RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
SPG7-205ENST00000561945 PHRF1Q9P1Y6 1649 aaKnown RBP21.26■□□□□ 0.99
SPG7-205ENST00000561945 POLR3AO14802 1390 aaPredicted RBP21.25■□□□□ 0.99
SPG7-205ENST00000561945 THSD7AQ9UPZ6 1657 aa21.24■□□□□ 0.99
SPG7-205ENST00000561945 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
SPG7-205ENST00000561945 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
SPG7-205ENST00000561945 NGDNQ8NEJ9 315 aaKnown RBP21.23■□□□□ 0.99
SPG7-205ENST00000561945 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
SPG7-205ENST00000561945 KRT27Q7Z3Y8 459 aa21.22■□□□□ 0.99
SPG7-205ENST00000561945 CDK19Q9BWU1 502 aa21.2■□□□□ 0.98
SPG7-205ENST00000561945 SPATA31A5Q5VU36 1347 aa21.2■□□□□ 0.98
SPG7-205ENST00000561945 SPATA31A7Q8IWB4 1347 aa21.2■□□□□ 0.98
SPG7-205ENST00000561945 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
SPG7-205ENST00000561945 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
SPG7-205ENST00000561945 CCDC61Q9Y6R9 512 aa21.18■□□□□ 0.98
SPG7-205ENST00000561945 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
SPG7-205ENST00000561945 NRKQ7Z2Y5 1582 aa21.16■□□□□ 0.98
SPG7-205ENST00000561945 FAM98CQ17RN3 349 aaKnown RBP21.16■□□□□ 0.98
SPG7-205ENST00000561945 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
SPG7-205ENST00000561945 ACEP12821 1306 aa21.15■□□□□ 0.98
SPG7-205ENST00000561945 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
SPG7-205ENST00000561945 NBPF1Q3BBV0 1214 aa21.15■□□□□ 0.98
SPG7-205ENST00000561945 NBPF8Q3BBV2 869 aa21.15■□□□□ 0.98
SPG7-205ENST00000561945 LMO7Q8WWI1 1683 aa21.15■□□□□ 0.98
SPG7-205ENST00000561945 KIAA0232Q92628 1395 aa21.14■□□□□ 0.98
SPG7-205ENST00000561945 SF3B2Q13435 895 aaKnown RBP21.14■□□□□ 0.97
SPG7-205ENST00000561945 PRDM11Q9NQV5 511 aa21.14■□□□□ 0.97
SPG7-205ENST00000561945 TNS1Q9HBL0 1735 aaKnown RBP21.13■□□□□ 0.97
SPG7-205ENST00000561945 QRICH2Q9H0J4 1663 aa21.13■□□□□ 0.97
SPG7-205ENST00000561945 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
SPG7-205ENST00000561945 BRD4O60885 1362 aaPredicted RBP21.12■□□□□ 0.97
SPG7-205ENST00000561945 LRP5O75197 1615 aa21.12■□□□□ 0.97
SPG7-205ENST00000561945 SPATA31A1Q5TZJ5 1347 aa21.12■□□□□ 0.97
SPG7-205ENST00000561945 CPDO75976 1380 aa21.11■□□□□ 0.97
SPG7-205ENST00000561945 USP19O94966 1318 aa21.11■□□□□ 0.97
SPG7-205ENST00000561945 CENPJQ9HC77 1338 aaPredicted RBP21.09■□□□□ 0.97
SPG7-205ENST00000561945 TRPM1Q7Z4N2 1603 aa21.09■□□□□ 0.97
SPG7-205ENST00000561945 PPIP5K1Q6PFW1 1433 aa21.09■□□□□ 0.97
SPG7-205ENST00000561945 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
SPG7-205ENST00000561945 SSH2Q76I76 1423 aa21.07■□□□□ 0.96
SPG7-205ENST00000561945 BAG6P46379 1132 aa21.07■□□□□ 0.96
SPG7-205ENST00000561945 A0A0G2JS52 829 aa21.05■□□□□ 0.96
SPG7-205ENST00000561945 MYT1Q01538 1121 aa21.05■□□□□ 0.96
SPG7-205ENST00000561945 CHRNA2Q15822 529 aa21.05■□□□□ 0.96
SPG7-205ENST00000561945 BARGINQ6ZT62 677 aa21.05■□□□□ 0.96
SPG7-205ENST00000561945 SLIT3O75094 1523 aa21.04■□□□□ 0.96
SPG7-205ENST00000561945 ZC3H6P61129 1189 aaKnown RBP21.04■□□□□ 0.96
SPG7-205ENST00000561945 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
SPG7-205ENST00000561945 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
SPG7-205ENST00000561945 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
SPG7-205ENST00000561945 USP6P35125 1406 aa21.03■□□□□ 0.96
SPG7-205ENST00000561945 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
SPG7-205ENST00000561945 SRPK2P78362 688 aaKnown RBP21.02■□□□□ 0.96
SPG7-205ENST00000561945 NLRP13Q86W25 1043 aa21.02■□□□□ 0.96
SPG7-205ENST00000561945 L3MBTL2Q969R5 705 aa21.02■□□□□ 0.96
SPG7-205ENST00000561945 CABP2Q9NPB3 220 aa21.01■□□□□ 0.95
SPG7-205ENST00000561945 COL5A2P05997 1499 aaPredicted RBP21.01■□□□□ 0.95
SPG7-205ENST00000561945 PIK3C2AO00443 1686 aa21■□□□□ 0.95
SPG7-205ENST00000561945 GCP02774 474 aa21■□□□□ 0.95
SPG7-205ENST00000561945 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
SPG7-205ENST00000561945 STRN4Q9NRL3 753 aa21■□□□□ 0.95
SPG7-205ENST00000561945 COL18A1P39060 1754 aa21■□□□□ 0.95
SPG7-205ENST00000561945 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
SPG7-205ENST00000561945 AKAP12Q02952 1782 aa20.99■□□□□ 0.95
SPG7-205ENST00000561945 RREB1Q92766 1687 aa20.99■□□□□ 0.95
SPG7-205ENST00000561945 EN1Q05925 392 aaPredicted RBP20.98■□□□□ 0.95
SPG7-205ENST00000561945 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
SPG7-205ENST00000561945 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
SPG7-205ENST00000561945 CABP1Q9NZU7 370 aa20.97■□□□□ 0.95
SPG7-205ENST00000561945 EVA1CP58658 441 aa20.96■□□□□ 0.95
SPG7-205ENST00000561945 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
SPG7-205ENST00000561945 CAMKK2Q96RR4 588 aa20.96■□□□□ 0.95
SPG7-205ENST00000561945 AATKQ6ZMQ8 1374 aa20.96■□□□□ 0.95
SPG7-205ENST00000561945 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
SPG7-205ENST00000561945 PSDA5PKW4 1024 aaPredicted RBP20.95■□□□□ 0.94
SPG7-205ENST00000561945 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
SPG7-205ENST00000561945 CRB1P82279 1406 aa20.95■□□□□ 0.94
SPG7-205ENST00000561945 WNK3Q9BYP7 1800 aa20.94■□□□□ 0.94
SPG7-205ENST00000561945 NUP188Q5SRE5 1749 aa20.92■□□□□ 0.94
SPG7-205ENST00000561945 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
SPG7-205ENST00000561945 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
SPG7-205ENST00000561945 USP35Q9P2H5 1018 aa20.92■□□□□ 0.94
SPG7-205ENST00000561945 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
SPG7-205ENST00000561945 RGPD3A6NKT7 1758 aaPredicted RBP20.91■□□□□ 0.94
SPG7-205ENST00000561945 LRRC37A3O60309 1634 aa20.91■□□□□ 0.94
SPG7-205ENST00000561945 ROCK2O75116 1388 aaKnown RBP20.91■□□□□ 0.94
SPG7-205ENST00000561945 TRIM37O94972 964 aa20.91■□□□□ 0.94
SPG7-205ENST00000561945 RGPD4Q7Z3J3 1758 aa20.91■□□□□ 0.94
SPG7-205ENST00000561945 ZNF692Q9BU19 519 aaPredicted RBP20.91■□□□□ 0.94
SPG7-205ENST00000561945 SBNO2Q9Y2G9 1366 aa20.91■□□□□ 0.94
SPG7-205ENST00000561945 MON2Q7Z3U7 1717 aa20.9■□□□□ 0.94
SPG7-205ENST00000561945 USP54Q70EL1 1684 aa20.9■□□□□ 0.94
SPG7-205ENST00000561945 NLRP6P59044 892 aa20.9■□□□□ 0.94
SPG7-205ENST00000561945 PDE3BQ13370 1112 aa20.9■□□□□ 0.94
SPG7-205ENST00000561945 C11orf95C9JLR9 678 aaPredicted RBP20.89■□□□□ 0.93
SPG7-205ENST00000561945 SBF2Q86WG5 1849 aa20.89■□□□□ 0.93
SPG7-205ENST00000561945 ABCC6O95255 1503 aa20.88■□□□□ 0.93
SPG7-205ENST00000561945 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
SPG7-205ENST00000561945 TTC21AQ8NDW8 1320 aa20.87■□□□□ 0.93
SPG7-205ENST00000561945 NFAT5O94916 1531 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms