RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 NRKQ7Z2Y5 1582 aa12.67□□□□□ -0.38
CDH13-205ENST00000562307 SHPRHQ149N8 1683 aa12.67□□□□□ -0.38
CDH13-205ENST00000562307 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
CDH13-205ENST00000562307 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 NALCNQ8IZF0 1738 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 COG3Q96JB2 828 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
CDH13-205ENST00000562307 HSPA2P54652 639 aa12.65□□□□□ -0.38
CDH13-205ENST00000562307 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
CDH13-205ENST00000562307 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
CDH13-205ENST00000562307 USP31Q70CQ4 1352 aa12.65□□□□□ -0.38
CDH13-205ENST00000562307 ZNF521Q96K83 1311 aa12.64□□□□□ -0.39
CDH13-205ENST00000562307 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
CDH13-205ENST00000562307 NGDNQ8NEJ9 315 aaKnown RBP12.64□□□□□ -0.39
CDH13-205ENST00000562307 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
CDH13-205ENST00000562307 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
CDH13-205ENST00000562307 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
CDH13-205ENST00000562307 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
CDH13-205ENST00000562307 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
CDH13-205ENST00000562307 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
CDH13-205ENST00000562307 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
CDH13-205ENST00000562307 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
CDH13-205ENST00000562307 APAF1O14727 1248 aa12.61□□□□□ -0.39
CDH13-205ENST00000562307 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
CDH13-205ENST00000562307 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
CDH13-205ENST00000562307 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
CDH13-205ENST00000562307 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
CDH13-205ENST00000562307 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
CDH13-205ENST00000562307 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
CDH13-205ENST00000562307 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
CDH13-205ENST00000562307 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
CDH13-205ENST00000562307 FBLN1P23142 703 aa12.59□□□□□ -0.39
CDH13-205ENST00000562307 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDH13-205ENST00000562307 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
CDH13-205ENST00000562307 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
CDH13-205ENST00000562307 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
CDH13-205ENST00000562307 DCCP43146 1447 aa12.59□□□□□ -0.39
CDH13-205ENST00000562307 STRCQ7RTU9 1775 aa12.58□□□□□ -0.39
CDH13-205ENST00000562307 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 IL13P35225 146 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
CDH13-205ENST00000562307 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 PNNQ9H307 717 aaKnown RBP12.58□□□□□ -0.4
CDH13-205ENST00000562307 STRCP1A6NGW2 1772 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 IQSEC2Q5JU85 1478 aa12.58□□□□□ -0.4
CDH13-205ENST00000562307 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 FCHSD2O94868 740 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 NEFLP07196 543 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 ESCO1Q5FWF5 840 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
CDH13-205ENST00000562307 MAP2P11137 1827 aaKnown RBP12.56□□□□□ -0.4
CDH13-205ENST00000562307 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
CDH13-205ENST00000562307 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
CDH13-205ENST00000562307 FKBP8Q14318 412 aa12.56□□□□□ -0.4
CDH13-205ENST00000562307 ERICH6BQ5W0A0 696 aa12.56□□□□□ -0.4
CDH13-205ENST00000562307 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
CDH13-205ENST00000562307 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
CDH13-205ENST00000562307 ORAI2Q96SN7 254 aa12.55□□□□□ -0.4
CDH13-205ENST00000562307 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
CDH13-205ENST00000562307 NLRP6P59044 892 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 PSME1Q06323 249 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 MST1RQ04912 1400 aa12.54□□□□□ -0.4
CDH13-205ENST00000562307 ATF3P18847 181 aa12.53□□□□□ -0.4
CDH13-205ENST00000562307 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
CDH13-205ENST00000562307 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
CDH13-205ENST00000562307 KIF1AQ12756 1690 aa12.52□□□□□ -0.4
CDH13-205ENST00000562307 E9PSI1 815 aa12.52□□□□□ -0.41
CDH13-205ENST00000562307 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
CDH13-205ENST00000562307 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
CDH13-205ENST00000562307 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
CDH13-205ENST00000562307 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
CDH13-205ENST00000562307 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
CDH13-205ENST00000562307 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
CDH13-205ENST00000562307 ILDR1Q86SU0 546 aaPredicted RBP12.51□□□□□ -0.41
CDH13-205ENST00000562307 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
CDH13-205ENST00000562307 FOXO3O43524 673 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
CDH13-205ENST00000562307 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
CDH13-205ENST00000562307 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 FLT4P35916 1363 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 MSH6P52701 1360 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 PEAK1Q9H792 1746 aa12.5□□□□□ -0.41
CDH13-205ENST00000562307 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
CDH13-205ENST00000562307 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
CDH13-205ENST00000562307 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
CDH13-205ENST00000562307 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
CDH13-205ENST00000562307 KCNH5Q8NCM2 988 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms