RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 CPSF1Q10570 1443 aaKnown RBP10.04□□□□□ -0.8
TUBGCP4-203ENST00000562053 SSH2Q76I76 1423 aa10.04□□□□□ -0.8
TUBGCP4-203ENST00000562053 ACEP12821 1306 aa10.04□□□□□ -0.8
TUBGCP4-203ENST00000562053 BRD4O60885 1362 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-203ENST00000562053 SLIT3O75094 1523 aa10.02□□□□□ -0.8
TUBGCP4-203ENST00000562053 NWD2Q9ULI1 1742 aa10.02□□□□□ -0.8
TUBGCP4-203ENST00000562053 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
TUBGCP4-203ENST00000562053 NGDNQ8NEJ9 315 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-203ENST00000562053 PUS7Q96PZ0 661 aaKnown RBP10.02□□□□□ -0.81
TUBGCP4-203ENST00000562053 NRAPQ86VF7 1730 aa10.02□□□□□ -0.81
TUBGCP4-203ENST00000562053 KIF20BQ96Q89 1820 aa10.01□□□□□ -0.81
TUBGCP4-203ENST00000562053 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
TUBGCP4-203ENST00000562053 PSME1Q06323 249 aa10.01□□□□□ -0.81
TUBGCP4-203ENST00000562053 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
TUBGCP4-203ENST00000562053 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
TUBGCP4-203ENST00000562053 TMF1P82094 1093 aa10□□□□□ -0.81
TUBGCP4-203ENST00000562053 CABP1Q9NZU7 370 aa10□□□□□ -0.81
TUBGCP4-203ENST00000562053 COL14A1Q05707 1796 aaKnown RBP10□□□□□ -0.81
TUBGCP4-203ENST00000562053 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 USP19O94966 1318 aa9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 LMO7Q8WWI1 1683 aa9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 ANKRD36BQ8N2N9 1353 aa9.99□□□□□ -0.81
TUBGCP4-203ENST00000562053 NFAT5O94916 1531 aa9.98□□□□□ -0.81
TUBGCP4-203ENST00000562053 ANKRD26Q9UPS8 1709 aa9.98□□□□□ -0.81
TUBGCP4-203ENST00000562053 SLIT2O94813 1529 aa9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 NUTM2AQ8IVF1 878 aaPredicted RBP9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 OVOS2A0A0J9YW53 1432 aa9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 OVOS2Q6IE36 1432 aa9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 ABCC6O95255 1503 aa9.97□□□□□ -0.81
TUBGCP4-203ENST00000562053 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
TUBGCP4-203ENST00000562053 CDCA8Q53HL2 280 aa9.96□□□□□ -0.82
TUBGCP4-203ENST00000562053 TTC21AQ8NDW8 1320 aa9.96□□□□□ -0.82
TUBGCP4-203ENST00000562053 LTN1O94822 1766 aa9.96□□□□□ -0.82
TUBGCP4-203ENST00000562053 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
TUBGCP4-203ENST00000562053 MEX3CQ5U5Q3 659 aaKnown RBP9.95□□□□□ -0.82
TUBGCP4-203ENST00000562053 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
TUBGCP4-203ENST00000562053 RGS17Q9UGC6 210 aaPredicted RBP9.95□□□□□ -0.82
TUBGCP4-203ENST00000562053 TTC21BQ7Z4L5 1316 aa9.95□□□□□ -0.82
TUBGCP4-203ENST00000562053 COL18A1P39060 1754 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 BCL9LQ86UU0 1499 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 CPDO75976 1380 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 AFF2P51816 1311 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 TMC1Q8TDI8 760 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 CNKSR2Q8WXI2 1034 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 SLC12A5Q9H2X9 1139 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
TUBGCP4-203ENST00000562053 GLI3P10071 1580 aa9.93□□□□□ -0.82
TUBGCP4-203ENST00000562053 ATRNO75882 1429 aa9.93□□□□□ -0.82
TUBGCP4-203ENST00000562053 HDGFL2Q7Z4V5 671 aaPredicted RBP9.93□□□□□ -0.82
TUBGCP4-203ENST00000562053 C8orf37Q96NL8 207 aa9.93□□□□□ -0.82
TUBGCP4-203ENST00000562053 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
TUBGCP4-203ENST00000562053 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
TUBGCP4-203ENST00000562053 NSD3Q9BZ95 1437 aa9.92□□□□□ -0.82
TUBGCP4-203ENST00000562053 ABTB2Q8N961 1025 aa9.92□□□□□ -0.82
TUBGCP4-203ENST00000562053 KIAA0232Q92628 1395 aa9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 NUTM2GQ5VZR2 741 aa9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 ZNF772Q68DY9 489 aaPredicted RBP9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
TUBGCP4-203ENST00000562053 FAM208AQ9UK61 1670 aaKnown RBP9.9□□□□□ -0.82
TUBGCP4-203ENST00000562053 NME9Q86XW9 330 aa9.9□□□□□ -0.82
TUBGCP4-203ENST00000562053 RGPD5Q99666 1765 aa9.9□□□□□ -0.82
TUBGCP4-203ENST00000562053 COL5A2P05997 1499 aaPredicted RBP9.9□□□□□ -0.83
TUBGCP4-203ENST00000562053 RGS12O14924 1447 aa9.9□□□□□ -0.83
TUBGCP4-203ENST00000562053 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.83
TUBGCP4-203ENST00000562053 CAMTA1Q9Y6Y1 1673 aa9.9□□□□□ -0.83
TUBGCP4-203ENST00000562053 CCDC7Q96M83 1385 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 NLRP6P59044 892 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 NGLY1Q96IV0 654 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 PRDM11Q9NQV5 511 aa9.89□□□□□ -0.83
TUBGCP4-203ENST00000562053 GCP02774 474 aa9.88□□□□□ -0.83
TUBGCP4-203ENST00000562053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
TUBGCP4-203ENST00000562053 AATKQ6ZMQ8 1374 aa9.88□□□□□ -0.83
TUBGCP4-203ENST00000562053 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
TUBGCP4-203ENST00000562053 USP21Q9UK80 565 aa9.87□□□□□ -0.83
TUBGCP4-203ENST00000562053 WASHC2AQ641Q2 1341 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 FAM83GA6ND36 823 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 ILDR2Q71H61 639 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 UNC5CLQ8IV45 518 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 KCNH5Q8NCM2 988 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 CARD14Q9BXL6 1004 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 BRWD3Q6RI45 1802 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 RTL1A6NKG5 1358 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 NSD2O96028 1365 aa9.86□□□□□ -0.83
TUBGCP4-203ENST00000562053 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
TUBGCP4-203ENST00000562053 ZC3H6P61129 1189 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms