RNA–Protein interactions for RNA: ENST00000561722.5

FANCA-208, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-208ENST00000561722 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
FANCA-208ENST00000561722 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
FANCA-208ENST00000561722 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
FANCA-208ENST00000561722 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
FANCA-208ENST00000561722 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
FANCA-208ENST00000561722 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
FANCA-208ENST00000561722 AKAP12Q02952 1782 aa17.21■□□□□ 0.35
FANCA-208ENST00000561722 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
FANCA-208ENST00000561722 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
FANCA-208ENST00000561722 RGS17Q9UGC6 210 aaPredicted RBP17.2■□□□□ 0.34
FANCA-208ENST00000561722 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
FANCA-208ENST00000561722 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
FANCA-208ENST00000561722 PUS7Q96PZ0 661 aaKnown RBP17.19■□□□□ 0.34
FANCA-208ENST00000561722 USP6P35125 1406 aa17.19■□□□□ 0.34
FANCA-208ENST00000561722 MYOM1P52179 1685 aa17.19■□□□□ 0.34
FANCA-208ENST00000561722 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
FANCA-208ENST00000561722 A0A1W2PP64 1363 aa17.18■□□□□ 0.34
FANCA-208ENST00000561722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
FANCA-208ENST00000561722 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
FANCA-208ENST00000561722 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
FANCA-208ENST00000561722 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
FANCA-208ENST00000561722 MEX3CQ5U5Q3 659 aaKnown RBP17.17■□□□□ 0.34
FANCA-208ENST00000561722 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
FANCA-208ENST00000561722 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
FANCA-208ENST00000561722 LRP6O75581 1613 aa17.17■□□□□ 0.34
FANCA-208ENST00000561722 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
FANCA-208ENST00000561722 ADAMTS2O95450 1211 aa17.16■□□□□ 0.34
FANCA-208ENST00000561722 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
FANCA-208ENST00000561722 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
FANCA-208ENST00000561722 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
FANCA-208ENST00000561722 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
FANCA-208ENST00000561722 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
FANCA-208ENST00000561722 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
FANCA-208ENST00000561722 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
FANCA-208ENST00000561722 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
FANCA-208ENST00000561722 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
FANCA-208ENST00000561722 TTC21BQ7Z4L5 1316 aa17.14■□□□□ 0.33
FANCA-208ENST00000561722 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
FANCA-208ENST00000561722 PIK3C2AO00443 1686 aa17.12■□□□□ 0.33
FANCA-208ENST00000561722 ABCA3Q99758 1704 aa17.12■□□□□ 0.33
FANCA-208ENST00000561722 NLRP6P59044 892 aa17.11■□□□□ 0.33
FANCA-208ENST00000561722 NME9Q86XW9 330 aa17.11■□□□□ 0.33
FANCA-208ENST00000561722 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
FANCA-208ENST00000561722 SSH2Q76I76 1423 aa17.11■□□□□ 0.33
FANCA-208ENST00000561722 SOX12O15370 315 aa17.1■□□□□ 0.33
FANCA-208ENST00000561722 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
FANCA-208ENST00000561722 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
FANCA-208ENST00000561722 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
FANCA-208ENST00000561722 ZBTB7CA1YPR0 619 aa17.09■□□□□ 0.33
FANCA-208ENST00000561722 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
FANCA-208ENST00000561722 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
FANCA-208ENST00000561722 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.32
FANCA-208ENST00000561722 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 POTEAQ6S8J7 498 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 PANK3Q9H999 370 aa17.08■□□□□ 0.32
FANCA-208ENST00000561722 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
FANCA-208ENST00000561722 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
FANCA-208ENST00000561722 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
FANCA-208ENST00000561722 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
FANCA-208ENST00000561722 USP19O94966 1318 aa17.04■□□□□ 0.32
FANCA-208ENST00000561722 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
FANCA-208ENST00000561722 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
FANCA-208ENST00000561722 AFF2P51816 1311 aa17.03■□□□□ 0.32
FANCA-208ENST00000561722 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
FANCA-208ENST00000561722 GCP02774 474 aa17.02■□□□□ 0.32
FANCA-208ENST00000561722 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
FANCA-208ENST00000561722 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
FANCA-208ENST00000561722 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
FANCA-208ENST00000561722 COG3Q96JB2 828 aa17.01■□□□□ 0.31
FANCA-208ENST00000561722 SLIT3O75094 1523 aa17.01■□□□□ 0.31
FANCA-208ENST00000561722 FYB1O15117 783 aa17■□□□□ 0.31
FANCA-208ENST00000561722 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
FANCA-208ENST00000561722 USP31Q70CQ4 1352 aa17■□□□□ 0.31
FANCA-208ENST00000561722 OVOS2A0A0J9YW53 1432 aa16.99■□□□□ 0.31
FANCA-208ENST00000561722 OVOS2Q6IE36 1432 aa16.99■□□□□ 0.31
FANCA-208ENST00000561722 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
FANCA-208ENST00000561722 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
FANCA-208ENST00000561722 FBLN1P23142 703 aa16.98■□□□□ 0.31
FANCA-208ENST00000561722 USP21Q9UK80 565 aa16.98■□□□□ 0.31
FANCA-208ENST00000561722 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
FANCA-208ENST00000561722 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
FANCA-208ENST00000561722 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
FANCA-208ENST00000561722 KCNH5Q8NCM2 988 aa16.96■□□□□ 0.31
FANCA-208ENST00000561722 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
FANCA-208ENST00000561722 NFAT5O94916 1531 aa16.96■□□□□ 0.3
FANCA-208ENST00000561722 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
FANCA-208ENST00000561722 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
FANCA-208ENST00000561722 ZNF772Q68DY9 489 aaPredicted RBP16.94■□□□□ 0.3
FANCA-208ENST00000561722 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
FANCA-208ENST00000561722 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
FANCA-208ENST00000561722 LTN1O94822 1766 aa16.94■□□□□ 0.3
FANCA-208ENST00000561722 CPDO75976 1380 aa16.93■□□□□ 0.3
FANCA-208ENST00000561722 SLIT2O94813 1529 aa16.93■□□□□ 0.3
FANCA-208ENST00000561722 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
FANCA-208ENST00000561722 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
FANCA-208ENST00000561722 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
FANCA-208ENST00000561722 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms