RNA–Protein interactions for RNA: ENST00000561426.1

PPP1R3E-208, Transcript of protein phosphatase 1 regulatory subunit 3E, human

TSL 2

Gene PPP1R3E, Length 458 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R3E-208	ENST00000561426	TUSC1	Q2TAM9	212 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	LINC01559	Q495D7	138 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	MYSM1	Q5VVJ2	828 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	ZNF511	Q8NB15	262 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	CABLES1	Q8TDN4	633 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	ATP13A2	Q9NQ11	1180 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	LIMD1	Q9UGP4	676 aa		5.01	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	VARS	P26640	1264 aa	Known RBP	5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	CTH	P32929	405 aa		5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	CSPP1	Q1MSJ5	1256 aa		5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	C14orf37	Q86TY3	774 aa		5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	SENP2	Q9HC62	589 aa		5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	WASF2	Q9Y6W5	498 aa		5	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	NUTM2E	B1AL46	878 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	LILRB3	O75022	631 aa		4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	F12	P00748	615 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	TREML4	Q6UXN2	200 aa		4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	MPND	Q8N594	471 aa		4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	ARX	Q96QS3	562 aa		4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	RSPH6A	Q9H0K4	717 aa		4.99	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	PLEKHG3	A1L390	1219 aa		4.98	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	QPCT	Q16769	361 aa		4.98	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	ERICH6	Q7L0X2	663 aa		4.98	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	TRIM47	Q96LD4	638 aa		4.98	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	MAP10	Q9P2G4	905 aa		4.98	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	CAPN5	O15484	640 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	PER1	O15534	1290 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	SNRPB	P14678	240 aa	Known RBP	4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	CLK2	P49760	499 aa	Known RBP	4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	LCE2A	Q5TA79	106 aa	Predicted RBP	4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	TSC1	Q92574	1164 aa		4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	KIFC2	Q96AC6	838 aa		4.97	□□□□□ -1.61
PPP1R3E-208	ENST00000561426	NEUROD2	Q15784	382 aa		4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	RTL5	Q5HYW3	569 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	HELB	Q8NG08	1087 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	FAM174A	Q8TBP5	190 aa		4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	POLR3E	Q9NVU0	708 aa		4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	TLL2	Q9Y6L7	1015 aa		4.96	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	WFS1	O76024	890 aa		4.95	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	ARMC2	Q8NEN0	867 aa		4.95	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	FOXJ1	Q92949	421 aa		4.95	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	BMP1	P13497	986 aa		4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	NFX1	Q12986	1120 aa	Known RBP	4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	NNT	Q13423	1086 aa		4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	AGER	Q15109	404 aa		4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	TRIM46	Q7Z4K8	759 aa		4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	BPHL	Q86WA6	291 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	CDK15	Q96Q40	435 aa		4.94	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	ADH1C	P00326	375 aa		4.93	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	SKIV2L	Q15477	1246 aa	Known RBP	4.93	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	C4orf48	Q5BLP8	95 aa		4.93	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	NBPF14	Q5TI25	921 aa		4.93	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	KDM4C	Q9H3R0	1056 aa		4.93	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	TERT	O14746	1132 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	TIMP2	P16035	220 aa		4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	WDR4	P57081	412 aa	Known RBP	4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	NR5A1	Q13285	461 aa		4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	ARID5B	Q14865	1188 aa		4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	DDRGK1	Q96HY6	314 aa		4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	KLF16	Q9BXK1	252 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	GPBP1L1	Q9HC44	474 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	GRM5	P41594	1212 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	CTDSPL2	Q05D32	466 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	SH3D19	Q5HYK7	790 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	SH3RF1	Q7Z6J0	888 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	C1QTNF2	Q9BXJ5	285 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	FAM117A	Q9C073	453 aa		4.91	□□□□□ -1.62
PPP1R3E-208	ENST00000561426	SUPT5H	O00267	1087 aa	Known RBP	4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	NR3C2	P08235	984 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	SCARF1	Q14162	830 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	PPP2R2D	Q66LE6	453 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	MRPL14	Q6P1L8	145 aa	Known RBP	4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	SH3BP5L	Q7L8J4	393 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	HOMEZ	Q8IX15	550 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	ZFP42	Q96MM3	310 aa		4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	MAGEB6P1	A0A0J9YX57	407 aa		4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	WIPF1	O43516	503 aa		4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	ZIC2	O95409	532 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	TRMT44	Q8IYL2	757 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	ZFAND3	Q9H8U3	227 aa		4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	NXF1	Q9UBU9	619 aa	Known RBP	4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	MAP4K5	Q9Y4K4	846 aa		4.89	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	LCE2C	Q5TA81	110 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	PDXDC2P	Q6P474	469 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	VASH1	Q7L8A9	365 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	NPAS3	Q8IXF0	933 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	SLC16A10	Q8TF71	515 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	LRRN4	Q8WUT4	740 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	ITPKC	Q96DU7	683 aa		4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	PURB	Q96QR8	312 aa	Known RBP	4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	FSHR	P23945	695 aa		4.87	□□□□□ -1.63
PPP1R3E-208	ENST00000561426	NR6A1	Q15406	480 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms