RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 PPIP5K1Q6PFW1 1433 aa19.1■□□□□ 0.65
SHF-210ENST00000561239 ST20-MTHFSA0A0A6YYL1 179 aa19.1■□□□□ 0.65
SHF-210ENST00000561239 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
SHF-210ENST00000561239 TRPM3Q9HCF6 1732 aaPredicted RBP19.1■□□□□ 0.65
SHF-210ENST00000561239 MARF1Q9Y4F3 1742 aaKnown RBP19.09■□□□□ 0.65
SHF-210ENST00000561239 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
SHF-210ENST00000561239 BRD4O60885 1362 aaPredicted RBP19.08■□□□□ 0.65
SHF-210ENST00000561239 CABLES1Q8TDN4 633 aa19.08■□□□□ 0.64
SHF-210ENST00000561239 ALS2Q96Q42 1657 aa19.07■□□□□ 0.64
SHF-210ENST00000561239 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
SHF-210ENST00000561239 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
SHF-210ENST00000561239 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
SHF-210ENST00000561239 CABP1Q9NZU7 370 aa19.06■□□□□ 0.64
SHF-210ENST00000561239 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
SHF-210ENST00000561239 ZNF692Q9BU19 519 aaPredicted RBP19.05■□□□□ 0.64
SHF-210ENST00000561239 BCL9LQ86UU0 1499 aa19.04■□□□□ 0.64
SHF-210ENST00000561239 SLIT2O94813 1529 aa19.04■□□□□ 0.64
SHF-210ENST00000561239 ATRNO75882 1429 aa19.03■□□□□ 0.64
SHF-210ENST00000561239 ABTB2Q8N961 1025 aa19.03■□□□□ 0.64
SHF-210ENST00000561239 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
SHF-210ENST00000561239 FAM83GA6ND36 823 aa19■□□□□ 0.63
SHF-210ENST00000561239 NLRP13Q86W25 1043 aa19■□□□□ 0.63
SHF-210ENST00000561239 GJD4Q96KN9 370 aaPredicted RBP19■□□□□ 0.63
SHF-210ENST00000561239 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
SHF-210ENST00000561239 USP6P35125 1406 aa19■□□□□ 0.63
SHF-210ENST00000561239 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHF-210ENST00000561239 NWD2Q9ULI1 1742 aa18.98■□□□□ 0.63
SHF-210ENST00000561239 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
SHF-210ENST00000561239 VPS72Q15906 364 aa18.97■□□□□ 0.63
SHF-210ENST00000561239 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
SHF-210ENST00000561239 RGS12O14924 1447 aa18.97■□□□□ 0.63
SHF-210ENST00000561239 CPSF1Q10570 1443 aaKnown RBP18.97■□□□□ 0.63
SHF-210ENST00000561239 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
SHF-210ENST00000561239 TMF1P82094 1093 aa18.96■□□□□ 0.63
SHF-210ENST00000561239 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
SHF-210ENST00000561239 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
SHF-210ENST00000561239 COL14A1Q05707 1796 aaKnown RBP18.96■□□□□ 0.63
SHF-210ENST00000561239 BTG4Q9NY30 223 aa18.95■□□□□ 0.62
SHF-210ENST00000561239 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
SHF-210ENST00000561239 CRYBG1Q9Y4K1 1723 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 NLRP6P59044 892 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
SHF-210ENST00000561239 TMC1Q8TDI8 760 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 PLCH1Q4KWH8 1693 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 USP19O94966 1318 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
SHF-210ENST00000561239 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
SHF-210ENST00000561239 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
SHF-210ENST00000561239 AKAP12Q02952 1782 aa18.93■□□□□ 0.62
SHF-210ENST00000561239 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
SHF-210ENST00000561239 GCP02774 474 aa18.92■□□□□ 0.62
SHF-210ENST00000561239 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
SHF-210ENST00000561239 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
SHF-210ENST00000561239 TTC21BQ7Z4L5 1316 aa18.92■□□□□ 0.62
SHF-210ENST00000561239 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
SHF-210ENST00000561239 NRKQ7Z2Y5 1582 aa18.91■□□□□ 0.62
SHF-210ENST00000561239 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
SHF-210ENST00000561239 CPDO75976 1380 aa18.91■□□□□ 0.62
SHF-210ENST00000561239 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
SHF-210ENST00000561239 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
SHF-210ENST00000561239 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
SHF-210ENST00000561239 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.61
SHF-210ENST00000561239 CHRNA2Q15822 529 aa18.88■□□□□ 0.61
SHF-210ENST00000561239 MYOM1P52179 1685 aa18.88■□□□□ 0.61
SHF-210ENST00000561239 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
SHF-210ENST00000561239 ONECUT3O60422 494 aaPredicted RBP18.87■□□□□ 0.61
SHF-210ENST00000561239 GLI3P10071 1580 aa18.87■□□□□ 0.61
SHF-210ENST00000561239 EVA1CP58658 441 aa18.87■□□□□ 0.61
SHF-210ENST00000561239 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
SHF-210ENST00000561239 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
SHF-210ENST00000561239 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
SHF-210ENST00000561239 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
SHF-210ENST00000561239 C11orf95C9JLR9 678 aaPredicted RBP18.85■□□□□ 0.61
SHF-210ENST00000561239 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
SHF-210ENST00000561239 PIK3C2AO00443 1686 aa18.85■□□□□ 0.61
SHF-210ENST00000561239 SLIT3O75094 1523 aa18.84■□□□□ 0.61
SHF-210ENST00000561239 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
SHF-210ENST00000561239 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.61
SHF-210ENST00000561239 A0A0G2JS52 829 aa18.83■□□□□ 0.6
SHF-210ENST00000561239 MYT1Q01538 1121 aa18.83■□□□□ 0.6
SHF-210ENST00000561239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.83■□□□□ 0.6
SHF-210ENST00000561239 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
SHF-210ENST00000561239 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
SHF-210ENST00000561239 USP31Q70CQ4 1352 aa18.81■□□□□ 0.6
SHF-210ENST00000561239 FAM98CQ17RN3 349 aaKnown RBP18.81■□□□□ 0.6
SHF-210ENST00000561239 USP54Q70EL1 1684 aa18.81■□□□□ 0.6
SHF-210ENST00000561239 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
SHF-210ENST00000561239 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
SHF-210ENST00000561239 ZEB1P37275 1124 aaPredicted RBP18.8■□□□□ 0.6
SHF-210ENST00000561239 KRT27Q7Z3Y8 459 aa18.79■□□□□ 0.6
SHF-210ENST00000561239 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
SHF-210ENST00000561239 KIF7Q2M1P5 1343 aa18.78■□□□□ 0.6
SHF-210ENST00000561239 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
SHF-210ENST00000561239 THRAP3Q9Y2W1 955 aaKnown RBP18.78■□□□□ 0.6
SHF-210ENST00000561239 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
SHF-210ENST00000561239 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
SHF-210ENST00000561239 NME9Q86XW9 330 aa18.77■□□□□ 0.6
SHF-210ENST00000561239 SOX12O15370 315 aa18.76■□□□□ 0.59
SHF-210ENST00000561239 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
SHF-210ENST00000561239 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms