205ENST00000562540 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
DENND4A-205ENST00000562540 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
DENND4A-205ENST00000562540 ZIC2O95409 532 aaPredicted RBP8.58□□□□□ -1.04
DENND4A-205ENST00000562540 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
DENND4A-205ENST00000562540 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
DENND4A-205ENST00000562540 RNF225M0QZC1 329 aaPredicted RBP8.57□□□□□ -1.04
DENND4A-205ENST00000562540 ZMYND10O75800 440 aa8.57□□□□□ -1.04
DENND4A-205ENST00000562540 CNTNAP3BQ96NU0 1288 aa8.57□□□□□ -1.04
DENND4A-205ENST00000562540 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
DENND4A-205ENST00000562540 CNTNAP3Q9BZ76 1288 aa8.57□□□□□ -1.04
DENND4A-205ENST00000562540 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
DENND4A-205ENST00000562540 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
DENND4A-205ENST00000562540 DNMT3LQ9UJW3 386 aa8.55□□□□□ -1.04
DENND4A-205ENST00000562540 NR3C2P08235 984 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 CTHP32929 405 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 GPAT2Q6NUI2 795 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 CDK15Q96Q40 435 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
DENND4A-205ENST00000562540 BMP2P12643 396 aa8.53□□□□□ -1.04
DENND4A-205ENST00000562540 GJA5P36382 358 aa8.53□□□□□ -1.04
DENND4A-205ENST00000562540 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
DENND4A-205ENST00000562540 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
DENND4A-205ENST00000562540 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
DENND4A-205ENST00000562540 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
DENND4A-205ENST00000562540 SOS2Q07890 1332 aaPredicted RBP8.53□□□□□ -1.04
DENND4A-205ENST00000562540 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
DENND4A-205ENST00000562540 PARP9Q8IXQ6 854 aa8.52□□□□□ -1.05
DENND4A-205ENST00000562540 FOXJ1Q92949 421 aa8.52□□□□□ -1.05
DENND4A-205ENST00000562540 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
DENND4A-205ENST00000562540 MEIOBQ8N635 442 aa8.51□□□□□ -1.05
DENND4A-205ENST00000562540 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
DENND4A-205ENST00000562540 RNFT1Q5M7Z0 435 aa8.5□□□□□ -1.05
DENND4A-205ENST00000562540 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
DENND4A-205ENST00000562540 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
DENND4A-205ENST00000562540 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
DENND4A-205ENST00000562540 CFAP99D6REC4 459 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 IRS1P35568 1242 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 XP32Q5T750 250 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 SVOPQ8N4V2 548 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 WHAMMQ8TF30 809 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 MAP10Q9P2G4 905 aa8.49□□□□□ -1.05
DENND4A-205ENST00000562540 SPTLC1O15269 473 aa8.48□□□□□ -1.05
DENND4A-205ENST00000562540 UPP2O95045 317 aa8.48□□□□□ -1.05
DENND4A-205ENST00000562540 HRCP23327 699 aa8.48□□□□□ -1.05
DENND4A-205ENST00000562540 GRM5P41594 1212 aa8.48□□□□□ -1.05
DENND4A-205ENST00000562540 NR5A1Q13285 461 aa8.48□□□□□ -1.05
DENND4A-205ENST00000562540 TRIM66O15016 1216 aa8.47□□□□□ -1.05
DENND4A-205ENST00000562540 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
DENND4A-205ENST00000562540 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
DENND4A-205ENST00000562540 F12P00748 615 aaPredicted RBP8.46□□□□□ -1.06
DENND4A-205ENST00000562540 IGHA1P01876 353 aa8.46□□□□□ -1.06
DENND4A-205ENST00000562540 PTSQ03393 145 aa8.46□□□□□ -1.06
DENND4A-205ENST00000562540 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
DENND4A-205ENST00000562540 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.06
DENND4A-205ENST00000562540 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
DENND4A-205ENST00000562540 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
DENND4A-205ENST00000562540 AGERQ15109 404 aa8.45□□□□□ -1.06
DENND4A-205ENST00000562540 TSC1Q92574 1164 aa8.45□□□□□ -1.06
DENND4A-205ENST00000562540 AK7Q96M32 723 aa8.45□□□□□ -1.06
DENND4A-205ENST00000562540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.06
DENND4A-205ENST00000562540 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
DENND4A-205ENST00000562540 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
DENND4A-205ENST00000562540 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
DENND4A-205ENST00000562540 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
DENND4A-205ENST00000562540 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
DENND4A-205ENST00000562540 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
DENND4A-205ENST00000562540 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
DENND4A-205ENST00000562540 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
DENND4A-205ENST00000562540 FOXK2Q01167 660 aa8.41□□□□□ -1.06
DENND4A-205ENST00000562540 NUTM2DQ5VT03 806 aaPredicted RBP8.41□□□□□ -1.06
DENND4A-205ENST00000562540 KANK3Q6NY19 840 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms