RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
LINC01243-201ENST00000562065 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
LINC01243-201ENST00000562065 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
LINC01243-201ENST00000562065 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
LINC01243-201ENST00000562065 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
LINC01243-201ENST00000562065 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
LINC01243-201ENST00000562065 LYPD8Q6UX82 237 aa12.33□□□□□ -0.44
LINC01243-201ENST00000562065 LIMD1Q9UGP4 676 aa12.33□□□□□ -0.44
LINC01243-201ENST00000562065 PRPF38BQ5VTL8 546 aaKnown RBP12.32□□□□□ -0.44
LINC01243-201ENST00000562065 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
LINC01243-201ENST00000562065 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
LINC01243-201ENST00000562065 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
LINC01243-201ENST00000562065 QPCTQ16769 361 aa12.3□□□□□ -0.44
LINC01243-201ENST00000562065 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
LINC01243-201ENST00000562065 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
LINC01243-201ENST00000562065 CAPN5O15484 640 aaPredicted RBP12.28□□□□□ -0.44
LINC01243-201ENST00000562065 VARSP26640 1264 aaKnown RBP12.28□□□□□ -0.44
LINC01243-201ENST00000562065 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
LINC01243-201ENST00000562065 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
LINC01243-201ENST00000562065 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
LINC01243-201ENST00000562065 BMP1P13497 986 aa12.27□□□□□ -0.45
LINC01243-201ENST00000562065 AGERQ15109 404 aa12.27□□□□□ -0.45
LINC01243-201ENST00000562065 WFS1O76024 890 aa12.25□□□□□ -0.45
LINC01243-201ENST00000562065 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
LINC01243-201ENST00000562065 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
LINC01243-201ENST00000562065 ARID5BQ14865 1188 aa12.25□□□□□ -0.45
LINC01243-201ENST00000562065 FOXJ1Q92949 421 aa12.25□□□□□ -0.45
LINC01243-201ENST00000562065 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
LINC01243-201ENST00000562065 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
LINC01243-201ENST00000562065 NACADO15069 1562 aa12.24□□□□□ -0.45
LINC01243-201ENST00000562065 FAM174AQ8TBP5 190 aa12.24□□□□□ -0.45
LINC01243-201ENST00000562065 NNTQ13423 1086 aa12.23□□□□□ -0.45
LINC01243-201ENST00000562065 HELBQ8NG08 1087 aaPredicted RBP12.23□□□□□ -0.45
LINC01243-201ENST00000562065 LILRB3O75022 631 aa12.22□□□□□ -0.45
LINC01243-201ENST00000562065 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
LINC01243-201ENST00000562065 ATP1B4Q9UN42 357 aaPredicted RBP12.22□□□□□ -0.45
LINC01243-201ENST00000562065 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.45
LINC01243-201ENST00000562065 RTL5Q5HYW3 569 aaPredicted RBP12.21□□□□□ -0.45
LINC01243-201ENST00000562065 TRIM46Q7Z4K8 759 aa12.2□□□□□ -0.46
LINC01243-201ENST00000562065 WDR4P57081 412 aaKnown RBP12.18□□□□□ -0.46
LINC01243-201ENST00000562065 ADH1CP00326 375 aa12.17□□□□□ -0.46
LINC01243-201ENST00000562065 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
LINC01243-201ENST00000562065 LCE2AQ5TA79 106 aaPredicted RBP12.17□□□□□ -0.46
LINC01243-201ENST00000562065 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
LINC01243-201ENST00000562065 BCANQ96GW7 911 aa12.17□□□□□ -0.46
LINC01243-201ENST00000562065 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
LINC01243-201ENST00000562065 MPNDQ8N594 471 aa12.16□□□□□ -0.46
LINC01243-201ENST00000562065 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
LINC01243-201ENST00000562065 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
LINC01243-201ENST00000562065 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
LINC01243-201ENST00000562065 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
LINC01243-201ENST00000562065 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
LINC01243-201ENST00000562065 TIMP2P16035 220 aa12.13□□□□□ -0.47
LINC01243-201ENST00000562065 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
LINC01243-201ENST00000562065 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
LINC01243-201ENST00000562065 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
LINC01243-201ENST00000562065 SCARF1Q14162 830 aa12.11□□□□□ -0.47
LINC01243-201ENST00000562065 MRPL14Q6P1L8 145 aaKnown RBP12.11□□□□□ -0.47
LINC01243-201ENST00000562065 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
LINC01243-201ENST00000562065 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
LINC01243-201ENST00000562065 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
LINC01243-201ENST00000562065 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
LINC01243-201ENST00000562065 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
LINC01243-201ENST00000562065 ZFAND3Q9H8U3 227 aa12.09□□□□□ -0.47
LINC01243-201ENST00000562065 NR3C2P08235 984 aa12.08□□□□□ -0.48
LINC01243-201ENST00000562065 NR5A1Q13285 461 aa12.08□□□□□ -0.48
LINC01243-201ENST00000562065 SKIV2LQ15477 1246 aaKnown RBP12.08□□□□□ -0.48
LINC01243-201ENST00000562065 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
LINC01243-201ENST00000562065 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 FSHRP23945 695 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
LINC01243-201ENST00000562065 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 ITPKCQ96DU7 683 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 BICRAQ9NZM4 1560 aa12.07□□□□□ -0.48
LINC01243-201ENST00000562065 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
LINC01243-201ENST00000562065 VEGFBP49765 207 aa12.06□□□□□ -0.48
LINC01243-201ENST00000562065 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
LINC01243-201ENST00000562065 LRRN4Q8WUT4 740 aa12.06□□□□□ -0.48
LINC01243-201ENST00000562065 GRM5P41594 1212 aa12.05□□□□□ -0.48
LINC01243-201ENST00000562065 C6orf118Q5T5N4 469 aa12.05□□□□□ -0.48
LINC01243-201ENST00000562065 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
LINC01243-201ENST00000562065 SH3RF1Q7Z6J0 888 aa12.05□□□□□ -0.48
LINC01243-201ENST00000562065 C1QTNF2Q9BXJ5 285 aa12.05□□□□□ -0.48
LINC01243-201ENST00000562065 KLF16Q9BXK1 252 aaPredicted RBP12.05□□□□□ -0.48
LINC01243-201ENST00000562065 LCE2CQ5TA81 110 aa12.04□□□□□ -0.48
LINC01243-201ENST00000562065 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
LINC01243-201ENST00000562065 SOBPA7XYQ1 873 aa12.02□□□□□ -0.49
LINC01243-201ENST00000562065 WIPF1O43516 503 aa12.02□□□□□ -0.49
LINC01243-201ENST00000562065 AP1G2O75843 785 aa12.02□□□□□ -0.49
LINC01243-201ENST00000562065 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
LINC01243-201ENST00000562065 FBXO31Q5XUX0 539 aaPredicted RBP12.02□□□□□ -0.49
LINC01243-201ENST00000562065 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
LINC01243-201ENST00000562065 UPP2O95045 317 aa12.01□□□□□ -0.49
LINC01243-201ENST00000562065 ARHGAP9Q9BRR9 750 aa12.01□□□□□ -0.49
LINC01243-201ENST00000562065 NR6A1Q15406 480 aa12□□□□□ -0.49
LINC01243-201ENST00000562065 ERFEQ4G0M1 354 aa12□□□□□ -0.49
LINC01243-201ENST00000562065 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
LINC01243-201ENST00000562065 FKBPLQ9UIM3 349 aa12□□□□□ -0.49
LINC01243-201ENST00000562065 MAP4K5Q9Y4K4 846 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms