RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ARHGEF10O15013 1369 aa18.84■□□□□ 0.61
CDH1-204ENST00000562118 PSME1Q06323 249 aa18.84■□□□□ 0.61
CDH1-204ENST00000562118 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.6
CDH1-204ENST00000562118 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
CDH1-204ENST00000562118 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
CDH1-204ENST00000562118 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
CDH1-204ENST00000562118 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
CDH1-204ENST00000562118 ANKRD36BQ8N2N9 1353 aa18.81■□□□□ 0.6
CDH1-204ENST00000562118 SLIT3O75094 1523 aa18.79■□□□□ 0.6
CDH1-204ENST00000562118 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
CDH1-204ENST00000562118 SLC12A5Q9H2X9 1139 aa18.78■□□□□ 0.6
CDH1-204ENST00000562118 C11orf95C9JLR9 678 aaPredicted RBP18.77■□□□□ 0.6
CDH1-204ENST00000562118 USP19O94966 1318 aa18.76■□□□□ 0.59
CDH1-204ENST00000562118 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
CDH1-204ENST00000562118 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
CDH1-204ENST00000562118 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
CDH1-204ENST00000562118 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.75■□□□□ 0.59
CDH1-204ENST00000562118 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
CDH1-204ENST00000562118 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
CDH1-204ENST00000562118 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
CDH1-204ENST00000562118 NWD2Q9ULI1 1742 aa18.74■□□□□ 0.59
CDH1-204ENST00000562118 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
CDH1-204ENST00000562118 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
CDH1-204ENST00000562118 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
CDH1-204ENST00000562118 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
CDH1-204ENST00000562118 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
CDH1-204ENST00000562118 NFAT5O94916 1531 aa18.71■□□□□ 0.59
CDH1-204ENST00000562118 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
CDH1-204ENST00000562118 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
CDH1-204ENST00000562118 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
CDH1-204ENST00000562118 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
CDH1-204ENST00000562118 TMC1Q8TDI8 760 aa18.7■□□□□ 0.58
CDH1-204ENST00000562118 ANKRD26Q9UPS8 1709 aa18.7■□□□□ 0.58
CDH1-204ENST00000562118 SLIT2O94813 1529 aa18.69■□□□□ 0.58
CDH1-204ENST00000562118 CPDO75976 1380 aa18.68■□□□□ 0.58
CDH1-204ENST00000562118 CCDC7Q96M83 1385 aa18.68■□□□□ 0.58
CDH1-204ENST00000562118 ABCC6O95255 1503 aa18.68■□□□□ 0.58
CDH1-204ENST00000562118 COL18A1P39060 1754 aa18.68■□□□□ 0.58
CDH1-204ENST00000562118 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
CDH1-204ENST00000562118 ABTB2Q8N961 1025 aa18.67■□□□□ 0.58
CDH1-204ENST00000562118 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
CDH1-204ENST00000562118 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
CDH1-204ENST00000562118 RGS17Q9UGC6 210 aaPredicted RBP18.66■□□□□ 0.58
CDH1-204ENST00000562118 FNBP4Q8N3X1 1017 aaPredicted RBP18.65■□□□□ 0.58
CDH1-204ENST00000562118 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
CDH1-204ENST00000562118 NLRP13Q86W25 1043 aa18.64■□□□□ 0.57
CDH1-204ENST00000562118 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
CDH1-204ENST00000562118 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
CDH1-204ENST00000562118 LTN1O94822 1766 aa18.63■□□□□ 0.57
CDH1-204ENST00000562118 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
CDH1-204ENST00000562118 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
CDH1-204ENST00000562118 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
CDH1-204ENST00000562118 GCP02774 474 aa18.61■□□□□ 0.57
CDH1-204ENST00000562118 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
CDH1-204ENST00000562118 NME9Q86XW9 330 aa18.61■□□□□ 0.57
CDH1-204ENST00000562118 NLRP6P59044 892 aa18.6■□□□□ 0.57
CDH1-204ENST00000562118 ATRNO75882 1429 aa18.59■□□□□ 0.57
CDH1-204ENST00000562118 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
CDH1-204ENST00000562118 FYB1O15117 783 aa18.59■□□□□ 0.57
CDH1-204ENST00000562118 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
CDH1-204ENST00000562118 NUTM2GQ5VZR2 741 aa18.59■□□□□ 0.57
CDH1-204ENST00000562118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDH1-204ENST00000562118 AFF2P51816 1311 aa18.58■□□□□ 0.57
CDH1-204ENST00000562118 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
CDH1-204ENST00000562118 NSD2O96028 1365 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 KCNH5Q8NCM2 988 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 PANK3Q9H999 370 aa18.57■□□□□ 0.56
CDH1-204ENST00000562118 AATKQ6ZMQ8 1374 aa18.56■□□□□ 0.56
CDH1-204ENST00000562118 RGPD5Q99666 1765 aa18.56■□□□□ 0.56
CDH1-204ENST00000562118 PER1O15534 1290 aaPredicted RBP18.56■□□□□ 0.56
CDH1-204ENST00000562118 MEX3CQ5U5Q3 659 aaKnown RBP18.56■□□□□ 0.56
CDH1-204ENST00000562118 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
CDH1-204ENST00000562118 ZNF772Q68DY9 489 aaPredicted RBP18.55■□□□□ 0.56
CDH1-204ENST00000562118 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
CDH1-204ENST00000562118 GLI3P10071 1580 aa18.55■□□□□ 0.56
CDH1-204ENST00000562118 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
CDH1-204ENST00000562118 CDK12Q9NYV4 1490 aaPredicted RBP18.54■□□□□ 0.56
CDH1-204ENST00000562118 COL5A2P05997 1499 aaPredicted RBP18.53■□□□□ 0.56
CDH1-204ENST00000562118 NGLY1Q96IV0 654 aa18.53■□□□□ 0.56
CDH1-204ENST00000562118 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
CDH1-204ENST00000562118 HAP1P54257 671 aaPredicted RBP18.52■□□□□ 0.56
CDH1-204ENST00000562118 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
CDH1-204ENST00000562118 POTEAQ6S8J7 498 aa18.52■□□□□ 0.56
CDH1-204ENST00000562118 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
CDH1-204ENST00000562118 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
CDH1-204ENST00000562118 COG3Q96JB2 828 aa18.51■□□□□ 0.55
CDH1-204ENST00000562118 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
CDH1-204ENST00000562118 PRDM11Q9NQV5 511 aa18.51■□□□□ 0.55
CDH1-204ENST00000562118 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
CDH1-204ENST00000562118 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
CDH1-204ENST00000562118 SMG6Q86US8 1419 aaKnown RBP18.5■□□□□ 0.55
CDH1-204ENST00000562118 ZC3H6P61129 1189 aaKnown RBP18.5■□□□□ 0.55
CDH1-204ENST00000562118 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
CDH1-204ENST00000562118 USP21Q9UK80 565 aa18.5■□□□□ 0.55
CDH1-204ENST00000562118 WNK3Q9BYP7 1800 aa18.5■□□□□ 0.55
CDH1-204ENST00000562118 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
CDH1-204ENST00000562118 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms