RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 CABLES1Q8TDN4 633 aa32.76■■■□□ 2.83
SMPD3-202ENST00000561749 USP6P35125 1406 aa32.76■■■□□ 2.83
SMPD3-202ENST00000561749 MON2Q7Z3U7 1717 aa32.74■■■□□ 2.83
SMPD3-202ENST00000561749 SLC12A5Q9H2X9 1139 aa32.74■■■□□ 2.83
SMPD3-202ENST00000561749 PUS7Q96PZ0 661 aaKnown RBP32.73■■■□□ 2.83
SMPD3-202ENST00000561749 CRYBG1Q9Y4K1 1723 aa32.72■■■□□ 2.83
SMPD3-202ENST00000561749 NUTM2GQ5VZR2 741 aa32.72■■■□□ 2.83
SMPD3-202ENST00000561749 CPSF1Q10570 1443 aaKnown RBP32.7■■■□□ 2.83
SMPD3-202ENST00000561749 CD163L1Q9NR16 1453 aa32.7■■■□□ 2.83
SMPD3-202ENST00000561749 HAP1P54257 671 aaPredicted RBP32.7■■■□□ 2.83
SMPD3-202ENST00000561749 C8orf37Q96NL8 207 aa32.7■■■□□ 2.83
SMPD3-202ENST00000561749 NRKQ7Z2Y5 1582 aa32.7■■■□□ 2.82
SMPD3-202ENST00000561749 KTN1Q86UP2 1357 aaKnown RBP32.69■■■□□ 2.82
SMPD3-202ENST00000561749 RGS17Q9UGC6 210 aaPredicted RBP32.68■■■□□ 2.82
SMPD3-202ENST00000561749 PHRF1Q9P1Y6 1649 aaKnown RBP32.66■■■□□ 2.82
SMPD3-202ENST00000561749 ABTB2Q8N961 1025 aa32.66■■■□□ 2.82
SMPD3-202ENST00000561749 ZNF692Q9BU19 519 aaPredicted RBP32.66■■■□□ 2.82
SMPD3-202ENST00000561749 SSH2Q76I76 1423 aa32.66■■■□□ 2.82
SMPD3-202ENST00000561749 PIK3C2AO00443 1686 aa32.66■■■□□ 2.82
SMPD3-202ENST00000561749 MYOM1P52179 1685 aa32.66■■■□□ 2.82
SMPD3-202ENST00000561749 CDCA8Q53HL2 280 aa32.65■■■□□ 2.82
SMPD3-202ENST00000561749 BRD4O60885 1362 aaPredicted RBP32.64■■■□□ 2.82
SMPD3-202ENST00000561749 HDGFL2Q7Z4V5 671 aaPredicted RBP32.64■■■□□ 2.82
SMPD3-202ENST00000561749 A0A1W2PP64 1363 aa32.63■■■□□ 2.81
SMPD3-202ENST00000561749 AFF2P51816 1311 aa32.63■■■□□ 2.81
SMPD3-202ENST00000561749 POLR3GLQ9BT43 218 aa32.63■■■□□ 2.81
SMPD3-202ENST00000561749 NINLQ9Y2I6 1382 aa32.62■■■□□ 2.81
SMPD3-202ENST00000561749 TTC21BQ7Z4L5 1316 aa32.62■■■□□ 2.81
SMPD3-202ENST00000561749 NGLY1Q96IV0 654 aa32.62■■■□□ 2.81
SMPD3-202ENST00000561749 TERF2IPQ9NYB0 399 aa32.61■■■□□ 2.81
SMPD3-202ENST00000561749 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.58■■■□□ 2.81
SMPD3-202ENST00000561749 POTEAQ6S8J7 498 aa32.56■■■□□ 2.8
SMPD3-202ENST00000561749 PLCH1Q4KWH8 1693 aa32.56■■■□□ 2.8
SMPD3-202ENST00000561749 NLRP6P59044 892 aa32.55■■■□□ 2.8
SMPD3-202ENST00000561749 NLRP13Q86W25 1043 aa32.55■■■□□ 2.8
SMPD3-202ENST00000561749 TTC21AQ8NDW8 1320 aa32.54■■■□□ 2.8
SMPD3-202ENST00000561749 EDC4Q6P2E9 1401 aaKnown RBP32.54■■■□□ 2.8
SMPD3-202ENST00000561749 ANKRD36BQ8N2N9 1353 aa32.54■■■□□ 2.8
SMPD3-202ENST00000561749 C11orf95C9JLR9 678 aaPredicted RBP32.53■■■□□ 2.8
SMPD3-202ENST00000561749 ILDR2Q71H61 639 aa32.53■■■□□ 2.8
SMPD3-202ENST00000561749 USP19O94966 1318 aa32.52■■■□□ 2.8
SMPD3-202ENST00000561749 ZNF772Q68DY9 489 aaPredicted RBP32.52■■■□□ 2.8
SMPD3-202ENST00000561749 ZRANB1Q9UGI0 708 aa32.51■■■□□ 2.79
SMPD3-202ENST00000561749 NME9Q86XW9 330 aa32.5■■■□□ 2.79
SMPD3-202ENST00000561749 USP21Q9UK80 565 aa32.5■■■□□ 2.79
SMPD3-202ENST00000561749 COL14A1Q05707 1796 aaKnown RBP32.49■■■□□ 2.79
SMPD3-202ENST00000561749 FAM83GA6ND36 823 aa32.48■■■□□ 2.79
SMPD3-202ENST00000561749 ZC3H6P61129 1189 aaKnown RBP32.48■■■□□ 2.79
SMPD3-202ENST00000561749 FNBP4Q8N3X1 1017 aaPredicted RBP32.48■■■□□ 2.79
SMPD3-202ENST00000561749 SLIT3O75094 1523 aa32.47■■■□□ 2.79
SMPD3-202ENST00000561749 SLIT2O94813 1529 aa32.46■■■□□ 2.79
SMPD3-202ENST00000561749 KIAA0232Q92628 1395 aa32.46■■■□□ 2.79
SMPD3-202ENST00000561749 NWD2Q9ULI1 1742 aa32.46■■■□□ 2.79
SMPD3-202ENST00000561749 USP54Q70EL1 1684 aa32.46■■■□□ 2.79
SMPD3-202ENST00000561749 PRDM11Q9NQV5 511 aa32.45■■■□□ 2.79
SMPD3-202ENST00000561749 BCL9LQ86UU0 1499 aa32.45■■■□□ 2.79
SMPD3-202ENST00000561749 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.45■■■□□ 2.78
SMPD3-202ENST00000561749 GCP02774 474 aa32.44■■■□□ 2.78
SMPD3-202ENST00000561749 KIF20BQ96Q89 1820 aa32.43■■■□□ 2.78
SMPD3-202ENST00000561749 SOX12O15370 315 aa32.43■■■□□ 2.78
SMPD3-202ENST00000561749 CHRNA2Q15822 529 aa32.43■■■□□ 2.78
SMPD3-202ENST00000561749 QTRT2Q9H974 415 aaKnown RBP32.42■■■□□ 2.78
SMPD3-202ENST00000561749 NRAPQ86VF7 1730 aa32.42■■■□□ 2.78
SMPD3-202ENST00000561749 ZBTB7CA1YPR0 619 aa32.41■■■□□ 2.78
SMPD3-202ENST00000561749 KIF7Q2M1P5 1343 aa32.41■■■□□ 2.78
SMPD3-202ENST00000561749 USP31Q70CQ4 1352 aa32.4■■■□□ 2.78
SMPD3-202ENST00000561749 CARD14Q9BXL6 1004 aa32.39■■■□□ 2.78
SMPD3-202ENST00000561749 NSD3Q9BZ95 1437 aa32.38■■■□□ 2.77
SMPD3-202ENST00000561749 ATRNO75882 1429 aa32.37■■■□□ 2.77
SMPD3-202ENST00000561749 UNC5CLQ8IV45 518 aa32.37■■■□□ 2.77
SMPD3-202ENST00000561749 BTG4Q9NY30 223 aa32.37■■■□□ 2.77
SMPD3-202ENST00000561749 TRPC5Q9UL62 973 aaPredicted RBP32.37■■■□□ 2.77
SMPD3-202ENST00000561749 NFAT5O94916 1531 aa32.36■■■□□ 2.77
SMPD3-202ENST00000561749 OVOS2A0A0J9YW53 1432 aa32.35■■■□□ 2.77
SMPD3-202ENST00000561749 OVOS2Q6IE36 1432 aa32.35■■■□□ 2.77
SMPD3-202ENST00000561749 CPDO75976 1380 aa32.35■■■□□ 2.77
SMPD3-202ENST00000561749 LMO7Q8WWI1 1683 aa32.34■■■□□ 2.77
SMPD3-202ENST00000561749 LTN1O94822 1766 aa32.33■■■□□ 2.77
SMPD3-202ENST00000561749 RXRBP28702 533 aa32.33■■■□□ 2.77
SMPD3-202ENST00000561749 KCNH5Q8NCM2 988 aa32.33■■■□□ 2.77
SMPD3-202ENST00000561749 RGPD5Q99666 1765 aa32.32■■■□□ 2.77
SMPD3-202ENST00000561749 GGNBP2Q9H3C7 697 aa32.32■■■□□ 2.76
SMPD3-202ENST00000561749 PANK3Q9H999 370 aa32.31■■■□□ 2.76
SMPD3-202ENST00000561749 COL18A1P39060 1754 aa32.31■■■□□ 2.76
SMPD3-202ENST00000561749 FYB1O15117 783 aa32.3■■■□□ 2.76
SMPD3-202ENST00000561749 COG3Q96JB2 828 aa32.3■■■□□ 2.76
SMPD3-202ENST00000561749 CAMTA1Q9Y6Y1 1673 aa32.3■■■□□ 2.76
SMPD3-202ENST00000561749 CCDC7Q96M83 1385 aa32.3■■■□□ 2.76
SMPD3-202ENST00000561749 RBM6P78332 1123 aaKnown RBP32.29■■■□□ 2.76
SMPD3-202ENST00000561749 CCDC9Q9Y3X0 531 aaKnown RBP32.29■■■□□ 2.76
SMPD3-202ENST00000561749 GLI3P10071 1580 aa32.28■■■□□ 2.76
SMPD3-202ENST00000561749 WASHC2AQ641Q2 1341 aa32.27■■■□□ 2.76
SMPD3-202ENST00000561749 ZEB1P37275 1124 aaPredicted RBP32.27■■■□□ 2.76
SMPD3-202ENST00000561749 STRN4Q9NRL3 753 aa32.27■■■□□ 2.76
SMPD3-202ENST00000561749 ARHGEF25Q86VW2 580 aa32.26■■■□□ 2.75
SMPD3-202ENST00000561749 VPS72Q15906 364 aa32.25■■■□□ 2.75
SMPD3-202ENST00000561749 GJD4Q96KN9 370 aaPredicted RBP32.25■■■□□ 2.75
SMPD3-202ENST00000561749 AATKQ6ZMQ8 1374 aa32.23■■■□□ 2.75
SMPD3-202ENST00000561749 FBLN1P23142 703 aa32.22■■■□□ 2.75
SMPD3-202ENST00000561749 ANKRD26Q9UPS8 1709 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms