RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
TPM1-229ENST00000561242 SOX12O15370 315 aa14.65□□□□□ -0.06
TPM1-229ENST00000561242 CCDC9Q9Y3X0 531 aaKnown RBP14.65□□□□□ -0.06
TPM1-229ENST00000561242 TNS3Q68CZ2 1445 aa14.65□□□□□ -0.06
TPM1-229ENST00000561242 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
TPM1-229ENST00000561242 XIRP1Q702N8 1843 aaKnown RBP14.64□□□□□ -0.07
TPM1-229ENST00000561242 ATP7BP35670 1465 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 PHLPP1O60346 1717 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 PRDM11Q9NQV5 511 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 KIF1AQ12756 1690 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
TPM1-229ENST00000561242 FMN2Q9NZ56 1722 aa14.63□□□□□ -0.07
TPM1-229ENST00000561242 PNPLA6Q8IY17 1366 aa14.63□□□□□ -0.07
TPM1-229ENST00000561242 CABLES1Q8TDN4 633 aa14.63□□□□□ -0.07
TPM1-229ENST00000561242 PANK3Q9H999 370 aa14.63□□□□□ -0.07
TPM1-229ENST00000561242 AHDC1Q5TGY3 1603 aaPredicted RBP14.63□□□□□ -0.07
TPM1-229ENST00000561242 ANKRD36BQ8N2N9 1353 aa14.62□□□□□ -0.07
TPM1-229ENST00000561242 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
TPM1-229ENST00000561242 USP6P35125 1406 aa14.6□□□□□ -0.07
TPM1-229ENST00000561242 USP21Q9UK80 565 aa14.6□□□□□ -0.07
TPM1-229ENST00000561242 GCP02774 474 aa14.59□□□□□ -0.07
TPM1-229ENST00000561242 CSB-PGBD3P0DP91 1061 aa14.59□□□□□ -0.07
TPM1-229ENST00000561242 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
TPM1-229ENST00000561242 KIF7Q2M1P5 1343 aa14.59□□□□□ -0.07
TPM1-229ENST00000561242 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.07
TPM1-229ENST00000561242 A0A0G2JS52 829 aa14.58□□□□□ -0.08
TPM1-229ENST00000561242 AMPHP49418 695 aa14.58□□□□□ -0.08
TPM1-229ENST00000561242 MYT1Q01538 1121 aa14.58□□□□□ -0.08
TPM1-229ENST00000561242 MORC1Q86VD1 984 aa14.58□□□□□ -0.08
TPM1-229ENST00000561242 NME9Q86XW9 330 aa14.58□□□□□ -0.08
TPM1-229ENST00000561242 TRPC5Q9UL62 973 aaPredicted RBP14.57□□□□□ -0.08
TPM1-229ENST00000561242 ITSN1Q15811 1721 aa14.57□□□□□ -0.08
TPM1-229ENST00000561242 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
TPM1-229ENST00000561242 PXDNQ92626 1479 aa14.57□□□□□ -0.08
TPM1-229ENST00000561242 GGNBP2Q9H3C7 697 aa14.56□□□□□ -0.08
TPM1-229ENST00000561242 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
TPM1-229ENST00000561242 STRN4Q9NRL3 753 aa14.56□□□□□ -0.08
TPM1-229ENST00000561242 PPM1GO15355 546 aaPredicted RBP14.55□□□□□ -0.08
TPM1-229ENST00000561242 AFF2P51816 1311 aa14.55□□□□□ -0.08
TPM1-229ENST00000561242 CPSF1Q10570 1443 aaKnown RBP14.55□□□□□ -0.08
TPM1-229ENST00000561242 ZNF316A6NFI3 1004 aaPredicted RBP14.54□□□□□ -0.08
TPM1-229ENST00000561242 RXRBP28702 533 aa14.54□□□□□ -0.08
TPM1-229ENST00000561242 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
TPM1-229ENST00000561242 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
TPM1-229ENST00000561242 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
TPM1-229ENST00000561242 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
TPM1-229ENST00000561242 TNNT2P45379 298 aaPredicted RBP14.53□□□□□ -0.08
TPM1-229ENST00000561242 UNC5CLQ8IV45 518 aa14.53□□□□□ -0.08
TPM1-229ENST00000561242 FAM83GA6ND36 823 aa14.52□□□□□ -0.09
TPM1-229ENST00000561242 FYB1O15117 783 aa14.52□□□□□ -0.09
TPM1-229ENST00000561242 CHRNA2Q15822 529 aa14.52□□□□□ -0.09
TPM1-229ENST00000561242 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
TPM1-229ENST00000561242 NHSL1Q5SYE7 1610 aa14.51□□□□□ -0.09
TPM1-229ENST00000561242 WASHC2AQ641Q2 1341 aa14.5□□□□□ -0.09
TPM1-229ENST00000561242 DDX10Q13206 875 aaKnown RBP14.5□□□□□ -0.09
TPM1-229ENST00000561242 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
TPM1-229ENST00000561242 TOM1L2Q6ZVM7 507 aa14.5□□□□□ -0.09
TPM1-229ENST00000561242 USP32Q8NFA0 1604 aa14.5□□□□□ -0.09
TPM1-229ENST00000561242 KIAA0232Q92628 1395 aa14.49□□□□□ -0.09
TPM1-229ENST00000561242 RBM6P78332 1123 aaKnown RBP14.49□□□□□ -0.09
TPM1-229ENST00000561242 FNBP4Q8N3X1 1017 aaPredicted RBP14.49□□□□□ -0.09
TPM1-229ENST00000561242 CARD14Q9BXL6 1004 aa14.49□□□□□ -0.09
TPM1-229ENST00000561242 ZRANB1Q9UGI0 708 aa14.49□□□□□ -0.09
TPM1-229ENST00000561242 NSD2O96028 1365 aa14.48□□□□□ -0.09
TPM1-229ENST00000561242 USP31Q70CQ4 1352 aa14.48□□□□□ -0.09
TPM1-229ENST00000561242 USP19O94966 1318 aa14.48□□□□□ -0.09
TPM1-229ENST00000561242 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
TPM1-229ENST00000561242 USP35Q9P2H5 1018 aa14.48□□□□□ -0.09
TPM1-229ENST00000561242 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
TPM1-229ENST00000561242 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
TPM1-229ENST00000561242 ARHGEF25Q86VW2 580 aa14.46□□□□□ -0.09
TPM1-229ENST00000561242 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
TPM1-229ENST00000561242 VPS72Q15906 364 aa14.45□□□□□ -0.1
TPM1-229ENST00000561242 SMG6Q86US8 1419 aaKnown RBP14.45□□□□□ -0.1
TPM1-229ENST00000561242 GJD4Q96KN9 370 aaPredicted RBP14.45□□□□□ -0.1
TPM1-229ENST00000561242 CPDO75976 1380 aa14.45□□□□□ -0.1
TPM1-229ENST00000561242 SSH2Q76I76 1423 aa14.44□□□□□ -0.1
TPM1-229ENST00000561242 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
TPM1-229ENST00000561242 IP6K1Q92551 441 aa14.44□□□□□ -0.1
TPM1-229ENST00000561242 SHPRHQ149N8 1683 aa14.44□□□□□ -0.1
TPM1-229ENST00000561242 PDE3BQ13370 1112 aa14.43□□□□□ -0.1
TPM1-229ENST00000561242 ANKRD24Q8TF21 1146 aa14.43□□□□□ -0.1
TPM1-229ENST00000561242 AATKQ6ZMQ8 1374 aa14.43□□□□□ -0.1
TPM1-229ENST00000561242 MED1Q15648 1581 aaPredicted RBP14.43□□□□□ -0.1
TPM1-229ENST00000561242 TOPAZ1Q8N9V7 1692 aa14.42□□□□□ -0.1
TPM1-229ENST00000561242 NEFMP07197 916 aa14.42□□□□□ -0.1
TPM1-229ENST00000561242 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
TPM1-229ENST00000561242 NUDCQ9Y266 331 aa14.42□□□□□ -0.1
TPM1-229ENST00000561242 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
TPM1-229ENST00000561242 CD163L1Q9NR16 1453 aa14.42□□□□□ -0.1
TPM1-229ENST00000561242 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
TPM1-229ENST00000561242 ANP32CO43423 234 aa14.4□□□□□ -0.1
TPM1-229ENST00000561242 LRP6O75581 1613 aa14.4□□□□□ -0.1
TPM1-229ENST00000561242 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
TPM1-229ENST00000561242 HOXC9P31274 260 aa14.39□□□□□ -0.11
TPM1-229ENST00000561242 SF3B2Q13435 895 aaKnown RBP14.39□□□□□ -0.11
TPM1-229ENST00000561242 RALBP1Q15311 655 aa14.39□□□□□ -0.11
TPM1-229ENST00000561242 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
TPM1-229ENST00000561242 LARP1Q6PKG0 1096 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms