RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
CAPN3-210ENST00000561817 CFAP70Q5T0N1 1121 aa9.09□□□□□ -0.95
CAPN3-210ENST00000561817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-210ENST00000561817 CEBPAP49715 358 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-210ENST00000561817 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-210ENST00000561817 C14orf93Q9H972 538 aaKnown RBP9.08□□□□□ -0.96
CAPN3-210ENST00000561817 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
CAPN3-210ENST00000561817 DISP3Q9P2K9 1392 aa9.08□□□□□ -0.96
CAPN3-210ENST00000561817 SOX12O15370 315 aa9.07□□□□□ -0.96
CAPN3-210ENST00000561817 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
CAPN3-210ENST00000561817 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-210ENST00000561817 ANP32CO43423 234 aa9.06□□□□□ -0.96
CAPN3-210ENST00000561817 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
CAPN3-210ENST00000561817 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
CAPN3-210ENST00000561817 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
CAPN3-210ENST00000561817 KDM5AP29375 1690 aaKnown RBP9.04□□□□□ -0.96
CAPN3-210ENST00000561817 SBNO2Q9Y2G9 1366 aa9.04□□□□□ -0.96
CAPN3-210ENST00000561817 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
CAPN3-210ENST00000561817 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-210ENST00000561817 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-210ENST00000561817 SETD1BQ9UPS6 1966 aaKnown RBP9.03□□□□□ -0.96
CAPN3-210ENST00000561817 TNRQ92752 1358 aa9.02□□□□□ -0.97
CAPN3-210ENST00000561817 PER1O15534 1290 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-210ENST00000561817 SETD1AO15047 1707 aaKnown RBP9.02□□□□□ -0.97
CAPN3-210ENST00000561817 UBR1Q8IWV7 1749 aa9.02□□□□□ -0.97
CAPN3-210ENST00000561817 EIF3AQ14152 1382 aaKnown RBP9.01□□□□□ -0.97
CAPN3-210ENST00000561817 MYOM1P52179 1685 aa9.01□□□□□ -0.97
CAPN3-210ENST00000561817 TMF1P82094 1093 aa9.01□□□□□ -0.97
CAPN3-210ENST00000561817 ARHGEF28Q8N1W1 1705 aaKnown RBP9.01□□□□□ -0.97
CAPN3-210ENST00000561817 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
CAPN3-210ENST00000561817 ALKQ9UM73 1620 aa9.01□□□□□ -0.97
CAPN3-210ENST00000561817 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
CAPN3-210ENST00000561817 EMP3P54852 163 aa9□□□□□ -0.97
CAPN3-210ENST00000561817 CCDC184Q52MB2 194 aa9□□□□□ -0.97
CAPN3-210ENST00000561817 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
CAPN3-210ENST00000561817 LMTK3Q96Q04 1460 aa9□□□□□ -0.97
CAPN3-210ENST00000561817 ECM2O94769 699 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-210ENST00000561817 HSPA2P54652 639 aa8.99□□□□□ -0.97
CAPN3-210ENST00000561817 TMEM132EQ6IEE7 984 aa8.99□□□□□ -0.97
CAPN3-210ENST00000561817 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
CAPN3-210ENST00000561817 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
CAPN3-210ENST00000561817 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
CAPN3-210ENST00000561817 QRICH2Q9H0J4 1663 aa8.99□□□□□ -0.97
CAPN3-210ENST00000561817 NLRP1Q9C000 1473 aa8.98□□□□□ -0.97
CAPN3-210ENST00000561817 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
CAPN3-210ENST00000561817 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-210ENST00000561817 CENPJQ9HC77 1338 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-210ENST00000561817 CENPBP07199 599 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-210ENST00000561817 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-210ENST00000561817 NLRP6P59044 892 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 MS4A4AQ96JQ5 239 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 KTN1Q86UP2 1357 aaKnown RBP8.97□□□□□ -0.97
CAPN3-210ENST00000561817 PARD3Q8TEW0 1356 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 TMEM2Q9UHN6 1383 aa8.97□□□□□ -0.97
CAPN3-210ENST00000561817 YTHDC2Q9H6S0 1430 aaKnown RBP8.97□□□□□ -0.97
CAPN3-210ENST00000561817 STRCQ7RTU9 1775 aa8.96□□□□□ -0.97
CAPN3-210ENST00000561817 ARHGAP23Q9P227 1491 aa8.96□□□□□ -0.97
CAPN3-210ENST00000561817 DLC1Q96QB1 1528 aa8.96□□□□□ -0.97
CAPN3-210ENST00000561817 TULP4Q9NRJ4 1543 aa8.96□□□□□ -0.97
CAPN3-210ENST00000561817 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
CAPN3-210ENST00000561817 ZNF710Q8N1W2 664 aa8.96□□□□□ -0.98
CAPN3-210ENST00000561817 PANK3Q9H999 370 aa8.96□□□□□ -0.98
CAPN3-210ENST00000561817 TRAK1Q9UPV9 953 aa8.96□□□□□ -0.98
CAPN3-210ENST00000561817 STK24Q9Y6E0 443 aa8.96□□□□□ -0.98
CAPN3-210ENST00000561817 SLIT1O75093 1534 aa8.95□□□□□ -0.98
CAPN3-210ENST00000561817 PUS7Q96PZ0 661 aaKnown RBP8.95□□□□□ -0.98
CAPN3-210ENST00000561817 LRPPRCP42704 1394 aaKnown RBP8.95□□□□□ -0.98
CAPN3-210ENST00000561817 MED14O60244 1454 aa8.95□□□□□ -0.98
CAPN3-210ENST00000561817 FAM205CA6NFA0 338 aa8.94□□□□□ -0.98
CAPN3-210ENST00000561817 STK25O00506 426 aa8.94□□□□□ -0.98
CAPN3-210ENST00000561817 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.94□□□□□ -0.98
CAPN3-210ENST00000561817 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
CAPN3-210ENST00000561817 ADAMTS13Q76LX8 1427 aa8.94□□□□□ -0.98
CAPN3-210ENST00000561817 RIMBP2O15034 1052 aa8.93□□□□□ -0.98
CAPN3-210ENST00000561817 RALBP1Q15311 655 aa8.93□□□□□ -0.98
CAPN3-210ENST00000561817 ABCC11Q96J66 1382 aa8.93□□□□□ -0.98
CAPN3-210ENST00000561817 TECPR2O15040 1411 aa8.93□□□□□ -0.98
CAPN3-210ENST00000561817 KNDC1Q76NI1 1749 aa8.93□□□□□ -0.98
CAPN3-210ENST00000561817 METP08581 1390 aa8.92□□□□□ -0.98
CAPN3-210ENST00000561817 PLEKHG1Q9ULL1 1385 aa8.92□□□□□ -0.98
CAPN3-210ENST00000561817 LTKP29376 864 aa8.92□□□□□ -0.98
CAPN3-210ENST00000561817 HS3ST6Q96QI5 342 aa8.92□□□□□ -0.98
CAPN3-210ENST00000561817 CARD14Q9BXL6 1004 aa8.92□□□□□ -0.98
CAPN3-210ENST00000561817 BRD4O60885 1362 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-210ENST00000561817 MYBBP1AQ9BQG0 1328 aaKnown RBP8.91□□□□□ -0.98
CAPN3-210ENST00000561817 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-210ENST00000561817 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
CAPN3-210ENST00000561817 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
CAPN3-210ENST00000561817 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
CAPN3-210ENST00000561817 CPS1P31327 1500 aa8.9□□□□□ -0.98
CAPN3-210ENST00000561817 PNISRQ8TF01 805 aaKnown RBP8.9□□□□□ -0.98
CAPN3-210ENST00000561817 MRS2Q9HD23 443 aa8.9□□□□□ -0.98
CAPN3-210ENST00000561817 STK26Q9P289 416 aa8.9□□□□□ -0.98
CAPN3-210ENST00000561817 FAM135BQ49AJ0 1406 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 PLEKHH1Q9ULM0 1364 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 RGL2O15211 777 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms